RNA–Protein interactions for RNA: YOR322C

LDB19, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene LDB19, Length 2,457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB19YOR322C RSM7P47150 247 aa6.42□□□□□ -1.38
LDB19YOR322C UBA2P52488 636 aa6.42□□□□□ -1.38
LDB19YOR322C MON1P53129 644 aa6.42□□□□□ -1.38
LDB19YOR322C HST1P53685 503 aa6.42□□□□□ -1.38
LDB19YOR322C NIS1P53939 407 aa6.42□□□□□ -1.38
LDB19YOR322C UFO1Q04511 668 aa6.42□□□□□ -1.38
LDB19YOR322C ARP9Q05123 467 aa6.42□□□□□ -1.38
LDB19YOR322C YDL144CQ07589 356 aa6.42□□□□□ -1.38
LDB19YOR322C IOC2Q12072 812 aa6.42□□□□□ -1.38
LDB19YOR322C CLB3P24870 427 aa6.42□□□□□ -1.38
LDB19YOR322C LHS1P36016 881 aa6.42□□□□□ -1.38
LDB19YOR322C GCD14P46959 383 aaPredicted RBP6.42□□□□□ -1.38
LDB19YOR322C ATP22P50273 684 aaPredicted RBP6.42□□□□□ -1.38
LDB19YOR322C COG6P53959 839 aa6.42□□□□□ -1.38
LDB19YOR322C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38 RIP-Chip
LDB19YOR322C BUG1Q12191 341 aa6.42□□□□□ -1.38
LDB19YOR322C PHM7Q12252 991 aa6.42□□□□□ -1.38
LDB19YOR322C RAD4P14736 754 aa6.41□□□□□ -1.38
LDB19YOR322C PMA2P19657 947 aa6.41□□□□□ -1.38
LDB19YOR322C YKL023WP36103 277 aaKnown RBP6.41□□□□□ -1.38
LDB19YOR322C GDT1P38301 280 aaPredicted RBP6.41□□□□□ -1.38
LDB19YOR322C YHR020WP38708 688 aaKnown RBP6.41□□□□□ -1.38
LDB19YOR322C YEN1P40028 759 aa6.41□□□□□ -1.38
LDB19YOR322C SAP155P43612 1002 aa6.41□□□□□ -1.38
LDB19YOR322C SSN8P47821 323 aa6.41□□□□□ -1.38
LDB19YOR322C TEA1P47988 759 aa6.41□□□□□ -1.38
LDB19YOR322C YNL144CP53907 740 aa6.41□□□□□ -1.38
LDB19YOR322C PIN2Q12057 282 aa6.41□□□□□ -1.38
LDB19YOR322C YOL087CQ99247 1116 aa6.41□□□□□ -1.38
LDB19YOR322C DRS2P39524 1355 aa6.41□□□□□ -1.38
LDB19YOR322C YMR084WA2P2R3 262 aa6.41□□□□□ -1.38
LDB19YOR322C VPH2P32341 215 aa6.41□□□□□ -1.38
LDB19YOR322C PEX32P38292 413 aa6.41□□□□□ -1.38
LDB19YOR322C YJR061WP40355 935 aa6.41□□□□□ -1.38
LDB19YOR322C DAK2P43550 591 aa6.41□□□□□ -1.38
LDB19YOR322C CNN1P43618 361 aa6.41□□□□□ -1.38
LDB19YOR322C FYV8P46949 817 aaKnown RBP6.41□□□□□ -1.38
LDB19YOR322C YKU80Q04437 629 aa6.41□□□□□ -1.38
LDB19YOR322C STB3Q12427 513 aa6.41□□□□□ -1.38
LDB19YOR322C TFC4P33339 1025 aa6.4□□□□□ -1.38
LDB19YOR322C TRZ1P36159 838 aaPredicted RBP6.4□□□□□ -1.38
LDB19YOR322C MMM1P41800 426 aa6.4□□□□□ -1.38
LDB19YOR322C ECL1P48235 211 aa6.4□□□□□ -1.38
LDB19YOR322C MIG2P53035 382 aa6.4□□□□□ -1.38
LDB19YOR322C RAT1Q02792 1006 aaKnown RBP6.4□□□□□ -1.38
LDB19YOR322C SEC14P24280 304 aaKnown RBP6.4□□□□□ -1.39
LDB19YOR322C RIB7P33312 244 aa6.4□□□□□ -1.39
LDB19YOR322C SEC66P33754 206 aa6.4□□□□□ -1.39
LDB19YOR322C TOK1P40310 691 aa6.4□□□□□ -1.39
LDB19YOR322C TRF5P48561 642 aaKnown RBP6.4□□□□□ -1.39
LDB19YOR322C TSR2Q06672 205 aaKnown RBP6.4□□□□□ -1.39
LDB19YOR322C YDL124WQ07551 312 aaKnown RBP6.4□□□□□ -1.39
LDB19YOR322C LOT6Q07923 191 aa6.4□□□□□ -1.39
LDB19YOR322C HAT1Q12341 374 aa6.4□□□□□ -1.39
LDB19YOR322C PGI1P12709 554 aaKnown RBP6.39□□□□□ -1.39
LDB19YOR322C SFL1P20134 766 aa6.39□□□□□ -1.39
LDB19YOR322C DPH2P32461 534 aa6.39□□□□□ -1.39
LDB19YOR322C BAP2P38084 609 aa6.39□□□□□ -1.39
LDB19YOR322C SAP4P53036 818 aa6.39□□□□□ -1.39
LDB19YOR322C SPO20Q04359 397 aa6.39□□□□□ -1.39
LDB19YOR322C ESC8Q08119 714 aa6.39□□□□□ -1.39
LDB19YOR322C RRP6Q12149 733 aaKnown RBP6.39□□□□□ -1.39
LDB19YOR322C REC8Q12188 680 aa6.39□□□□□ -1.39
LDB19YOR322C NOT3P06102 836 aaKnown RBP6.39□□□□□ -1.39
LDB19YOR322C HIS3P06633 220 aa6.39□□□□□ -1.39
LDB19YOR322C STE3P06783 470 aa6.39□□□□□ -1.39
LDB19YOR322C UBC6P33296 250 aaPredicted RBP6.39□□□□□ -1.39
LDB19YOR322C DUR3P33413 735 aa6.39□□□□□ -1.39
LDB19YOR322C KIC1P38692 1080 aa6.39□□□□□ -1.39
LDB19YOR322C MNN1P39106 762 aa6.39□□□□□ -1.39
LDB19YOR322C EDC3P39998 551 aaKnown RBP6.39□□□□□ -1.39
LDB19YOR322C NOP16P40007 231 aaKnown RBP6.39□□□□□ -1.39
LDB19YOR322C INA22P40576 216 aa6.39□□□□□ -1.39
LDB19YOR322C APS3P47064 194 aa6.39□□□□□ -1.39
LDB19YOR322C PEX14P53112 341 aa6.39□□□□□ -1.39
LDB19YOR322C YNL035CP53962 389 aaKnown RBP6.39□□□□□ -1.39
LDB19YOR322C CEG1Q01159 459 aaPredicted RBP6.39□□□□□ -1.39
LDB19YOR322C ULP1Q02724 621 aa6.39□□□□□ -1.39
LDB19YOR322C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
LDB19YOR322C BUL2Q03758 920 aaKnown RBP6.39□□□□□ -1.39
LDB19YOR322C PLP1Q04004 230 aa6.39□□□□□ -1.39
LDB19YOR322C VPS36Q06696 566 aa6.39□□□□□ -1.39
LDB19YOR322C MRN1Q08925 612 aaKnown RBP RIP-Chip data6.39□□□□□ -1.39not detected
LDB19YOR322C NEW1Q08972 1196 aaKnown RBP6.39□□□□□ -1.39
LDB19YOR322C RTC5Q12108 567 aaKnown RBP6.39□□□□□ -1.39
LDB19YOR322C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.38□□□□□ -1.39 RIP-Chip
LDB19YOR322C TIF1P10081 395 aaKnown RBP6.38□□□□□ -1.39
LDB19YOR322C CKA2P19454 339 aa6.38□□□□□ -1.39
LDB19YOR322C VPS3P23643 1011 aa6.38□□□□□ -1.39
LDB19YOR322C HCS1P34243 683 aa6.38□□□□□ -1.39
LDB19YOR322C YKL222CP35995 705 aa6.38□□□□□ -1.39
LDB19YOR322C RTS1P38903 757 aa6.38□□□□□ -1.39
LDB19YOR322C SEC28P40509 296 aaKnown RBP6.38□□□□□ -1.39
LDB19YOR322C NOT5Q12514 560 aaPredicted RBP6.38□□□□□ -1.39
LDB19YOR322C NUP145P49687 1317 aa6.38□□□□□ -1.39
LDB19YOR322C INH1P01097 85 aa6.38□□□□□ -1.39
LDB19YOR322C WHI3P34761 661 aaKnown RBP6.38□□□□□ -1.39
LDB19YOR322C RSM22P36056 628 aa6.38□□□□□ -1.39
LDB19YOR322C POP2P39008 433 aa6.38□□□□□ -1.39
LDB19YOR322C LOC1P43586 204 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms