RNA–Protein interactions for RNA: YOR115C

TRS33, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeast

Gene TRS33, Length 807 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRS33	YOR115C	YRF1-6	P53819	1859 aa		5.71	□□□□□ -1.5
TRS33	YOR115C	NOT3	P06102	836 aa	Known RBP	5.71	□□□□□ -1.5
TRS33	YOR115C	VMA3	P25515	160 aa		5.71	□□□□□ -1.5
TRS33	YOR115C	SMC1	P32908	1225 aa		5.71	□□□□□ -1.5
TRS33	YOR115C	KTR3	P38130	404 aa	Predicted RBP	5.71	□□□□□ -1.5
TRS33	YOR115C	ECM21	P38167	1117 aa	Known RBP	5.71	□□□□□ -1.5
TRS33	YOR115C	UBP12	P39538	1254 aa		5.71	□□□□□ -1.5
TRS33	YOR115C	YBP2	P53169	641 aa		5.71	□□□□□ -1.5
TRS33	YOR115C	RMT2	Q03305	412 aa		5.71	□□□□□ -1.5
TRS33	YOR115C	ATG13	Q06628	738 aa		5.71	□□□□□ -1.5
TRS33	YOR115C	PDR18	P53756	1333 aa		5.71	□□□□□ -1.5
TRS33	YOR115C	RNR2	P09938	399 aa	Known RBP	5.7	□□□□□ -1.5
TRS33	YOR115C	HXT8	P40886	569 aa		5.7	□□□□□ -1.5
TRS33	YOR115C	YJR008W	P47085	338 aa		5.7	□□□□□ -1.5
TRS33	YOR115C	SAM37	P50110	327 aa		5.7	□□□□□ -1.5
TRS33	YOR115C	ALD3	P54114	506 aa		5.7	□□□□□ -1.5
TRS33	YOR115C	TOS4	Q06266	489 aa		5.7	□□□□□ -1.5
TRS33	YOR115C	RIM20	Q12033	661 aa		5.7	□□□□□ -1.5
TRS33	YOR115C	YDR215C	Q12240	137 aa		5.7	□□□□□ -1.5
TRS33	YOR115C	NCB2	Q92317	146 aa		5.7	□□□□□ -1.5
TRS33	YOR115C	DUR1,2	P32528	1835 aa	Known RBP	5.69	□□□□□ -1.5
TRS33	YOR115C	HXK1	P04806	485 aa	Known RBP	5.69	□□□□□ -1.5
TRS33	YOR115C	CYC8	P14922	966 aa		5.69	□□□□□ -1.5
TRS33	YOR115C	FPS1	P23900	669 aa		5.69	□□□□□ -1.5
TRS33	YOR115C	AAP1	P37898	856 aa	Known RBP	5.69	□□□□□ -1.5
TRS33	YOR115C	AMN1	P38285	549 aa	Predicted RBP	5.69	□□□□□ -1.5
TRS33	YOR115C	NTA1	P40354	457 aa		5.69	□□□□□ -1.5
TRS33	YOR115C	KRI1	P42846	591 aa	Known RBP	5.69	□□□□□ -1.5
TRS33	YOR115C	SUT1	P53032	299 aa	Known RBP	5.69	□□□□□ -1.5
TRS33	YOR115C	MRPS35	P53292	345 aa		5.69	□□□□□ -1.5
TRS33	YOR115C	YNL165W	P53891	406 aa		5.69	□□□□□ -1.5
TRS33	YOR115C	ALO1	P54783	526 aa	Known RBP	5.69	□□□□□ -1.5
TRS33	YOR115C	FCP1	Q03254	732 aa		5.69	□□□□□ -1.5
TRS33	YOR115C	YOL098C	Q12496	1037 aa		5.69	□□□□□ -1.5
TRS33	YOR115C	RPS31	P05759	152 aa	Known RBP	5.68	□□□□□ -1.5
TRS33	YOR115C	BIK1	P11709	440 aa		5.68	□□□□□ -1.5
TRS33	YOR115C	MNR2	P35724	969 aa		5.68	□□□□□ -1.5
TRS33	YOR115C	BDH2	P39713	417 aa		5.68	□□□□□ -1.5
TRS33	YOR115C	RPS26A	P39938	119 aa	Known RBP	5.68	□□□□□ -1.5
TRS33	YOR115C	RPS26B	P39939	119 aa	Known RBP	5.68	□□□□□ -1.5
TRS33	YOR115C	CIR1	P42940	261 aa		5.68	□□□□□ -1.5
TRS33	YOR115C	YGL242C	P53066	181 aa		5.68	□□□□□ -1.5
TRS33	YOR115C	PIB2	P53191	635 aa		5.68	□□□□□ -1.5
TRS33	YOR115C	HRQ1	Q05549	1077 aa		5.68	□□□□□ -1.5
TRS33	YOR115C	ESF1	Q06344	628 aa	Known RBP	5.68	□□□□□ -1.5
TRS33	YOR115C	BRE1	Q07457	700 aa	Known RBP	5.68	□□□□□ -1.5
TRS33	YOR115C	SSK22	P25390	1331 aa	Predicted RBP	5.68	□□□□□ -1.5
TRS33	YOR115C	CIC1	P38779	376 aa	Known RBP	5.67	□□□□□ -1.5
TRS33	YOR115C	UTP7	P40055	554 aa	Known RBP	5.67	□□□□□ -1.5
TRS33	YOR115C	RGD2	P43556	714 aa		5.67	□□□□□ -1.5
TRS33	YOR115C	MLC1	P53141	149 aa		5.67	□□□□□ -1.5
TRS33	YOR115C	RSC1	P53236	928 aa		5.67	□□□□□ -1.5
TRS33	YOR115C	PKH1	Q03407	766 aa		5.67	□□□□□ -1.5
TRS33	YOR115C	COG8	Q04632	607 aa		5.67	□□□□□ -1.5
TRS33	YOR115C	PSH1	Q12161	406 aa		5.67	□□□□□ -1.5
TRS33	YOR115C	COB	P00163	385 aa		5.66	□□□□□ -1.5
TRS33	YOR115C	MSN1	P22148	382 aa		5.66	□□□□□ -1.5
TRS33	YOR115C	RVS167	P39743	482 aa	Known RBP	5.66	□□□□□ -1.5
TRS33	YOR115C	ALA1	P40825	983 aa	Known RBP	5.66	□□□□□ -1.5
TRS33	YOR115C	HST1	P53685	503 aa		5.66	□□□□□ -1.5
TRS33	YOR115C	ALD6	P54115	500 aa	Known RBP	5.66	□□□□□ -1.5
TRS33	YOR115C	NOC3	Q07896	663 aa	Predicted RBP	5.66	□□□□□ -1.5
TRS33	YOR115C	MCA1	Q08601	432 aa		5.66	□□□□□ -1.5
TRS33	YOR115C	SSP2	Q08646	371 aa		5.66	□□□□□ -1.5
TRS33	YOR115C	CLN2	P20438	545 aa		5.65	□□□□□ -1.5
TRS33	YOR115C	LDH1	P38139	375 aa		5.65	□□□□□ -1.5
TRS33	YOR115C	DYS1	P38791	387 aa		5.65	□□□□□ -1.5
TRS33	YOR115C	VAC8	P39968	578 aa		5.65	□□□□□ -1.5
TRS33	YOR115C	LSB6	P42951	607 aa		5.65	□□□□□ -1.5
TRS33	YOR115C	IOC3	P43596	787 aa		5.65	□□□□□ -1.5
TRS33	YOR115C	YJL049W	P47048	450 aa		5.65	□□□□□ -1.5
TRS33	YOR115C	BSC2	Q05611	235 aa		5.65	□□□□□ -1.5
TRS33	YOR115C	IMH1	Q06704	911 aa	Known RBP	5.65	□□□□□ -1.5
TRS33	YOR115C	SSF2	Q12153	453 aa	Predicted RBP	5.65	□□□□□ -1.5
TRS33	YOR115C	PGA3	Q12746	312 aa	Known RBP	5.65	□□□□□ -1.5
TRS33	YOR115C	RPN12	P32496	274 aa		5.64	□□□□□ -1.51
TRS33	YOR115C	SPC42	P36094	363 aa		5.64	□□□□□ -1.51
TRS33	YOR115C	DID4	P36108	232 aa		5.64	□□□□□ -1.51
TRS33	YOR115C	IRS4	P36115	615 aa	Known RBP	5.64	□□□□□ -1.51
TRS33	YOR115C	SHM1	P37292	490 aa	Predicted RBP	5.64	□□□□□ -1.51
TRS33	YOR115C	TAT1	P38085	619 aa		5.64	□□□□□ -1.51
TRS33	YOR115C	RKM3	P38222	552 aa		5.64	□□□□□ -1.51
TRS33	YOR115C	RAD55	P38953	406 aa		5.64	□□□□□ -1.51
TRS33	YOR115C	FAA3	P39002	694 aa		5.64	□□□□□ -1.51
TRS33	YOR115C	QDR2	P40474	542 aa		5.64	□□□□□ -1.51
TRS33	YOR115C	DOT5	P40553	215 aa		5.64	□□□□□ -1.51
TRS33	YOR115C	JJJ2	P46997	583 aa		5.64	□□□□□ -1.51
TRS33	YOR115C	ENT3	P47160	408 aa		5.64	□□□□□ -1.51
TRS33	YOR115C	YGL082W	P53155	381 aa		5.64	□□□□□ -1.51
TRS33	YOR115C	YAF9	P53930	226 aa		5.64	□□□□□ -1.51
TRS33	YOR115C	UBP16	Q02863	499 aa		5.64	□□□□□ -1.51
TRS33	YOR115C	PEX19	Q07418	342 aa		5.64	□□□□□ -1.51
TRS33	YOR115C	Q0182	Q9ZZW1	134 aa		5.64	□□□□□ -1.51
TRS33	YOR115C	FLP1	P03870	423 aa		5.63	□□□□□ -1.51
TRS33	YOR115C	RPL19A	P0CX82	189 aa	Known RBP	5.63	□□□□□ -1.51
TRS33	YOR115C	RPL19B	P0CX83	189 aa	Predicted RBP	5.63	□□□□□ -1.51
TRS33	YOR115C	MLF3	P32047	452 aa		5.63	□□□□□ -1.51
TRS33	YOR115C	IRE1	P32361	1115 aa		5.63	□□□□□ -1.51
TRS33	YOR115C	TAT2	P38967	592 aa		5.63	□□□□□ -1.51
TRS33	YOR115C	PSY2	P40164	858 aa		5.63	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 56.7 ms