RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W UFD2P54860 961 aa2.31□□□□□ -2.04
HER1YOR227W CIA1Q05583 330 aa2.31□□□□□ -2.04
HER1YOR227W BDS1Q08347 646 aa2.31□□□□□ -2.04
HER1YOR227W TRP5P00931 707 aaKnown RBP2.3□□□□□ -2.04
HER1YOR227W ECM32P32644 1121 aaKnown RBP2.3□□□□□ -2.04
HER1YOR227W RGD2P43556 714 aa2.3□□□□□ -2.04
HER1YOR227W RPA14P50106 137 aa2.3□□□□□ -2.04
HER1YOR227W PIP2P52960 996 aa2.3□□□□□ -2.04
HER1YOR227W UBX4P54730 416 aa2.3□□□□□ -2.04
HER1YOR227W MDM1Q01846 1127 aa2.3□□□□□ -2.04
HER1YOR227W GUT2P32191 649 aa2.3□□□□□ -2.04
HER1YOR227W PEA2P40091 420 aa2.3□□□□□ -2.04
HER1YOR227W DSD1P53095 428 aa2.3□□□□□ -2.04
HER1YOR227W SPC105P53148 917 aa2.3□□□□□ -2.04
HER1YOR227W TFB2Q02939 513 aa2.3□□□□□ -2.04
HER1YOR227W TRS33Q99394 268 aa2.3□□□□□ -2.04
HER1YOR227W PDC1P06169 563 aaKnown RBP2.3□□□□□ -2.04
HER1YOR227W VAC17P25591 423 aa2.3□□□□□ -2.04
HER1YOR227W MCM5P29496 775 aaKnown RBP2.3□□□□□ -2.04
HER1YOR227W YNL193WP53870 558 aa2.3□□□□□ -2.04
HER1YOR227W MET14Q02196 202 aa2.3□□□□□ -2.04
HER1YOR227W MEH1Q02205 184 aa2.3□□□□□ -2.04
HER1YOR227W ISR1Q06098 443 aaKnown RBP2.3□□□□□ -2.04
HER1YOR227W YPQ2Q06328 317 aa2.3□□□□□ -2.04
HER1YOR227W PSH1Q12161 406 aa2.3□□□□□ -2.04
HER1YOR227W TMA7Q3E764 64 aaKnown RBP2.3□□□□□ -2.04
HER1YOR227W SWI5P08153 709 aa2.29□□□□□ -2.04
HER1YOR227W HSP78P33416 811 aa2.29□□□□□ -2.04
HER1YOR227W MTC2P34246 357 aa2.29□□□□□ -2.04
HER1YOR227W YEL023CP39992 682 aa2.29□□□□□ -2.04
HER1YOR227W MID1P41821 548 aa2.29□□□□□ -2.04
HER1YOR227W EMW1P42842 904 aaKnown RBP2.29□□□□□ -2.04
HER1YOR227W ISM1P48526 1002 aa2.29□□□□□ -2.04
HER1YOR227W YGR125WP53273 1036 aa2.29□□□□□ -2.04
HER1YOR227W CWC24P53769 259 aa2.29□□□□□ -2.04
HER1YOR227W THI73Q07904 523 aa2.29□□□□□ -2.04
HER1YOR227W MPC54Q08550 464 aa2.29□□□□□ -2.04
HER1YOR227W RTP1Q12751 981 aa2.29□□□□□ -2.04
HER1YOR227W MRPL33P20084 86 aa2.29□□□□□ -2.04
HER1YOR227W OPI1P21957 404 aa2.29□□□□□ -2.04
HER1YOR227W NUD1P32336 851 aa2.29□□□□□ -2.04
HER1YOR227W NAB2P32505 525 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
HER1YOR227W PAC1P39946 494 aaKnown RBP2.29□□□□□ -2.04
HER1YOR227W ERO1Q03103 563 aa2.29□□□□□ -2.04
HER1YOR227W UGO1Q03327 502 aa2.29□□□□□ -2.04
HER1YOR227W DAL4Q04895 635 aa2.29□□□□□ -2.04
HER1YOR227W IRC3Q06683 689 aa2.29□□□□□ -2.04
HER1YOR227W RPS6AP0CX37 236 aaKnown RBP2.29□□□□□ -2.04
HER1YOR227W RPS6BP0CX38 236 aaPredicted RBP2.29□□□□□ -2.04
HER1YOR227W TRK1P12685 1235 aa2.29□□□□□ -2.04
HER1YOR227W PRP40P33203 583 aaKnown RBP2.29□□□□□ -2.04
HER1YOR227W APM2P38700 605 aa2.29□□□□□ -2.04
HER1YOR227W UTP7P40055 554 aaKnown RBP2.29□□□□□ -2.04
HER1YOR227W MGS1P40151 587 aa2.29□□□□□ -2.04
HER1YOR227W RSC8P43609 557 aaKnown RBP2.29□□□□□ -2.04
HER1YOR227W SAM37P50110 327 aa2.29□□□□□ -2.04
HER1YOR227W MDM12Q92328 271 aa2.29□□□□□ -2.04
HER1YOR227W HOM3P10869 527 aa2.28□□□□□ -2.04
HER1YOR227W KCC4P25389 1037 aa2.28□□□□□ -2.04
HER1YOR227W VBA5P36172 582 aa2.28□□□□□ -2.04
HER1YOR227W PFF1P38244 976 aa2.28□□□□□ -2.04
HER1YOR227W HSE1P38753 452 aa2.28□□□□□ -2.04
HER1YOR227W GDH3P39708 457 aa2.28□□□□□ -2.04
HER1YOR227W GPP2P40106 250 aaKnown RBP2.28□□□□□ -2.04
HER1YOR227W NDE1P40215 560 aa2.28□□□□□ -2.04
HER1YOR227W ESL1P40456 1118 aa2.28□□□□□ -2.04
HER1YOR227W DAS1P47005 663 aa2.28□□□□□ -2.04
HER1YOR227W YJR115WP47152 169 aa2.28□□□□□ -2.04
HER1YOR227W UTP8P53276 713 aaKnown RBP2.28□□□□□ -2.04
HER1YOR227W YNL050CP53952 270 aa2.28□□□□□ -2.04
HER1YOR227W ALO1P54783 526 aaKnown RBP2.28□□□□□ -2.04
HER1YOR227W ULP1Q02724 621 aa2.28□□□□□ -2.04
HER1YOR227W YDR344CQ05510 147 aa2.28□□□□□ -2.04
HER1YOR227W NOC3Q07896 663 aaPredicted RBP2.28□□□□□ -2.04
HER1YOR227W SDH5Q08230 162 aa2.28□□□□□ -2.04
HER1YOR227W YPL066WQ12194 479 aa2.28□□□□□ -2.04
HER1YOR227W NHA1Q99271 985 aa2.28□□□□□ -2.04
HER1YOR227W FLO11P08640 1367 aa2.28□□□□□ -2.04
HER1YOR227W FLP1P03870 423 aa2.28□□□□□ -2.04
HER1YOR227W MSS18P08593 268 aa2.28□□□□□ -2.04
HER1YOR227W TOP3P13099 656 aa2.28□□□□□ -2.04
HER1YOR227W YKL133CP36066 463 aa2.28□□□□□ -2.04
HER1YOR227W YHL008CP38750 627 aa2.28□□□□□ -2.04
HER1YOR227W SUT1P53032 299 aaKnown RBP2.28□□□□□ -2.04
HER1YOR227W YML131WQ03102 365 aa2.28□□□□□ -2.04
HER1YOR227W SHE9Q04172 456 aa2.28□□□□□ -2.04
HER1YOR227W BSC2Q05611 235 aa2.28□□□□□ -2.04
HER1YOR227W YDR056CQ12025 205 aa2.28□□□□□ -2.04
HER1YOR227W MCD1Q12158 566 aa2.28□□□□□ -2.04
HER1YOR227W SBP1P10080 294 aaKnown RBP2.28□□□□□ -2.05
HER1YOR227W TPM1P17536 199 aaKnown RBP2.28□□□□□ -2.05
HER1YOR227W RAM1P22007 431 aa2.28□□□□□ -2.05
HER1YOR227W AGP1P25376 633 aa2.28□□□□□ -2.05
HER1YOR227W HBS1P32769 611 aaKnown RBP2.28□□□□□ -2.05
HER1YOR227W TFC4P33339 1025 aa2.28□□□□□ -2.05
HER1YOR227W KTR4P38131 464 aa2.28□□□□□ -2.05
HER1YOR227W YHL041WP38730 149 aa2.28□□□□□ -2.05
HER1YOR227W CCC2P38995 1004 aa2.28□□□□□ -2.05
HER1YOR227W TIF4632P39936 914 aaKnown RBP2.28□□□□□ -2.05
HER1YOR227W IES1P43579 692 aa2.28□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms