RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 IL23RQ5VWK5 629 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 NYAP1Q6ZVC0 841 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 LYSMD3Q7Z3D4 306 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 LRP10Q7Z4F1 713 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 HIPK1Q86Z02 1210 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 OR6Y1Q8NGX8 325 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 SPATA22Q8NHS9 363 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 AP3S1Q92572 193 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 PCDHB18PQ96TA0 734 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 CLSTN3Q9BQT9 956 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 KIFC1Q9BW19 673 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 CRISPLD1Q9H336 500 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 KCNF1Q9H3M0 494 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 ANKZF1Q9H8Y5 726 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 KCNK13Q9HB14 408 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 APOBEC3GQ9HC16 384 aaKnown RBP4.16□□□□□ -1.74
VCAN-209ENST00000513016 ASB6Q9NWX5 421 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 WASF3Q9UPY6 502 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 PCDHGB2Q9Y5G2 931 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 SNX10Q9Y5X0 201 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 NID2Q14112 1375 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 FADS2P1A8MWK0 482 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 NDUFS4O43181 175 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 NPHS1O60500 1241 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 B4GALT2O60909 372 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 SCELO95171 688 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 CHRNGP07510 517 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 MPC1LP0DKB6 136 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 COX4I1P13073 169 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 AHCYP23526 432 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 GDI2P50395 445 aaKnown RBP4.16□□□□□ -1.74
VCAN-209ENST00000513016 RAB2AP61019 212 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 PLEKHG4Q58EX7 1191 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 ARL9Q6T311 187 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 FUKQ8N0W3 1084 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 ARL14Q8N4G2 192 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 DNAJB14Q8TBM8 379 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 SNX33Q8WV41 574 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 CDKN2AIPNLQ96HQ2 116 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 CMKLR1Q99788 373 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 SLC35C2Q9NQQ7 365 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 CHRAC1Q9NRG0 131 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 TMEM184CQ9NVA4 438 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 TMPRSS11EQ9UL52 423 aa4.16□□□□□ -1.74
VCAN-209ENST00000513016 ZFR2Q9UPR6 939 aaKnown RBP4.16□□□□□ -1.74
VCAN-209ENST00000513016 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.16□□□□□ -1.74
VCAN-209ENST00000513016 ANKRD66B4E2M5 251 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 NPIPA5E9PKD4 350 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 PSMD11O00231 422 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 PGRMC2O15173 223 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 ALDOAP04075 364 aaKnown RBP4.15□□□□□ -1.74
VCAN-209ENST00000513016 BMP4P12644 408 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 PRPS1L1P21108 318 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 NIPAL4Q0D2K0 466 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 DCTN2Q13561 401 aaKnown RBP4.15□□□□□ -1.74
VCAN-209ENST00000513016 TAF5Q15542 800 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 KIAA0319Q5VV43 1072 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 RSBN1Q5VWQ0 802 aaPredicted RBP4.15□□□□□ -1.74
VCAN-209ENST00000513016 KCTD8Q6ZWB6 473 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 OSTM1Q86WC4 334 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 ZNF280BQ86YH2 543 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 CCDC103Q8IW40 242 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 PRELID2Q8N945 189 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 MRPL43Q8N983 215 aaKnown RBP4.15□□□□□ -1.74
VCAN-209ENST00000513016 TWIST2Q8WVJ9 160 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 TSEN15Q8WW01 171 aaKnown RBP4.15□□□□□ -1.74
VCAN-209ENST00000513016 TFAP2BQ92481 460 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 MIEF2Q96C03 454 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 MMABQ96EY8 250 aaPredicted RBP4.15□□□□□ -1.74
VCAN-209ENST00000513016 SLC47A1Q96FL8 570 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 ANKRD27Q96NW4 1050 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 C1orf50Q9BV19 199 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 TPSD1Q9BZJ3 242 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 GPR62Q9BZJ7 368 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 ACSS2Q9NR19 701 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 P2RX2Q9UBL9 471 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 UPB1Q9UBR1 384 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 PAIP2BQ9ULR5 123 aaKnown RBP4.15□□□□□ -1.74
VCAN-209ENST00000513016 NPIPA1Q9UND3 350 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 SSR3Q9UNL2 185 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 NFAT5O94916 1531 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 A0A1W2PQ72 361 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 FAM92AA1XBS5 289 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 GJE1A6NN92 205 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 GMFGO60234 142 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 BRINP1O60477 761 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 SCGB2A1O75556 95 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 CYP11A1P05108 521 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 NUDT17P0C025 328 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 PABPC4LP0CB38 370 aaKnown RBP4.15□□□□□ -1.74
VCAN-209ENST00000513016 IRF2P14316 349 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 EN2P19622 333 aaPredicted RBP4.15□□□□□ -1.74
VCAN-209ENST00000513016 TNFRSF8P28908 595 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 FOLR3P41439 243 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 ZNF84P51523 738 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 RRADP55042 308 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 MEF2AQ02078 507 aaPredicted RBP4.15□□□□□ -1.74
VCAN-209ENST00000513016 TMEM115Q12893 351 aaPredicted RBP4.15□□□□□ -1.74
VCAN-209ENST00000513016 SEMA5AQ13591 1074 aa4.15□□□□□ -1.74
VCAN-209ENST00000513016 DRICH1Q6PGQ1 229 aaPredicted RBP4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms