RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR78, Length 87 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR78snR78 ASF1P32447 279 aa8.08□□□□□ -1.12
snR78snR78 RSB1Q08417 382 aa8.07□□□□□ -1.12
snR78snR78 SYP1P25623 870 aaKnown RBP8.06□□□□□ -1.12
snR78snR78 HXT13P39924 564 aa8.06□□□□□ -1.12
snR78snR78 HXT17P53631 564 aa8.06□□□□□ -1.12
snR78snR78 HXT15P54854 567 aa8.06□□□□□ -1.12
snR78snR78 PUF4P25339 888 aaKnown RBP RIP-Chip data8.05□□□□□ -1.12not detected
snR78snR78 RPN3P40016 523 aaKnown RBP8.05□□□□□ -1.12
snR78snR78 GNP1P48813 663 aa8.05□□□□□ -1.12
snR78snR78 RAD27P26793 382 aa8.04□□□□□ -1.12
snR78snR78 BAP2P38084 609 aa8.04□□□□□ -1.12
snR78snR78 AIM3P38266 947 aaKnown RBP8.04□□□□□ -1.12
snR78snR78 SNO2P53823 222 aa8.04□□□□□ -1.12
snR78snR78 OYE2Q03558 400 aaKnown RBP8.04□□□□□ -1.12
snR78snR78 RGD1P38339 666 aa8.03□□□□□ -1.12
snR78snR78 PIK1P39104 1066 aa8.03□□□□□ -1.12
snR78snR78 PRP6P19735 899 aaPredicted RBP8.02□□□□□ -1.13
snR78snR78 MLS1P30952 554 aa8.02□□□□□ -1.13
snR78snR78 CNN1P43618 361 aa8.02□□□□□ -1.13
snR78snR78 ENV11P53246 860 aa8.02□□□□□ -1.13
snR78snR78 RTT10Q08924 1013 aa8.02□□□□□ -1.13
snR78snR78 SNF5P18480 905 aa8.01□□□□□ -1.13
snR78snR78 RMD1Q03441 430 aa8.01□□□□□ -1.13
snR78snR78 YOR352WQ08816 343 aa8.01□□□□□ -1.13
snR78snR78 DBP5P20449 482 aaKnown RBP8□□□□□ -1.13
snR78snR78 THI80P35202 319 aa8□□□□□ -1.13
snR78snR78 SEC26P41810 973 aaKnown RBP8□□□□□ -1.13
snR78snR78 YER152CP10356 443 aa7.99□□□□□ -1.13
snR78snR78 RIM8P53179 542 aa7.99□□□□□ -1.13
snR78snR78 RER2P35196 286 aa7.98□□□□□ -1.13
snR78snR78 ESC8Q08119 714 aa7.98□□□□□ -1.13
snR78snR78 TMA46Q12000 345 aaKnown RBP7.98□□□□□ -1.13
snR78snR78 YPL277CQ08989 487 aa7.97□□□□□ -1.13
snR78snR78 MCM7P38132 845 aa7.96□□□□□ -1.14
snR78snR78 HNT2P49775 206 aa7.96□□□□□ -1.14
snR78snR78 SOD2P00447 233 aa7.95□□□□□ -1.14
snR78snR78 RPS13P05756 151 aaKnown RBP7.95□□□□□ -1.14
snR78snR78 YKL222CP35995 705 aa7.95□□□□□ -1.14
snR78snR78 YFL054CP43549 646 aa7.95□□□□□ -1.14
snR78snR78 TIF35Q04067 274 aaKnown RBP7.95□□□□□ -1.14
snR78snR78 PET112P33893 541 aa7.94□□□□□ -1.14
snR78snR78 TOD6P34219 525 aa7.94□□□□□ -1.14
snR78snR78 MPH1P40562 993 aa7.94□□□□□ -1.14
snR78snR78 CYC1P00044 109 aaPredicted RBP7.93□□□□□ -1.14
snR78snR78 RFC5P38251 354 aa7.93□□□□□ -1.14
snR78snR78 RSM24Q03976 319 aa7.93□□□□□ -1.14
snR78snR78 SGD1Q06132 899 aa7.93□□□□□ -1.14
snR78snR78 YCR015CP25616 317 aa7.92□□□□□ -1.14
snR78snR78 ABZ1P37254 787 aaPredicted RBP7.92□□□□□ -1.14
snR78snR78 LAM1P38851 1228 aa7.91□□□□□ -1.14
snR78snR78 TAF1P46677 1066 aa7.91□□□□□ -1.14
snR78snR78 FLR1P38124 548 aa7.9□□□□□ -1.14
snR78snR78 GNT1Q12096 491 aa7.9□□□□□ -1.14
snR78snR78 SVS1Q12254 260 aa7.9□□□□□ -1.14
snR78snR78 CDC34P14682 295 aa7.89□□□□□ -1.15
snR78snR78 BAS1P22035 811 aa7.89□□□□□ -1.15
snR78snR78 GIP4P39732 760 aa7.89□□□□□ -1.15
snR78snR78 MXR1P40029 184 aa7.89□□□□□ -1.15
snR78snR78 MAP1Q01662 387 aaKnown RBP RIP-Chip data7.89□□□□□ -1.15not detected
snR78snR78 ROT1Q03691 256 aa7.89□□□□□ -1.15
snR78snR78 LYP1P32487 611 aa7.88□□□□□ -1.15
snR78snR78 DUT1P33317 147 aa7.88□□□□□ -1.15
snR78snR78 MEF2P39677 819 aa7.88□□□□□ -1.15
snR78snR78 SPT20P50875 604 aa7.88□□□□□ -1.15
snR78snR78 TRP2P00899 507 aaKnown RBP7.87□□□□□ -1.15
snR78snR78 RPL11AP0C0W9 174 aaKnown RBP7.87□□□□□ -1.15
snR78snR78 KIN2P13186 1147 aaKnown RBP7.87□□□□□ -1.15
snR78snR78 CMP2P14747 604 aa7.87□□□□□ -1.15
snR78snR78 MNR2P35724 969 aa7.87□□□□□ -1.15
snR78snR78 NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.87□□□□□ -1.15not detected
snR78snR78 RPL11BQ3E757 174 aaPredicted RBP7.87□□□□□ -1.15
snR78snR78 APL1P27351 700 aa7.86□□□□□ -1.15
snR78snR78 TYW3P53177 273 aa7.86□□□□□ -1.15
snR78snR78 GCN5Q03330 439 aa7.86□□□□□ -1.15
snR78snR78 SPP382Q06411 708 aaPredicted RBP7.86□□□□□ -1.15
snR78snR78 UGA2P38067 497 aa7.85□□□□□ -1.15
snR78snR78 EEB1Q02891 456 aa7.85□□□□□ -1.15
snR78snR78 YDR132CQ03900 495 aa7.85□□□□□ -1.15
snR78snR78 YLR358CO13565 187 aa7.84□□□□□ -1.15
snR78snR78 GAL10P04397 699 aa7.84□□□□□ -1.15
snR78snR78 INO1P11986 533 aa7.84□□□□□ -1.15
snR78snR78 MOT2P34909 587 aaKnown RBP7.84□□□□□ -1.15
snR78snR78 GEM1P39722 662 aa7.84□□□□□ -1.15
snR78snR78 PLB2Q03674 706 aa7.84□□□□□ -1.15
snR78snR78 ACM1Q08981 209 aa7.84□□□□□ -1.15
snR78snR78 MET10P39692 1035 aa7.83□□□□□ -1.16
snR78snR78 ATG13Q06628 738 aa7.83□□□□□ -1.16
snR78snR78 DBP2P24783 546 aaKnown RBP7.82□□□□□ -1.16
snR78snR78 VTS1Q08831 523 aaKnown RBP RIP-Chip data7.82□□□□□ -1.16not detected
snR78snR78 RKM4Q12504 494 aa7.82□□□□□ -1.16
snR78snR78 PRE10P21242 288 aaKnown RBP RIP-Chip data7.81□□□□□ -1.16not detected
snR78snR78 SRM1P21827 482 aa7.81□□□□□ -1.16
snR78snR78 SPO20Q04359 397 aa7.81□□□□□ -1.16
snR78snR78 BI4P03879 638 aa7.8□□□□□ -1.16
snR78snR78 THS1P04801 734 aaKnown RBP7.8□□□□□ -1.16
snR78snR78 PNT1P38969 423 aa7.8□□□□□ -1.16
snR78snR78 YGL176CP46945 554 aa7.8□□□□□ -1.16
snR78snR78 CLU1Q03690 1277 aaKnown RBP7.8□□□□□ -1.16
snR78snR78 RIB2Q12362 591 aaKnown RBP7.8□□□□□ -1.16
snR78snR78 ACE2P21192 770 aa7.79□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 68.1 ms