RNA–Protein interactions for RNA: ENST00000433165.6

CNKSR3-202, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best)

Gene CNKSR3, Length 2,347 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-202ENST00000433165 FUBP3Q96I24 572 aaKnown RBP eCLIP7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 ZFYVE19Q96K21 471 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 HSFY1Q96LI6 401 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 TMEM74Q96NL1 305 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 SIGLEC11Q96RL6 698 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 CCDC32Q9BV29 185 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 CDADC1Q9BWV3 514 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 UGT2B28Q9BY64 529 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 ZBTB20Q9HC78 741 aaPredicted RBP7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 CCNB1IP1Q9NPC3 277 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 C11orf16Q9NQ32 467 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 TAS2R9Q9NYW1 312 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 CCDC59Q9P031 241 aaKnown RBP7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 LEF1Q9UJU2 399 aaPredicted RBP7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 DNMT3LQ9UJW3 386 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 PNMA8BQ9ULN7 279 aaPredicted RBP7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 PCDHB5Q9Y5E4 795 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 GPR45Q9Y5Y3 372 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 HSPE1-MOB4S4R3N1 261 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 ANKRD12Q6UB98 2062 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 MYLKQ15746 1914 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 MIA3Q5JRA6 1907 aa7.53□□□□□ -1.2
CNKSR3-202ENST00000433165 TEX51A0A1B0GUA7 166 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 FAM86C2PA6NEL3 165 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 KCNK1O00180 336 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 BCKDKO14874 412 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 DSCR3O14972 297 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 ADAM12O43184 909 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 TMCC2O75069 709 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 MT-ND2P03891 347 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 ANXA6P08133 673 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 LTA4HP09960 611 aaKnown RBP7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 ITGA2P17301 1181 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 LBPP18428 481 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 S100A5P33763 92 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 NOS2P35228 1153 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 HTR2BP41595 481 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 MAGEA11P43364 429 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 PLK1P53350 603 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 TWF1Q12792 350 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 CDH17Q12864 832 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 CTBP1Q13363 440 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 RAPSNQ13702 412 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 DGCR6Q14129 220 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 SLC14A2Q15849 920 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 GOLGA7BQ2TAP0 167 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 TBRG1Q3YBR2 411 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 ZNF517Q6ZMY9 492 aaPredicted RBP7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 LIX1LQ8IVB5 337 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 SCUBE3Q8IX30 993 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 SYTL1Q8IYJ3 562 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 AMER2Q8N7J2 671 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 C2CD4AQ8NCU7 369 aaPredicted RBP7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 SETD9Q8NE22 299 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 RNF139Q8WU17 664 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 TWIST2Q8WVJ9 160 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 PIK3R3Q92569 461 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 SLC38A4Q969I6 547 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 ELSPBP1Q96BH3 223 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 PHF21BQ96EK2 531 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 SLC39A13Q96H72 371 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 MYADMQ96S97 322 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 SDHCQ99643 169 aaPredicted RBP7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 IER2Q9BTL4 223 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 CENPOQ9BU64 300 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 C6orf62Q9GZU0 229 aaPredicted RBP7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 NUAK2Q9H093 628 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 TRIM39Q9HCM9 518 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 ITM2CQ9NQX7 267 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 COMMD8Q9NX08 183 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 OBP2AQ9NY56 170 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 RAPGEFL1Q9UHV5 662 aa7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 TMEFF2Q9UIK5 374 aaPredicted RBP7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 MRPS17Q9Y2R5 130 aaKnown RBP7.52□□□□□ -1.2
CNKSR3-202ENST00000433165 PNMA8CA0A1B0GUJ8 204 aa7.52□□□□□ -1.21
CNKSR3-202ENST00000433165 MTMR11A4FU01 709 aa7.52□□□□□ -1.21
CNKSR3-202ENST00000433165 OR5K3A6NET4 321 aa7.52□□□□□ -1.21
CNKSR3-202ENST00000433165 LOC110117498-PIK3R3F6TDL0 507 aa7.52□□□□□ -1.21
CNKSR3-202ENST00000433165 CTDSP2O14595 271 aa7.52□□□□□ -1.21
CNKSR3-202ENST00000433165 AP3D1O14617 1153 aa7.52□□□□□ -1.21
CNKSR3-202ENST00000433165 PIP5K1BO14986 540 aa7.52□□□□□ -1.21
CNKSR3-202ENST00000433165 DCLK1O15075 740 aa7.52□□□□□ -1.21
CNKSR3-202ENST00000433165 NCAM2O15394 837 aa7.52□□□□□ -1.21
CNKSR3-202ENST00000433165 ZBTB24O43167 697 aaPredicted RBP7.52□□□□□ -1.21
CNKSR3-202ENST00000433165 GOT2P00505 430 aaKnown RBP7.52□□□□□ -1.21
CNKSR3-202ENST00000433165 PRR35P0CG20 571 aa7.52□□□□□ -1.21
CNKSR3-202ENST00000433165 PCNAP12004 261 aa7.52□□□□□ -1.21
CNKSR3-202ENST00000433165 TPH1P17752 444 aa7.52□□□□□ -1.21
CNKSR3-202ENST00000433165 PFKLP17858 780 aa7.52□□□□□ -1.21
CNKSR3-202ENST00000433165 GGT1P19440 569 aa7.52□□□□□ -1.21
CNKSR3-202ENST00000433165 CES1P23141 567 aa7.52□□□□□ -1.21
CNKSR3-202ENST00000433165 PLA2G5P39877 138 aa7.52□□□□□ -1.21
CNKSR3-202ENST00000433165 SLC1A2P43004 574 aa7.52□□□□□ -1.21
CNKSR3-202ENST00000433165 RPS5P46782 204 aaKnown RBP7.52□□□□□ -1.21
CNKSR3-202ENST00000433165 SNX16P57768 344 aa7.52□□□□□ -1.21
CNKSR3-202ENST00000433165 KCNK10P57789 538 aa7.52□□□□□ -1.21
CNKSR3-202ENST00000433165 SH3BP2P78314 561 aa7.52□□□□□ -1.21
CNKSR3-202ENST00000433165 BNC1Q01954 994 aa7.52□□□□□ -1.21
CNKSR3-202ENST00000433165 TAGLNQ01995 201 aaKnown RBP7.52□□□□□ -1.21
CNKSR3-202ENST00000433165 RAD51Q06609 339 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms