RNA–Protein interactions for RNA: YOL022C

TSR4, Cytoplasmic protein required for correct processing of 20S pre-rRNA, yeast

Gene TSR4, Length 1,227 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR4	YOL022C	NIT1	P40447	199 aa		4.99	□□□□□ -1.61
TSR4	YOL022C	MPH1	P40562	993 aa		4.99	□□□□□ -1.61
TSR4	YOL022C	TNA1	P53322	534 aa		4.99	□□□□□ -1.61
TSR4	YOL022C	SPO21	Q12411	609 aa		4.99	□□□□□ -1.61
TSR4	YOL022C	CNN1	P43618	361 aa		4.98	□□□□□ -1.61
TSR4	YOL022C	EEB1	Q02891	456 aa		4.98	□□□□□ -1.61
TSR4	YOL022C	HOS3	Q02959	697 aa	Known RBP	4.98	□□□□□ -1.61
TSR4	YOL022C	COQ4	O13525	335 aa		4.97	□□□□□ -1.61
TSR4	YOL022C	YER152C	P10356	443 aa		4.97	□□□□□ -1.61
TSR4	YOL022C	CDC34	P14682	295 aa		4.97	□□□□□ -1.61
TSR4	YOL022C	GAS1	P22146	559 aa	Known RBP	4.97	□□□□□ -1.61
TSR4	YOL022C	PIK1	P39104	1066 aa		4.97	□□□□□ -1.61
TSR4	YOL022C	YFL054C	P43549	646 aa		4.97	□□□□□ -1.61
TSR4	YOL022C	TIF35	Q04067	274 aa	Known RBP	4.97	□□□□□ -1.61
TSR4	YOL022C	MLS1	P30952	554 aa		4.96	□□□□□ -1.62
TSR4	YOL022C	AIM26	P32858	118 aa		4.96	□□□□□ -1.62
TSR4	YOL022C	ABZ1	P37254	787 aa	Predicted RBP	4.96	□□□□□ -1.62
TSR4	YOL022C	MET10	P39692	1035 aa		4.96	□□□□□ -1.62
TSR4	YOL022C	PET112	P33893	541 aa		4.95	□□□□□ -1.62
TSR4	YOL022C	MNR2	P35724	969 aa		4.95	□□□□□ -1.62
TSR4	YOL022C	SNU71	P53207	620 aa	Known RBP	4.95	□□□□□ -1.62
TSR4	YOL022C	TRP2	P00899	507 aa	Known RBP	4.94	□□□□□ -1.62
TSR4	YOL022C	RAD27	P26793	382 aa		4.94	□□□□□ -1.62
TSR4	YOL022C	LYP1	P32487	611 aa		4.94	□□□□□ -1.62
TSR4	YOL022C	THI80	P35202	319 aa		4.94	□□□□□ -1.62
TSR4	YOL022C	CCZ1	P38273	704 aa		4.94	□□□□□ -1.62
TSR4	YOL022C	ETP1	P38748	585 aa	Known RBP	4.94	□□□□□ -1.62
TSR4	YOL022C	HNT2	P49775	206 aa		4.94	□□□□□ -1.62
TSR4	YOL022C	PRP43	P53131	767 aa	Known RBP	4.94	□□□□□ -1.62
TSR4	YOL022C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
TSR4	YOL022C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
TSR4	YOL022C	NBA1	Q08229	501 aa	Known RBP	4.94	□□□□□ -1.62
TSR4	YOL022C	TMA46	Q12000	345 aa	Known RBP	4.94	□□□□□ -1.62
TSR4	YOL022C	UBP5	P39944	805 aa		4.93	□□□□□ -1.62
TSR4	YOL022C	MRPL22	P53881	309 aa		4.93	□□□□□ -1.62
TSR4	YOL022C	SPS1	P08458	490 aa		4.92	□□□□□ -1.62
TSR4	YOL022C	PRP6	P19735	899 aa	Predicted RBP	4.92	□□□□□ -1.62
TSR4	YOL022C	NOP7	P53261	605 aa	Known RBP	4.92	□□□□□ -1.62
TSR4	YOL022C	GNT1	Q12096	491 aa		4.92	□□□□□ -1.62
TSR4	YOL022C	YPL066W	Q12194	479 aa		4.92	□□□□□ -1.62
TSR4	YOL022C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
TSR4	YOL022C	PAM1	P37304	830 aa	Known RBP	4.91	□□□□□ -1.62
TSR4	YOL022C	SEC26	P41810	973 aa	Known RBP	4.91	□□□□□ -1.62
TSR4	YOL022C	ENV11	P53246	860 aa		4.91	□□□□□ -1.62
TSR4	YOL022C	RIB2	Q12362	591 aa	Known RBP	4.91	□□□□□ -1.62
TSR4	YOL022C	DBP2	P24783	546 aa	Known RBP	4.9	□□□□□ -1.63
TSR4	YOL022C	MCM7	P38132	845 aa		4.9	□□□□□ -1.63
TSR4	YOL022C	AIM3	P38266	947 aa	Known RBP	4.9	□□□□□ -1.63
TSR4	YOL022C	FAA4	P47912	694 aa	Known RBP	4.9	□□□□□ -1.63
TSR4	YOL022C	FOL2	P51601	243 aa	Known RBP	4.9	□□□□□ -1.63
TSR4	YOL022C	YGR053C	P53234	283 aa		4.9	□□□□□ -1.63
TSR4	YOL022C	SNO2	P53823	222 aa		4.9	□□□□□ -1.63
TSR4	YOL022C	RPL11A	P0C0W9	174 aa	Known RBP	4.89	□□□□□ -1.63
TSR4	YOL022C	BAS1	P22035	811 aa		4.89	□□□□□ -1.63
TSR4	YOL022C	MOT2	P34909	587 aa	Known RBP	4.89	□□□□□ -1.63
TSR4	YOL022C	PNT1	P38969	423 aa		4.89	□□□□□ -1.63
TSR4	YOL022C	MXR1	P40029	184 aa		4.89	□□□□□ -1.63
TSR4	YOL022C	TYW3	P53177	273 aa		4.89	□□□□□ -1.63
TSR4	YOL022C	YDR132C	Q03900	495 aa		4.89	□□□□□ -1.63
TSR4	YOL022C	ATG13	Q06628	738 aa		4.89	□□□□□ -1.63
TSR4	YOL022C	RPL11B	Q3E757	174 aa	Predicted RBP	4.89	□□□□□ -1.63
TSR4	YOL022C	INO1	P11986	533 aa		4.88	□□□□□ -1.63
TSR4	YOL022C	SLA2	P33338	968 aa		4.88	□□□□□ -1.63
TSR4	YOL022C	RIM8	P53179	542 aa		4.88	□□□□□ -1.63
TSR4	YOL022C	VPS16	Q03308	798 aa		4.88	□□□□□ -1.63
TSR4	YOL022C	SVF1	Q05515	481 aa		4.88	□□□□□ -1.63
TSR4	YOL022C	RSB1	Q08417	382 aa		4.88	□□□□□ -1.63
TSR4	YOL022C	YPL277C	Q08989	487 aa		4.88	□□□□□ -1.63
TSR4	YOL022C	RKM4	Q12504	494 aa		4.88	□□□□□ -1.63
TSR4	YOL022C	SOD2	P00447	233 aa		4.87	□□□□□ -1.63
TSR4	YOL022C	SRM1	P21827	482 aa		4.87	□□□□□ -1.63
TSR4	YOL022C	SIP5	P40210	489 aa	Known RBP	4.87	□□□□□ -1.63
TSR4	YOL022C	ESC2	Q06340	456 aa		4.87	□□□□□ -1.63
TSR4	YOL022C	PIN2	Q12057	282 aa		4.87	□□□□□ -1.63
TSR4	YOL022C	NAP1	P25293	417 aa	Known RBP	4.86	□□□□□ -1.63
TSR4	YOL022C	ORC1	P54784	914 aa	Predicted RBP	4.86	□□□□□ -1.63
TSR4	YOL022C	ACM1	Q08981	209 aa		4.86	□□□□□ -1.63
TSR4	YOL022C	CYC1	P00044	109 aa	Predicted RBP	4.85	□□□□□ -1.63
TSR4	YOL022C	RPS13	P05756	151 aa	Known RBP	4.85	□□□□□ -1.63
TSR4	YOL022C	CLN2	P20438	545 aa		4.85	□□□□□ -1.63
TSR4	YOL022C	UGA2	P38067	497 aa		4.85	□□□□□ -1.63
TSR4	YOL022C	FLR1	P38124	548 aa		4.85	□□□□□ -1.63
TSR4	YOL022C	TAF1	P46677	1066 aa		4.85	□□□□□ -1.63
TSR4	YOL022C	GDE1	Q02979	1223 aa		4.85	□□□□□ -1.63
TSR4	YOL022C	PLB2	Q03674	706 aa		4.85	□□□□□ -1.63
TSR4	YOL022C	SIZ1	Q04195	904 aa		4.85	□□□□□ -1.63
TSR4	YOL022C	YLR225C	Q05948	407 aa	Known RBP	4.85	□□□□□ -1.63
TSR4	YOL022C	SGD1	Q06132	899 aa		4.85	□□□□□ -1.63
TSR4	YOL022C	ESC8	Q08119	714 aa		4.85	□□□□□ -1.63
TSR4	YOL022C	SVS1	Q12254	260 aa		4.85	□□□□□ -1.63
TSR4	YOL022C	BI4	P03879	638 aa		4.84	□□□□□ -1.63
TSR4	YOL022C	ACE2	P21192	770 aa		4.84	□□□□□ -1.63
TSR4	YOL022C	YKL107W	P34251	309 aa		4.84	□□□□□ -1.63
TSR4	YOL022C	RFC5	P38251	354 aa		4.84	□□□□□ -1.63
TSR4	YOL022C	LAM1	P38851	1228 aa		4.84	□□□□□ -1.63
TSR4	YOL022C	GEM1	P39722	662 aa		4.84	□□□□□ -1.63
TSR4	YOL022C	YGL176C	P46945	554 aa		4.84	□□□□□ -1.63
TSR4	YOL022C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
TSR4	YOL022C	DUS4	Q06063	367 aa		4.84	□□□□□ -1.63
TSR4	YOL022C	SPP382	Q06411	708 aa	Predicted RBP	4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms