RNA–Protein interactions for RNA: YOR290C

SNF2, Transcript of Catalytic subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF2, Length 5,112 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF2	YOR290C	MIP1	P15801	1254 aa		4.37	□□□□□ -1.71
SNF2	YOR290C	IMP2'	P32351	346 aa		4.37	□□□□□ -1.71
SNF2	YOR290C	STO1	P34160	861 aa	Known RBP	4.37	□□□□□ -1.71
SNF2	YOR290C	YKR078W	P36158	585 aa	Known RBP	4.37	□□□□□ -1.71
SNF2	YOR290C	OTU2	P38747	307 aa	Known RBP	4.37	□□□□□ -1.71
SNF2	YOR290C	DID2	P69771	204 aa		4.37	□□□□□ -1.71
SNF2	YOR290C	ADF1	Q2V2Q1	113 aa		4.37	□□□□□ -1.71
SNF2	YOR290C	YEL077C	Q3E7X8	1277 aa		4.37	□□□□□ -1.71
SNF2	YOR290C	YGL041W-A	P0C5N3	154 aa		4.36	□□□□□ -1.71
SNF2	YOR290C	MCM2	P29469	868 aa		4.36	□□□□□ -1.71
SNF2	YOR290C	TBS1	P38114	1094 aa		4.36	□□□□□ -1.71
SNF2	YOR290C	MPH1	P40562	993 aa		4.36	□□□□□ -1.71
SNF2	YOR290C	GLG2	P47011	380 aa		4.36	□□□□□ -1.71
SNF2	YOR290C	NHP10	Q03435	203 aa		4.36	□□□□□ -1.71
SNF2	YOR290C	YPL277C	Q08989	487 aa		4.36	□□□□□ -1.71
SNF2	YOR290C	GNT1	Q12096	491 aa		4.36	□□□□□ -1.71
SNF2	YOR290C	YLR419W	Q06698	1435 aa	Known RBP	4.36	□□□□□ -1.71
SNF2	YOR290C	SNF1	P06782	633 aa	Known RBP	4.36	□□□□□ -1.71
SNF2	YOR290C	UGA3	P26370	528 aa		4.36	□□□□□ -1.71
SNF2	YOR290C	TFC3	P34111	1160 aa		4.36	□□□□□ -1.71
SNF2	YOR290C	CSE4	P36012	229 aa		4.36	□□□□□ -1.71
SNF2	YOR290C	ALP1	P38971	573 aa		4.36	□□□□□ -1.71
SNF2	YOR290C	CHA4	P43634	648 aa		4.36	□□□□□ -1.71
SNF2	YOR290C	NSE3	Q05541	303 aa		4.36	□□□□□ -1.71
SNF2	YOR290C	CFT2	Q12102	859 aa	Predicted RBP	4.36	□□□□□ -1.71
SNF2	YOR290C	ARD1	P07347	238 aa	Predicted RBP	4.36	□□□□□ -1.71
SNF2	YOR290C	SAC7	P17121	654 aa		4.36	□□□□□ -1.71
SNF2	YOR290C	TCD1	P38756	429 aa		4.36	□□□□□ -1.71
SNF2	YOR290C	CCT2	P39076	527 aa	Known RBP	4.36	□□□□□ -1.71
SNF2	YOR290C	ATP25	Q03153	612 aa		4.36	□□□□□ -1.71
SNF2	YOR290C	GAD1	Q04792	585 aa		4.36	□□□□□ -1.71
SNF2	YOR290C	IKI3	Q06706	1349 aa	Known RBP	4.36	□□□□□ -1.71
SNF2	YOR290C	CYM1	P32898	989 aa		4.36	□□□□□ -1.71
SNF2	YOR290C	YRB2	P40517	327 aa		4.36	□□□□□ -1.71
SNF2	YOR290C	PRM2	P40534	656 aa		4.36	□□□□□ -1.71
SNF2	YOR290C	DNM1	P54861	757 aa		4.36	□□□□□ -1.71
SNF2	YOR290C	ADE12	P80210	433 aa	Known RBP	4.36	□□□□□ -1.71
SNF2	YOR290C	BUL2	Q03758	920 aa	Known RBP	4.36	□□□□□ -1.71
SNF2	YOR290C	YML108W	Q03759	105 aa		4.36	□□□□□ -1.71
SNF2	YOR290C	CDC60	P26637	1090 aa	Known RBP	4.35	□□□□□ -1.71
SNF2	YOR290C	RPS7A	P26786	190 aa	Known RBP	4.35	□□□□□ -1.71
SNF2	YOR290C	RAD5	P32849	1169 aa	Predicted RBP	4.35	□□□□□ -1.71
SNF2	YOR290C	RPC34	P32910	317 aa		4.35	□□□□□ -1.71
SNF2	YOR290C	VPS51	P36116	164 aa		4.35	□□□□□ -1.71
SNF2	YOR290C	KAP123	P40069	1113 aa	Known RBP	4.35	□□□□□ -1.71
SNF2	YOR290C	CNN1	P43618	361 aa		4.35	□□□□□ -1.71
SNF2	YOR290C	BER1	Q06688	274 aa	Known RBP	4.35	□□□□□ -1.71
SNF2	YOR290C	CIR2	Q08822	631 aa		4.35	□□□□□ -1.71
SNF2	YOR290C	RVB2	Q12464	471 aa	Known RBP	4.35	□□□□□ -1.71
SNF2	YOR290C	CMR1	Q12510	522 aa	Known RBP	4.35	□□□□□ -1.71
SNF2	YOR290C	FRT1	Q99332	602 aa		4.35	□□□□□ -1.71
SNF2	YOR290C	PWP1	P21304	576 aa	Known RBP	4.35	□□□□□ -1.71
SNF2	YOR290C	TTI1	P36097	1038 aa		4.35	□□□□□ -1.71
SNF2	YOR290C	COS5	P47187	383 aa		4.35	□□□□□ -1.71
SNF2	YOR290C	RRP9	Q06506	573 aa	Known RBP	4.35	□□□□□ -1.71
SNF2	YOR290C	PHO81	P17442	1178 aa		4.35	□□□□□ -1.71
SNF2	YOR290C	MRPL36	P36531	177 aa		4.35	□□□□□ -1.71
SNF2	YOR290C	MTR4	P47047	1073 aa	Known RBP	4.35	□□□□□ -1.71
SNF2	YOR290C	YAF9	P53930	226 aa		4.35	□□□□□ -1.71
SNF2	YOR290C	VPS36	Q06696	566 aa		4.35	□□□□□ -1.71
SNF2	YOR290C	SYO1	Q07395	620 aa		4.35	□□□□□ -1.71
SNF2	YOR290C	NOB1	Q08444	459 aa	Known RBP	4.35	□□□□□ -1.71
SNF2	YOR290C	PRM4	Q12498	284 aa		4.35	□□□□□ -1.71
SNF2	YOR290C	PMS1	P14242	873 aa		4.35	□□□□□ -1.71
SNF2	YOR290C	VPS27	P40343	622 aa	Known RBP	4.35	□□□□□ -1.71
SNF2	YOR290C	TOF1	P53840	1238 aa		4.35	□□□□□ -1.71
SNF2	YOR290C	YLR257W	Q06146	321 aa	Known RBP	4.35	□□□□□ -1.71
SNF2	YOR290C	PRE8	P23639	250 aa		4.34	□□□□□ -1.71
SNF2	YOR290C	NAM9	P27929	486 aa		4.34	□□□□□ -1.71
SNF2	YOR290C	VPH2	P32341	215 aa		4.34	□□□□□ -1.71
SNF2	YOR290C	SPO1	P53541	631 aa		4.34	□□□□□ -1.71
SNF2	YOR290C	SRC1	Q03707	834 aa		4.34	□□□□□ -1.71
SNF2	YOR290C	RAD34	Q06665	692 aa		4.34	□□□□□ -1.71
SNF2	YOR290C	SDO1	Q07953	250 aa	Known RBP	4.34	□□□□□ -1.71
SNF2	YOR290C	LAS1	P36146	502 aa	Predicted RBP	4.34	□□□□□ -1.71
SNF2	YOR290C	RIM2	P38127	377 aa		4.34	□□□□□ -1.71
SNF2	YOR290C	MCM7	P38132	845 aa		4.34	□□□□□ -1.71
SNF2	YOR290C	ERP6	P53198	216 aa		4.34	□□□□□ -1.71
SNF2	YOR290C	USA1	Q03714	838 aa		4.34	□□□□□ -1.71
SNF2	YOR290C	DBP9	Q06218	594 aa	Known RBP	4.34	□□□□□ -1.71
SNF2	YOR290C	MLC2	Q06580	163 aa		4.34	□□□□□ -1.71
SNF2	YOR290C	DCD1	P06773	312 aa		4.34	□□□□□ -1.71
SNF2	YOR290C	DAL5	P15365	543 aa		4.34	□□□□□ -1.71
SNF2	YOR290C	SNT1	P25357	1226 aa		4.34	□□□□□ -1.71
SNF2	YOR290C	MGM1	P32266	881 aa		4.34	□□□□□ -1.71
SNF2	YOR290C	TIF4631	P39935	952 aa	Known RBP	4.34	□□□□□ -1.71
SNF2	YOR290C	RPS0B	P46654	252 aa	Known RBP	4.34	□□□□□ -1.71
SNF2	YOR290C	MRK1	P50873	501 aa		4.34	□□□□□ -1.71
SNF2	YOR290C	YML020W	Q03722	664 aa		4.34	□□□□□ -1.71
SNF2	YOR290C	ACL4	Q03771	387 aa		4.34	□□□□□ -1.71
SNF2	YOR290C	BDF2	Q07442	638 aa		4.34	□□□□□ -1.71
SNF2	YOR290C	NDE2	Q07500	545 aa		4.34	□□□□□ -1.71
SNF2	YOR290C	RPS5	P26783	225 aa	Known RBP	4.34	□□□□□ -1.72
SNF2	YOR290C	DLD1	P32891	587 aa		4.34	□□□□□ -1.72
SNF2	YOR290C	INA22	P40576	216 aa		4.34	□□□□□ -1.72
SNF2	YOR290C	SAS4	Q04003	481 aa		4.34	□□□□□ -1.72
SNF2	YOR290C	RAD33	Q04231	177 aa		4.34	□□□□□ -1.72
SNF2	YOR290C	YDR514C	Q04408	483 aa		4.34	□□□□□ -1.72
SNF2	YOR290C	YPR089W	O13585	888 aa		4.33	□□□□□ -1.72
SNF2	YOR290C	YEF3	P16521	1044 aa	Known RBP	4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 65.3 ms