RNA–Protein interactions for RNA: YNL172W

APC1, Transcript of Largest subunit of the Anaphase-Promoting Complex/Cyclosome, yeast

Gene APC1, Length 5,247 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APC1	YNL172W	THR4	P16120	514 aa	Known RBP	4.9	□□□□□ -1.63
APC1	YNL172W	MAK5	P38112	773 aa	Predicted RBP	4.9	□□□□□ -1.63
APC1	YNL172W	MSR1	P38714	643 aa		4.9	□□□□□ -1.63
APC1	YNL172W	YJR008W	P47085	338 aa		4.9	□□□□□ -1.63
APC1	YNL172W	YJR079W	P47126	109 aa		4.9	□□□□□ -1.63
APC1	YNL172W	ART5	P53244	586 aa	Known RBP	4.9	□□□□□ -1.63
APC1	YNL172W	DSE4	P53753	1117 aa		4.9	□□□□□ -1.63
APC1	YNL172W	MSC2	Q03455	724 aa		4.9	□□□□□ -1.63
APC1	YNL172W	RAD59	Q12223	238 aa		4.9	□□□□□ -1.63
APC1	YNL172W	KIN1	P13185	1064 aa		4.9	□□□□□ -1.63
APC1	YNL172W	MNN4	P36044	1178 aa		4.9	□□□□□ -1.63
APC1	YNL172W	ISM1	P48526	1002 aa		4.9	□□□□□ -1.63
APC1	YNL172W	RIT1	P23796	513 aa		4.9	□□□□□ -1.63
APC1	YNL172W	KTR1	P27810	393 aa	Known RBP	4.9	□□□□□ -1.63
APC1	YNL172W	GRS1	P38088	690 aa	Known RBP	4.9	□□□□□ -1.63
APC1	YNL172W	ECM21	P38167	1117 aa	Known RBP	4.9	□□□□□ -1.63
APC1	YNL172W	YBR238C	P38330	731 aa	Known RBP	4.9	□□□□□ -1.63
APC1	YNL172W	SMC2	P38989	1170 aa	Known RBP	4.9	□□□□□ -1.63
APC1	YNL172W	SAK1	P38990	1142 aa		4.9	□□□□□ -1.63
APC1	YNL172W	UBP9	P39967	754 aa		4.9	□□□□□ -1.63
APC1	YNL172W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
APC1	YNL172W	CAF20	P12962	161 aa	Known RBP	4.89	□□□□□ -1.63
APC1	YNL172W	ECM30	Q06673	1274 aa		4.89	□□□□□ -1.63
APC1	YNL172W	RTT109	Q07794	436 aa		4.89	□□□□□ -1.63
APC1	YNL172W	SMC6	Q12749	1114 aa		4.89	□□□□□ -1.63
APC1	YNL172W	VPS5	Q92331	675 aa		4.89	□□□□□ -1.63
APC1	YNL172W	MIH1	P23748	554 aa		4.89	□□□□□ -1.63
APC1	YNL172W	TVP38	P36164	337 aa		4.89	□□□□□ -1.63
APC1	YNL172W	CCT3	P39077	534 aa	Known RBP	4.89	□□□□□ -1.63
APC1	YNL172W	CSR1	Q06705	408 aa	Known RBP	4.89	□□□□□ -1.63
APC1	YNL172W	GUD1	Q07729	489 aa		4.89	□□□□□ -1.63
APC1	YNL172W	ATP1	P07251	545 aa	Known RBP	4.89	□□□□□ -1.63
APC1	YNL172W	MAS1	P10507	462 aa		4.89	□□□□□ -1.63
APC1	YNL172W	CBF2	P32504	956 aa		4.89	□□□□□ -1.63
APC1	YNL172W	TAF1	P46677	1066 aa		4.89	□□□□□ -1.63
APC1	YNL172W	MTF2	P10849	440 aa		4.88	□□□□□ -1.63
APC1	YNL172W	VMA1	P17255	1071 aa	Known RBP	4.88	□□□□□ -1.63
APC1	YNL172W	IMG2	P25642	146 aa	Predicted RBP	4.88	□□□□□ -1.63
APC1	YNL172W	MOT2	P34909	587 aa	Known RBP	4.88	□□□□□ -1.63
APC1	YNL172W	CRG1	P38892	291 aa	RIP-Chip data	4.88	□□□□□ -1.63	RIP-Chip
APC1	YNL172W	YFL034W	P43564	1073 aa		4.88	□□□□□ -1.63
APC1	YNL172W	FYV8	P46949	817 aa	Known RBP	4.88	□□□□□ -1.63
APC1	YNL172W	ENT3	P47160	408 aa		4.88	□□□□□ -1.63
APC1	YNL172W	YNL193W	P53870	558 aa		4.88	□□□□□ -1.63
APC1	YNL172W	RPS19A	P07280	144 aa	Known RBP	4.88	□□□□□ -1.63
APC1	YNL172W	RPS19B	P07281	144 aa	Predicted RBP	4.88	□□□□□ -1.63
APC1	YNL172W	SPC110	P32380	944 aa		4.88	□□□□□ -1.63
APC1	YNL172W	RAD24	P32641	659 aa		4.88	□□□□□ -1.63
APC1	YNL172W	XRS2	P33301	854 aa		4.88	□□□□□ -1.63
APC1	YNL172W	LCD1	Q04377	747 aa		4.88	□□□□□ -1.63
APC1	YNL172W	ADY4	Q05955	493 aa		4.88	□□□□□ -1.63
APC1	YNL172W	TGL5	Q12043	749 aa		4.88	□□□□□ -1.63
APC1	YNL172W	PUS1	Q12211	544 aa	Known RBP	4.88	□□□□□ -1.63
APC1	YNL172W	PCK1	P10963	549 aa		4.88	□□□□□ -1.63
APC1	YNL172W	SPB4	P25808	606 aa	Predicted RBP	4.88	□□□□□ -1.63
APC1	YNL172W	MSS51	P32335	436 aa		4.88	□□□□□ -1.63
APC1	YNL172W	YIR042C	P40586	236 aa		4.88	□□□□□ -1.63
APC1	YNL172W	SKP2	P42843	763 aa		4.88	□□□□□ -1.63
APC1	YNL172W	CEF1	Q03654	590 aa	Predicted RBP	4.88	□□□□□ -1.63
APC1	YNL172W	OM45	P16547	393 aa		4.88	□□□□□ -1.63
APC1	YNL172W	GSF2	Q04697	403 aa	Known RBP	4.88	□□□□□ -1.63
APC1	YNL172W	GPI13	Q07830	1017 aa		4.88	□□□□□ -1.63
APC1	YNL172W	YOL036W	Q08206	761 aa		4.88	□□□□□ -1.63
APC1	YNL172W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
APC1	YNL172W	YOL098C	Q12496	1037 aa		4.88	□□□□□ -1.63
APC1	YNL172W	NNF1	P47149	201 aa		4.87	□□□□□ -1.63
APC1	YNL172W	MDM1	Q01846	1127 aa		4.87	□□□□□ -1.63
APC1	YNL172W	TOF2	Q02208	771 aa		4.87	□□□□□ -1.63
APC1	YNL172W	SIZ1	Q04195	904 aa		4.87	□□□□□ -1.63
APC1	YNL172W	RAD18	P10862	487 aa		4.87	□□□□□ -1.63
APC1	YNL172W	MAS2	P11914	482 aa		4.87	□□□□□ -1.63
APC1	YNL172W	TRK1	P12685	1235 aa		4.87	□□□□□ -1.63
APC1	YNL172W	UBC1	P21734	215 aa	Known RBP	4.87	□□□□□ -1.63
APC1	YNL172W	PUP3	P25451	205 aa	Known RBP	4.87	□□□□□ -1.63
APC1	YNL172W	GCD7	P32502	381 aa	Predicted RBP	4.87	□□□□□ -1.63
APC1	YNL172W	MOB1	P40484	314 aa		4.87	□□□□□ -1.63
APC1	YNL172W	RSM7	P47150	247 aa		4.87	□□□□□ -1.63
APC1	YNL172W	YGL140C	P53120	1219 aa		4.87	□□□□□ -1.63
APC1	YNL172W	BUL2	Q03758	920 aa	Known RBP	4.87	□□□□□ -1.63
APC1	YNL172W	TLG2	Q08144	397 aa		4.87	□□□□□ -1.63
APC1	YNL172W	STN1	P38960	494 aa		4.87	□□□□□ -1.63
APC1	YNL172W	LSB6	P42951	607 aa		4.87	□□□□□ -1.63
APC1	YNL172W	BIO5	P53744	561 aa	Known RBP	4.87	□□□□□ -1.63
APC1	YNL172W	YDR306C	Q06640	478 aa		4.87	□□□□□ -1.63
APC1	YNL172W	NOC3	Q07896	663 aa	Predicted RBP	4.87	□□□□□ -1.63
APC1	YNL172W	SEC18	P18759	758 aa	Known RBP	4.87	□□□□□ -1.63
APC1	YNL172W	BMH2	P34730	273 aa	Known RBP	4.87	□□□□□ -1.63
APC1	YNL172W	REG2	P38232	338 aa		4.87	□□□□□ -1.63
APC1	YNL172W	YHL017W	P38745	532 aa		4.87	□□□□□ -1.63
APC1	YNL172W	NMD3	P38861	518 aa	Known RBP	4.87	□□□□□ -1.63
APC1	YNL172W	AIM21	P40563	679 aa		4.87	□□□□□ -1.63
APC1	YNL172W	CUL3	P53202	744 aa		4.87	□□□□□ -1.63
APC1	YNL172W	TIF35	Q04067	274 aa	Known RBP	4.87	□□□□□ -1.63
APC1	YNL172W	PHM6	Q05637	104 aa		4.87	□□□□□ -1.63
APC1	YNL172W	CRD1	Q07560	283 aa		4.87	□□□□□ -1.63
APC1	YNL172W	SRD1	P09007	221 aa		4.86	□□□□□ -1.63
APC1	YNL172W	GAP1	P19145	602 aa	Predicted RBP	4.86	□□□□□ -1.63
APC1	YNL172W	SAM2	P19358	384 aa	Known RBP	4.86	□□□□□ -1.63
APC1	YNL172W	NUP84	P52891	726 aa		4.86	□□□□□ -1.63
APC1	YNL172W	RPT3	P33298	428 aa	Known RBP	4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms