RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 SMRP1Q8NCR6 262 aa12.8□□□□□ -0.36
ECM1-202ENST00000369047 CSGALNACT1Q8TDX6 532 aa12.8□□□□□ -0.36
ECM1-202ENST00000369047 CCDC138Q96M89 665 aa12.8□□□□□ -0.36
ECM1-202ENST00000369047 FRG2BQ96QU4 278 aa12.8□□□□□ -0.36
ECM1-202ENST00000369047 RIOK2Q9BVS4 552 aaKnown RBP12.8□□□□□ -0.36
ECM1-202ENST00000369047 PIF1Q9H611 641 aa12.8□□□□□ -0.36
ECM1-202ENST00000369047 EPHX3Q9H6B9 360 aa12.8□□□□□ -0.36
ECM1-202ENST00000369047 CAAP1Q9H8G2 361 aa12.8□□□□□ -0.36
ECM1-202ENST00000369047 SLC24A3Q9HC58 644 aa12.8□□□□□ -0.36
ECM1-202ENST00000369047 MBD1Q9UIS9 605 aaPredicted RBP12.8□□□□□ -0.36
ECM1-202ENST00000369047 USP22Q9UPT9 525 aa12.8□□□□□ -0.36
ECM1-202ENST00000369047 SLC22A14Q9Y267 594 aa12.8□□□□□ -0.36
ECM1-202ENST00000369047 RANBP2P49792 3224 aaKnown RBP12.8□□□□□ -0.36
ECM1-202ENST00000369047 TRBV5-3A0A0A0MS03 114 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 H0YAE9 185 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 SGTAO43765 313 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 PRMT3O60678 531 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 IL1RNP18510 177 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 ETV3P41162 512 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 CSTF3Q12996 717 aaKnown RBP12.79□□□□□ -0.36
ECM1-202ENST00000369047 DYNC1I2Q13409 638 aaKnown RBP12.79□□□□□ -0.36
ECM1-202ENST00000369047 LRRC73Q5JTD7 316 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 CWF19L1Q69YN2 538 aaKnown RBP12.79□□□□□ -0.36
ECM1-202ENST00000369047 RBM44Q6ZP01 1051 aaKnown RBP12.79□□□□□ -0.36
ECM1-202ENST00000369047 TMEM132CQ8N3T6 1108 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 KRTCAP2Q8N6L1 136 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 ZNF548Q8NEK5 533 aaPredicted RBP12.79□□□□□ -0.36
ECM1-202ENST00000369047 OR10A6Q8NH74 314 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 GLMNQ92990 594 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 GRIP2Q9C0E4 1043 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 S1PR5Q9H228 398 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 INVSQ9Y283 1065 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 C16orf96A6NNT2 1141 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 EI24O14681 340 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 VILLO15195 856 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 MBTPS2O43462 519 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 ATG13O75143 517 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 BMP10O95393 424 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 RETP07949 1114 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 PRPS1L1P21108 318 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 WEE1P30291 646 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 CAPGP40121 348 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 HALP42357 657 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 DGKGP49619 791 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 PFN3P60673 137 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 ST8SIA6P61647 398 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 CHIT1Q13231 466 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 TTC33Q6PID6 262 aaPredicted RBP12.79□□□□□ -0.36
ECM1-202ENST00000369047 SERPINA13PQ6UXR4 307 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 CELF5Q8N6W0 485 aaKnown RBP12.79□□□□□ -0.36
ECM1-202ENST00000369047 NAT16Q8N8M0 369 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 CYB5D2Q8WUJ1 264 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 TMEM159Q96B96 161 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 VPS50Q96JG6 964 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 FCRL1Q96LA6 429 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 HHIPQ96QV1 700 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 CCM2Q9BSQ5 444 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 PAIP1Q9H074 479 aaKnown RBP12.79□□□□□ -0.36
ECM1-202ENST00000369047 RBM38Q9H0Z9 239 aaKnown RBP12.79□□□□□ -0.36
ECM1-202ENST00000369047 KAT8Q9H7Z6 458 aaKnown RBP12.79□□□□□ -0.36
ECM1-202ENST00000369047 SLC25A37Q9NYZ2 338 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 PTTG2Q9NZH5 202 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 ADGRE2Q9UHX3 823 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 SLC27A6Q9Y2P4 619 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 WNT6Q9Y6F9 365 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 DOCK6Q96HP0 2047 aa12.79□□□□□ -0.36
ECM1-202ENST00000369047 A0A087WXM4 84 aa12.78□□□□□ -0.36
ECM1-202ENST00000369047 FAM220BPB1ANY3 271 aa12.78□□□□□ -0.36
ECM1-202ENST00000369047 H0Y858 1186 aa12.78□□□□□ -0.36
ECM1-202ENST00000369047 H3BQ06 376 aaPredicted RBP12.78□□□□□ -0.36
ECM1-202ENST00000369047 CATP04040 527 aaKnown RBP12.78□□□□□ -0.36
ECM1-202ENST00000369047 CISD3P0C7P0 127 aa12.78□□□□□ -0.36
ECM1-202ENST00000369047 HSD3B1P14060 373 aa12.78□□□□□ -0.36
ECM1-202ENST00000369047 AMD1P17707 334 aa12.78□□□□□ -0.36
ECM1-202ENST00000369047 HSD3B2P26439 372 aa12.78□□□□□ -0.36
ECM1-202ENST00000369047 HNF4AP41235 474 aa12.78□□□□□ -0.36
ECM1-202ENST00000369047 ALDH3B2P48448 385 aa12.78□□□□□ -0.36
ECM1-202ENST00000369047 CCR3P51677 355 aa12.78□□□□□ -0.36
ECM1-202ENST00000369047 IRF8Q02556 426 aa12.78□□□□□ -0.36
ECM1-202ENST00000369047 SRSF11Q05519 484 aaKnown RBP12.78□□□□□ -0.36
ECM1-202ENST00000369047 DLX2Q07687 328 aaPredicted RBP12.78□□□□□ -0.36
ECM1-202ENST00000369047 ABRQ12979 859 aa12.78□□□□□ -0.36
ECM1-202ENST00000369047 LSAMPQ13449 338 aa12.78□□□□□ -0.36
ECM1-202ENST00000369047 MYBPC3Q14896 1274 aa12.78□□□□□ -0.36
ECM1-202ENST00000369047 DHCR24Q15392 516 aa12.78□□□□□ -0.36
ECM1-202ENST00000369047 TMC5Q6UXY8 1006 aa12.78□□□□□ -0.36
ECM1-202ENST00000369047 LIPIQ6XZB0 460 aa12.78□□□□□ -0.36
ECM1-202ENST00000369047 PATL1Q86TB9 770 aaKnown RBP12.78□□□□□ -0.36
ECM1-202ENST00000369047 GPR180Q86V85 440 aa12.78□□□□□ -0.36
ECM1-202ENST00000369047 MSRB3Q8IXL7 192 aa12.78□□□□□ -0.36
ECM1-202ENST00000369047 MICU2Q8IYU8 434 aa12.78□□□□□ -0.36
ECM1-202ENST00000369047 ZFP28Q8NHY6 868 aa12.78□□□□□ -0.36
ECM1-202ENST00000369047 ADAMTS16Q8TE57 1224 aa12.78□□□□□ -0.36
ECM1-202ENST00000369047 NUDT8Q8WV74 236 aa12.78□□□□□ -0.36
ECM1-202ENST00000369047 FIG4Q92562 907 aa12.78□□□□□ -0.36
ECM1-202ENST00000369047 GLYATL1Q969I3 302 aa12.78□□□□□ -0.36
ECM1-202ENST00000369047 RDH12Q96NR8 316 aa12.78□□□□□ -0.36
ECM1-202ENST00000369047 MAGIXQ9H6Y5 334 aa12.78□□□□□ -0.36
ECM1-202ENST00000369047 DNAJB9Q9UBS3 223 aa12.78□□□□□ -0.36
ECM1-202ENST00000369047 MAPRE3Q9UPY8 281 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms