RNA–Protein interactions for RNA: YNL153C

GIM3, Transcript of Subunit of the heterohexameric cochaperone prefoldin complex, yeast

Gene GIM3, Length 390 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GIM3	YNL153C	YFL054C	P43549	646 aa		5.11	□□□□□ -1.59
GIM3	YNL153C	FAA4	P47912	694 aa	Known RBP	5.11	□□□□□ -1.59
GIM3	YNL153C	HOS3	Q02959	697 aa	Known RBP	5.11	□□□□□ -1.59
GIM3	YNL153C	GDE1	Q02979	1223 aa		5.11	□□□□□ -1.59
GIM3	YNL153C	TRP2	P00899	507 aa	Known RBP	5.1	□□□□□ -1.59
GIM3	YNL153C	YER152C	P10356	443 aa		5.1	□□□□□ -1.59
GIM3	YNL153C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.1	□□□□□ -1.59	not detected
GIM3	YNL153C	TYW3	P53177	273 aa		5.1	□□□□□ -1.59
GIM3	YNL153C	YPL260W	Q08977	551 aa		5.1	□□□□□ -1.59
GIM3	YNL153C	LPX1	Q12405	387 aa	Known RBP	5.1	□□□□□ -1.59
GIM3	YNL153C	COQ4	O13525	335 aa		5.09	□□□□□ -1.59
GIM3	YNL153C	LYP1	P32487	611 aa		5.09	□□□□□ -1.59
GIM3	YNL153C	RGD1	P38339	666 aa		5.09	□□□□□ -1.59
GIM3	YNL153C	MPH1	P40562	993 aa		5.09	□□□□□ -1.59
GIM3	YNL153C	AVT1	P47082	602 aa		5.09	□□□□□ -1.59
GIM3	YNL153C	TNA1	P53322	534 aa		5.09	□□□□□ -1.59
GIM3	YNL153C	YLR225C	Q05948	407 aa	Known RBP	5.09	□□□□□ -1.59
GIM3	YNL153C	DFG16	Q99234	619 aa		5.09	□□□□□ -1.59
GIM3	YNL153C	INO1	P11986	533 aa		5.08	□□□□□ -1.6
GIM3	YNL153C	CLN2	P20438	545 aa		5.08	□□□□□ -1.6
GIM3	YNL153C	MET10	P39692	1035 aa		5.08	□□□□□ -1.6
GIM3	YNL153C	VPS16	Q03308	798 aa		5.08	□□□□□ -1.6
GIM3	YNL153C	ESC2	Q06340	456 aa		5.08	□□□□□ -1.6
GIM3	YNL153C	RSC58	Q07979	502 aa		5.08	□□□□□ -1.6
GIM3	YNL153C	SRO9	P25567	434 aa	Known RBP	5.07	□□□□□ -1.6
GIM3	YNL153C	SEG2	P34250	1132 aa		5.07	□□□□□ -1.6
GIM3	YNL153C	PAM1	P37304	830 aa	Known RBP	5.07	□□□□□ -1.6
GIM3	YNL153C	VAC8	P39968	578 aa		5.07	□□□□□ -1.6
GIM3	YNL153C	SVF1	Q05515	481 aa		5.07	□□□□□ -1.6
GIM3	YNL153C	NBA1	Q08229	501 aa	Known RBP	5.07	□□□□□ -1.6
GIM3	YNL153C	RSB1	Q08417	382 aa		5.07	□□□□□ -1.6
GIM3	YNL153C	PIN2	Q12057	282 aa		5.07	□□□□□ -1.6
GIM3	YNL153C	SNF5	P18480	905 aa		5.06	□□□□□ -1.6
GIM3	YNL153C	PRI2	P20457	528 aa		5.06	□□□□□ -1.6
GIM3	YNL153C	BAS1	P22035	811 aa		5.06	□□□□□ -1.6
GIM3	YNL153C	CCZ1	P38273	704 aa		5.06	□□□□□ -1.6
GIM3	YNL153C	ETP1	P38748	585 aa	Known RBP	5.06	□□□□□ -1.6
GIM3	YNL153C	MXR1	P40029	184 aa		5.06	□□□□□ -1.6
GIM3	YNL153C	HNT2	P49775	206 aa		5.06	□□□□□ -1.6
GIM3	YNL153C	YGR053C	P53234	283 aa		5.06	□□□□□ -1.6
GIM3	YNL153C	ALD6	P54115	500 aa	Known RBP	5.06	□□□□□ -1.6
GIM3	YNL153C	SPS1	P08458	490 aa		5.05	□□□□□ -1.6
GIM3	YNL153C	ABD1	P32783	436 aa	Predicted RBP	5.05	□□□□□ -1.6
GIM3	YNL153C	RPN3	P40016	523 aa	Known RBP	5.05	□□□□□ -1.6
GIM3	YNL153C	YGL176C	P46945	554 aa		5.05	□□□□□ -1.6
GIM3	YNL153C	FOL2	P51601	243 aa	Known RBP	5.05	□□□□□ -1.6
GIM3	YNL153C	SPO20	Q04359	397 aa		5.05	□□□□□ -1.6
GIM3	YNL153C	FAL1	Q12099	399 aa	Known RBP	5.05	□□□□□ -1.6
GIM3	YNL153C	YPL066W	Q12194	479 aa		5.05	□□□□□ -1.6
GIM3	YNL153C	DBP2	P24783	546 aa	Known RBP	5.04	□□□□□ -1.6
GIM3	YNL153C	NAP1	P25293	417 aa	Known RBP	5.04	□□□□□ -1.6
GIM3	YNL153C	BAP2	P38084	609 aa		5.04	□□□□□ -1.6
GIM3	YNL153C	SPP382	Q06411	708 aa	Predicted RBP	5.04	□□□□□ -1.6
GIM3	YNL153C	RPL11A	P0C0W9	174 aa	Known RBP	5.03	□□□□□ -1.6
GIM3	YNL153C	RNQ1	P25367	405 aa		5.03	□□□□□ -1.6
GIM3	YNL153C	YKL107W	P34251	309 aa		5.03	□□□□□ -1.6
GIM3	YNL153C	PIK1	P39104	1066 aa		5.03	□□□□□ -1.6
GIM3	YNL153C	ORC3	P54790	616 aa		5.03	□□□□□ -1.6
GIM3	YNL153C	GNT1	Q12096	491 aa		5.03	□□□□□ -1.6
GIM3	YNL153C	RPL11B	Q3E757	174 aa	Predicted RBP	5.03	□□□□□ -1.6
GIM3	YNL153C	GAS1	P22146	559 aa	Known RBP	5.02	□□□□□ -1.61
GIM3	YNL153C	ECL1	P48235	211 aa		5.02	□□□□□ -1.61
GIM3	YNL153C	YDL177C	Q12257	170 aa		5.02	□□□□□ -1.61
GIM3	YNL153C	RKM4	Q12504	494 aa		5.02	□□□□□ -1.61
GIM3	YNL153C	YKL069W	P36088	180 aa		5.01	□□□□□ -1.61
GIM3	YNL153C	UGA2	P38067	497 aa		5.01	□□□□□ -1.61
GIM3	YNL153C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	5.01	□□□□□ -1.61	not detected
GIM3	YNL153C	OPI10	Q08202	246 aa		5.01	□□□□□ -1.61
GIM3	YNL153C	ABZ1	P37254	787 aa	Predicted RBP	5	□□□□□ -1.61
GIM3	YNL153C	NOP7	P53261	605 aa	Known RBP	5	□□□□□ -1.61
GIM3	YNL153C	PNT1	P38969	423 aa		4.99	□□□□□ -1.61
GIM3	YNL153C	MBP1	P39678	833 aa		4.99	□□□□□ -1.61
GIM3	YNL153C	SIP5	P40210	489 aa	Known RBP	4.99	□□□□□ -1.61
GIM3	YNL153C	SEC26	P41810	973 aa	Known RBP	4.99	□□□□□ -1.61
GIM3	YNL153C	MRPL22	P53881	309 aa		4.99	□□□□□ -1.61
GIM3	YNL153C	ACM1	Q08981	209 aa		4.99	□□□□□ -1.61
GIM3	YNL153C	SVS1	Q12254	260 aa		4.99	□□□□□ -1.61
GIM3	YNL153C	RFC5	P38251	354 aa		4.98	□□□□□ -1.61
GIM3	YNL153C	CYC1	P00044	109 aa	Predicted RBP	4.97	□□□□□ -1.61
GIM3	YNL153C	BI4	P03879	638 aa		4.97	□□□□□ -1.61
GIM3	YNL153C	APL1	P27351	700 aa		4.97	□□□□□ -1.61
GIM3	YNL153C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
GIM3	YNL153C	VBA5	P36172	582 aa		4.97	□□□□□ -1.61
GIM3	YNL153C	GEM1	P39722	662 aa		4.97	□□□□□ -1.61
GIM3	YNL153C	AGP1	P25376	633 aa		4.96	□□□□□ -1.62
GIM3	YNL153C	SBA1	P28707	216 aa	Known RBP	4.96	□□□□□ -1.62
GIM3	YNL153C	SLA2	P33338	968 aa		4.96	□□□□□ -1.62
GIM3	YNL153C	IRC24	P40580	263 aa		4.96	□□□□□ -1.62
GIM3	YNL153C	PRP43	P53131	767 aa	Known RBP	4.96	□□□□□ -1.62
GIM3	YNL153C	SNO2	P53823	222 aa		4.96	□□□□□ -1.62
GIM3	YNL153C	ROT1	Q03691	256 aa		4.96	□□□□□ -1.62
GIM3	YNL153C	RSM24	Q03976	319 aa		4.96	□□□□□ -1.62
GIM3	YNL153C	CDA2	Q06703	312 aa		4.96	□□□□□ -1.62
GIM3	YNL153C	CMP2	P14747	604 aa		4.95	□□□□□ -1.62
GIM3	YNL153C	ELM1	P32801	640 aa		4.95	□□□□□ -1.62
GIM3	YNL153C	TSA1	P34760	196 aa	Known RBP	4.95	□□□□□ -1.62
GIM3	YNL153C	AIM3	P38266	947 aa	Known RBP	4.95	□□□□□ -1.62
GIM3	YNL153C	TDA5	Q06417	326 aa	Known RBP	4.95	□□□□□ -1.62
GIM3	YNL153C	YOR352W	Q08816	343 aa		4.95	□□□□□ -1.62
GIM3	YNL153C	WRS1	Q12109	432 aa	Known RBP	4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 67.3 ms