RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 SNX7Q9UNH6 387 aa13.32□□□□□ -0.28
DDX54-202ENST00000314045 G3V2L1 256 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 CLDN4O14493 209 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 SLC16A5O15375 505 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 ERI3O43414 337 aaKnown RBP13.31□□□□□ -0.28
DDX54-202ENST00000314045 SCELO95171 688 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 KLK1P06870 262 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 DHRS4L1P0CG22 281 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 SMIM11AP58511 58 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 KCNC3Q14003 757 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 MINDY4Q4G0A6 757 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 DENND5AQ6IQ26 1287 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 CHRDL2Q6WN34 429 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 HSD11B1LQ7Z5J1 315 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 ADCK1Q86TW2 530 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 NPAS3Q8IXF0 933 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 OLIG1Q8TAK6 271 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 SLC9A6Q92581 669 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 CMTM7Q96FZ5 175 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 FAM83CQ9BQN1 747 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 FAM20BO75063 409 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 CPN2P22792 545 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 AMZ1Q400G9 498 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 LIPIQ6XZB0 460 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 LIMS2Q7Z4I7 341 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 C8orf59Q8N0T1 100 aaPredicted RBP13.31□□□□□ -0.28
DDX54-202ENST00000314045 ADCY4Q8NFM4 1077 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 OR52B6Q8NGF0 335 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 ZBED6CLQ96FA7 236 aaPredicted RBP13.31□□□□□ -0.28
DDX54-202ENST00000314045 GPR174Q9BXC1 333 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 XKR8Q9H6D3 395 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 FANCEQ9HB96 536 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 SLC2A4RGQ9NR83 387 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 A0A1W2PRB8 838 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 FAM149AA5PLN7 773 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 AP3D1O14617 1153 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 CFIP05156 583 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 GPIP06744 558 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 OCM2P0CE71 109 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 OCMP0CE72 109 aaPredicted RBP13.31□□□□□ -0.28
DDX54-202ENST00000314045 TIMP2P16035 220 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 ITGB7P26010 798 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 MAGEA3P43357 314 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 SPIN4Q56A73 249 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 OR4F3Q6IEY1 312 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 PARS2Q7L3T8 475 aaKnown RBP13.31□□□□□ -0.28
DDX54-202ENST00000314045 ACVR1CQ8NER5 493 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 CD200R1Q8TD46 325 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 RGMAQ96B86 450 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 NSMCE3Q96MG7 304 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 TRIB3Q96RU7 358 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 CGREF1Q99674 301 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 LRRC3Q9BY71 257 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 FZD3Q9NPG1 666 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 IGSF5Q9NSI5 407 aa13.31□□□□□ -0.28
DDX54-202ENST00000314045 MGRN1O60291 552 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 CDH1P12830 882 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 XRCC1P18887 633 aaPredicted RBP13.3□□□□□ -0.28
DDX54-202ENST00000314045 SOX9P48436 509 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 NUP107P57740 925 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 ACTR3P61158 418 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 RPS13P62277 151 aaKnown RBP13.3□□□□□ -0.28
DDX54-202ENST00000314045 SPIBQ01892 262 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 DEF8Q6ZN54 512 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 WFDC5Q8TCV5 224 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 PTERQ96BW5 349 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 CA14Q9ULX7 337 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 OR1A2Q9Y585 309 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 PCDHB11Q9Y5F2 797 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 SCN4AP35499 1836 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 A0A1W2PP18 115 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 FAM47E-STBD1D6RA91 191 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 E7ENX8 843 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 H3BNC9 293 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 H7BY64 318 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 PFDN1O60925 122 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 STATHP02808 62 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 ARCN1P48444 511 aaKnown RBP13.3□□□□□ -0.28
DDX54-202ENST00000314045 MEF2AQ02078 507 aaPredicted RBP13.3□□□□□ -0.28
DDX54-202ENST00000314045 SPANXN4Q5MJ08 99 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 CYP4Z2PQ8N1L4 340 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 OR2A12Q8NGT7 310 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 PIH1D2Q8WWB5 315 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 FAM3CQ92520 227 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 RBM18Q96H35 190 aaKnown RBP13.3□□□□□ -0.28
DDX54-202ENST00000314045 PRAP1Q96NZ9 151 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 KLHL25Q9H0H3 589 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 TPRKBQ9Y3C4 175 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 RPS3P23396 243 aaKnown RBP eCLIP13.3□□□□□ -0.28
DDX54-202ENST00000314045 PTPRRQ15256 657 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 AAK1Q2M2I8 961 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 USP39Q53GS9 565 aaKnown RBP13.3□□□□□ -0.28
DDX54-202ENST00000314045 MACC1Q6ZN28 852 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 CNTN4Q8IWV2 1026 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 WBP2Q969T9 261 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 IL17FQ96PD4 163 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 ZNF576Q9H609 170 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 TMED5Q9Y3A6 229 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 AP4B1Q9Y6B7 739 aa13.3□□□□□ -0.28
DDX54-202ENST00000314045 PDPK1O15530 556 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms