RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 GOLGA8KD6RF30 607 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 GOLGA8TH3BQL2 631 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 RASGRF2O14827 1237 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 PFDN6O15212 129 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 PRICKLE3O43900 615 aaPredicted RBP10.39□□□□□ -0.75
SEC13-214ENST00000476597 KLF7O75840 302 aaPredicted RBP10.39□□□□□ -0.75
SEC13-214ENST00000476597 TMEM63AO94886 807 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 C1orf105O95561 183 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 S1PR4O95977 384 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 MLNP12872 115 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 MAGP20916 626 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 FMO4P31512 558 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 PTGIRP43119 386 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 GCGRP47871 477 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 TERF1P54274 439 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 ADARP55265 1226 aaKnown RBP10.39□□□□□ -0.75
SEC13-214ENST00000476597 DCDP81605 110 aaKnown RBP10.39□□□□□ -0.75
SEC13-214ENST00000476597 FOXK1P85037 733 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 IGFBP7Q16270 282 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 TYSND1Q2T9J0 566 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 MLIPQ5VWP3 458 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 ANKRD22Q5VYY1 191 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 PAPD7Q5XG87 772 aaKnown RBP10.39□□□□□ -0.75
SEC13-214ENST00000476597 CPZQ66K79 652 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 KIAA0930Q6ICG6 404 aaPredicted RBP10.39□□□□□ -0.75
SEC13-214ENST00000476597 TTC23LQ6PF05 361 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 FIGLAQ6QHK4 219 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 OTOAQ7RTW8 1153 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 MCATQ8IVS2 390 aaKnown RBP10.39□□□□□ -0.75
SEC13-214ENST00000476597 C2orf73Q8N5S3 287 aaPredicted RBP10.39□□□□□ -0.75
SEC13-214ENST00000476597 ZBTB2Q8N680 514 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 MCUQ8NE86 351 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 GSDMBQ8TAX9 411 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 PROKR1Q8TCW9 393 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 LPGAT1Q92604 370 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 MAGOHBQ96A72 148 aaKnown RBP10.39□□□□□ -0.75
SEC13-214ENST00000476597 MS4A14Q96JA4 679 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 C17orf62Q9BQA9 187 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 ACSS2Q9NR19 701 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 ENAMQ9NRM1 1142 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 EURLQ9NYK6 297 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 CIDEBQ9UHD4 219 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 SLC39A10Q9ULF5 831 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 KLHL20Q9Y2M5 609 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 PCDHGA9Q9Y5G4 932 aaKnown RBP10.39□□□□□ -0.75
SEC13-214ENST00000476597 MRFAP1Q9Y605 127 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 NFS1Q9Y697 457 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 SEC16AO15027 2179 aa10.39□□□□□ -0.75
SEC13-214ENST00000476597 FAM237BA0A1B0GVD1 139 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 SDR42E2A6NKP2 422 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 TARM1B6A8C7 271 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 C9J4A7 227 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 H3BMM5 538 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 ZSCAN9O15535 394 aaPredicted RBP10.38□□□□□ -0.75
SEC13-214ENST00000476597 CEACAM4O75871 244 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 FKBP9O95302 570 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 MATN4O95460 622 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 ESR1P03372 595 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 CD63P08962 238 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 SPTBP11277 2137 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 OGNP20774 298 aaKnown RBP10.38□□□□□ -0.75
SEC13-214ENST00000476597 COILP38432 576 aaPredicted RBP10.38□□□□□ -0.75
SEC13-214ENST00000476597 CCNFP41002 786 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 VPS41P49754 854 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 EIF3BP55884 814 aaKnown RBP10.38□□□□□ -0.75
SEC13-214ENST00000476597 CHAF1BQ13112 559 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 GBX1Q14549 363 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 SSPNQ14714 243 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 SF1Q15637 639 aaKnown RBP10.38□□□□□ -0.75
SEC13-214ENST00000476597 CYP1B1Q16678 543 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 CCSMST1Q4G0I0 132 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 COLEC12Q5KU26 742 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 RNF187Q5TA31 235 aaPredicted RBP10.38□□□□□ -0.75
SEC13-214ENST00000476597 C1orf189Q5VU69 101 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 FCRL6Q6DN72 434 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 NEPROQ6NW34 567 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 MRPL14Q6P1L8 145 aaKnown RBP10.38□□□□□ -0.75
SEC13-214ENST00000476597 CENPUQ71F23 418 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 MED25Q71SY5 747 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 REXO1L1PQ8IX06 675 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 OTUD6BQ8N6M0 293 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 ZNF655Q8N720 491 aaPredicted RBP10.38□□□□□ -0.75
SEC13-214ENST00000476597 TMEM102Q8N9M5 508 aaPredicted RBP10.38□□□□□ -0.75
SEC13-214ENST00000476597 HMGCLL1Q8TB92 370 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 ZUFSPQ96AP4 578 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 FOPNLQ96NB1 174 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 SLC25A23Q9BV35 468 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 RAB11FIP5Q9BXF6 653 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.38□□□□□ -0.75
SEC13-214ENST00000476597 DHCR7Q9UBM7 475 aaKnown RBP10.38□□□□□ -0.75
SEC13-214ENST00000476597 SRPK3Q9UPE1 567 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 PADI2Q9Y2J8 665 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 NEU2Q9Y3R4 380 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 PCDHGB7Q9Y5F8 929 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 PTPN13Q12923 2485 aa10.38□□□□□ -0.75
SEC13-214ENST00000476597 RP1L1Q8IWN7 2480 aaPredicted RBP10.38□□□□□ -0.75
SEC13-214ENST00000476597 USP9XQ93008 2570 aaPredicted RBP10.37□□□□□ -0.75
SEC13-214ENST00000476597 CNOT3O75175 753 aaKnown RBP10.37□□□□□ -0.75
SEC13-214ENST00000476597 NIPSNAP2O75323 286 aa10.37□□□□□ -0.75
SEC13-214ENST00000476597 ONECUT2O95948 504 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms