RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C TIM54P47045 478 aa4.3□□□□□ -1.72
RPC40YPR110C YNR063WP53749 607 aa4.3□□□□□ -1.72
RPC40YPR110C RSA3Q05942 220 aaKnown RBP4.3□□□□□ -1.72
RPC40YPR110C GNT1Q12096 491 aa4.3□□□□□ -1.72
RPC40YPR110C AI3P03877 415 aa4.29□□□□□ -1.72
RPC40YPR110C SBP1P10080 294 aaKnown RBP4.29□□□□□ -1.72
RPC40YPR110C RET1P22276 1149 aaKnown RBP4.29□□□□□ -1.72
RPC40YPR110C PUF4P25339 888 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
RPC40YPR110C MLS1P30952 554 aa4.29□□□□□ -1.72
RPC40YPR110C SMY2P32909 740 aaKnown RBP4.29□□□□□ -1.72
RPC40YPR110C YKL107WP34251 309 aa4.29□□□□□ -1.72
RPC40YPR110C CHZ1P40019 153 aaPredicted RBP4.29□□□□□ -1.72
RPC40YPR110C MSH4P40965 878 aaPredicted RBP4.29□□□□□ -1.72
RPC40YPR110C YGL176CP46945 554 aa4.29□□□□□ -1.72
RPC40YPR110C PFD1P46988 109 aa4.29□□□□□ -1.72
RPC40YPR110C UTP8P53276 713 aaKnown RBP4.29□□□□□ -1.72
RPC40YPR110C FLC1Q08967 793 aa4.29□□□□□ -1.72
RPC40YPR110C CIT1P00890 479 aa4.28□□□□□ -1.72
RPC40YPR110C RSC6P25632 483 aa4.28□□□□□ -1.72
RPC40YPR110C GPT2P36148 743 aa4.28□□□□□ -1.72
RPC40YPR110C MCM7P38132 845 aa4.28□□□□□ -1.72
RPC40YPR110C GGA2P38817 585 aaKnown RBP4.28□□□□□ -1.72
RPC40YPR110C RSP5P39940 809 aaKnown RBP4.28□□□□□ -1.72
RPC40YPR110C RPN3P40016 523 aaKnown RBP4.28□□□□□ -1.72
RPC40YPR110C SIP5P40210 489 aaKnown RBP4.28□□□□□ -1.72
RPC40YPR110C ALT1P52893 592 aa4.28□□□□□ -1.72
RPC40YPR110C YLR257WQ06146 321 aaKnown RBP4.28□□□□□ -1.72
RPC40YPR110C OSH2Q12451 1283 aa4.28□□□□□ -1.72
RPC40YPR110C HSP60P19882 572 aaKnown RBP4.27□□□□□ -1.73
RPC40YPR110C NFS1P25374 497 aa4.27□□□□□ -1.73
RPC40YPR110C KIP1P28742 1111 aa4.27□□□□□ -1.73
RPC40YPR110C BRN1P38170 754 aa4.27□□□□□ -1.73
RPC40YPR110C PNT1P38969 423 aa4.27□□□□□ -1.73
RPC40YPR110C MBP1P39678 833 aa4.27□□□□□ -1.73
RPC40YPR110C PRY1P47032 299 aa4.27□□□□□ -1.73
RPC40YPR110C ARI1P53111 347 aaKnown RBP4.27□□□□□ -1.73
RPC40YPR110C ERP6P53198 216 aa4.27□□□□□ -1.73
RPC40YPR110C YGR125WP53273 1036 aa4.27□□□□□ -1.73
RPC40YPR110C GAS5Q08193 484 aa4.27□□□□□ -1.73
RPC40YPR110C HRK1Q08732 759 aaKnown RBP4.27□□□□□ -1.73
RPC40YPR110C YER152CP10356 443 aa4.26□□□□□ -1.73
RPC40YPR110C SCT1P32784 759 aa4.26□□□□□ -1.73
RPC40YPR110C SPC42P36094 363 aa4.26□□□□□ -1.73
RPC40YPR110C ALG12P53730 551 aa4.26□□□□□ -1.73
RPC40YPR110C GIC2Q06648 383 aa4.26□□□□□ -1.73
RPC40YPR110C GAL11P19659 1081 aa4.25□□□□□ -1.73
RPC40YPR110C PRP9P19736 530 aaKnown RBP4.25□□□□□ -1.73
RPC40YPR110C PPG1P32838 368 aa4.25□□□□□ -1.73
RPC40YPR110C NUP82P40368 713 aa4.25□□□□□ -1.73
RPC40YPR110C GUS1P46655 708 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
RPC40YPR110C UBP3Q01477 912 aaKnown RBP RIP-Chip data4.25□□□□□ -1.73not detected
RPC40YPR110C TAF8Q03750 510 aa4.25□□□□□ -1.73
RPC40YPR110C EAF1Q06337 982 aa4.25□□□□□ -1.73
RPC40YPR110C SPO21Q12411 609 aa4.25□□□□□ -1.73
RPC40YPR110C CAN1P04817 590 aa4.24□□□□□ -1.73
RPC40YPR110C RPL11AP0C0W9 174 aaKnown RBP4.24□□□□□ -1.73
RPC40YPR110C RPS4AP0CX35 261 aaKnown RBP4.24□□□□□ -1.73
RPC40YPR110C RPS4BP0CX36 261 aaKnown RBP4.24□□□□□ -1.73
RPC40YPR110C BAP2P38084 609 aa4.24□□□□□ -1.73
RPC40YPR110C GEM1P39722 662 aa4.24□□□□□ -1.73
RPC40YPR110C SPP382Q06411 708 aaPredicted RBP4.24□□□□□ -1.73
RPC40YPR110C PUS7Q08647 676 aaKnown RBP4.24□□□□□ -1.73
RPC40YPR110C RPL11BQ3E757 174 aaPredicted RBP4.24□□□□□ -1.73
RPC40YPR110C PHO8P11491 566 aa4.23□□□□□ -1.73
RPC40YPR110C DBP2P24783 546 aaKnown RBP4.23□□□□□ -1.73
RPC40YPR110C ARE1P25628 610 aa4.23□□□□□ -1.73
RPC40YPR110C HBS1P32769 611 aaKnown RBP4.23□□□□□ -1.73
RPC40YPR110C YSC84P32793 468 aa4.23□□□□□ -1.73
RPC40YPR110C TIM23P32897 222 aa4.23□□□□□ -1.73
RPC40YPR110C HUL4P40985 892 aa4.23□□□□□ -1.73
RPC40YPR110C ALR2P43553 858 aa4.23□□□□□ -1.73
RPC40YPR110C YJL045WP47052 634 aa4.23□□□□□ -1.73
RPC40YPR110C TNA1P53322 534 aa4.23□□□□□ -1.73
RPC40YPR110C HOS3Q02959 697 aaKnown RBP4.23□□□□□ -1.73
RPC40YPR110C YLR125WQ12138 136 aa4.23□□□□□ -1.73
RPC40YPR110C SNF5P18480 905 aa4.22□□□□□ -1.73
RPC40YPR110C SLA2P33338 968 aa4.22□□□□□ -1.73
RPC40YPR110C PGM1P33401 570 aaKnown RBP4.22□□□□□ -1.73
RPC40YPR110C FPR3P38911 411 aaKnown RBP4.22□□□□□ -1.73
RPC40YPR110C GPB2P39717 880 aa4.22□□□□□ -1.73
RPC40YPR110C SIT1P39980 628 aa4.22□□□□□ -1.73
RPC40YPR110C NPL3Q01560 414 aaKnown RBP RIP-Chip data4.22□□□□□ -1.73not detected
RPC40YPR110C EAR1Q03212 550 aa4.22□□□□□ -1.73
RPC40YPR110C TPP1Q03796 238 aa4.22□□□□□ -1.73
RPC40YPR110C YOR059CQ08448 450 aaKnown RBP4.22□□□□□ -1.73
RPC40YPR110C ACM1Q08981 209 aa4.22□□□□□ -1.73
RPC40YPR110C HBN1Q96VH4 193 aa4.22□□□□□ -1.73
RPC40YPR110C MET6P05694 767 aaKnown RBP4.21□□□□□ -1.74
RPC40YPR110C SRO9P25567 434 aaKnown RBP4.21□□□□□ -1.74
RPC40YPR110C CDC11P32458 415 aa4.21□□□□□ -1.74
RPC40YPR110C BET3P36149 193 aa4.21□□□□□ -1.74
RPC40YPR110C PIK1P39104 1066 aa4.21□□□□□ -1.74
RPC40YPR110C MXR1P40029 184 aa4.21□□□□□ -1.74
RPC40YPR110C RTA1P53047 317 aa4.21□□□□□ -1.74
RPC40YPR110C UBX5Q06682 500 aa4.21□□□□□ -1.74
RPC40YPR110C YDL124WQ07551 312 aaKnown RBP4.21□□□□□ -1.74
RPC40YPR110C YVC1Q12324 675 aa4.21□□□□□ -1.74
RPC40YPR110C COQ4O13525 335 aa4.2□□□□□ -1.74
RPC40YPR110C THS1P04801 734 aaKnown RBP4.2□□□□□ -1.74
RPC40YPR110C ERR1P0CX10 437 aa4.2□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 67.3 ms