RNA–Protein interactions for RNA: YNL132W

KRE33, Transcript of Protein required for biogenesis of the small ribosomal subunit, yeast

Gene KRE33, Length 3,171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KRE33	YNL132W	SNF2	P22082	1703 aa		2.7	□□□□□ -1.98
KRE33	YNL132W	YMR084W	A2P2R3	262 aa		2.7	□□□□□ -1.98
KRE33	YNL132W	RGP1	P16664	663 aa		2.7	□□□□□ -1.98
KRE33	YNL132W	YKL133C	P36066	463 aa		2.7	□□□□□ -1.98
KRE33	YNL132W	SAP190	P36123	1033 aa		2.7	□□□□□ -1.98
KRE33	YNL132W	EDS1	P38073	919 aa		2.7	□□□□□ -1.98
KRE33	YNL132W	RSP5	P39940	809 aa	Known RBP	2.7	□□□□□ -1.98
KRE33	YNL132W	IRR1	P40541	1150 aa		2.7	□□□□□ -1.98
KRE33	YNL132W	PMT3	P47190	753 aa		2.7	□□□□□ -1.98
KRE33	YNL132W	SAM37	P50110	327 aa		2.7	□□□□□ -1.98
KRE33	YNL132W	YGR125W	P53273	1036 aa		2.7	□□□□□ -1.98
KRE33	YNL132W	YNL247W	P53852	767 aa	Known RBP	2.7	□□□□□ -1.98
KRE33	YNL132W	NCS2	P53923	493 aa	Predicted RBP	2.7	□□□□□ -1.98
KRE33	YNL132W	PUS5	Q06244	254 aa		2.7	□□□□□ -1.98
KRE33	YNL132W	PSK1	P31374	1356 aa		2.7	□□□□□ -1.98
KRE33	YNL132W	CLN1	P20437	546 aa		2.7	□□□□□ -1.98
KRE33	YNL132W	PHO84	P25297	587 aa	Known RBP	2.7	□□□□□ -1.98
KRE33	YNL132W	TFC4	P33339	1025 aa		2.7	□□□□□ -1.98
KRE33	YNL132W	ATG19	P35193	415 aa		2.7	□□□□□ -1.98
KRE33	YNL132W	MNR2	P35724	969 aa		2.7	□□□□□ -1.98
KRE33	YNL132W	SRP72	P38688	640 aa	Known RBP	2.7	□□□□□ -1.98
KRE33	YNL132W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	2.7	□□□□□ -1.98	RIP-Chip
KRE33	YNL132W	YIL166C	P40445	542 aa		2.7	□□□□□ -1.98
KRE33	YNL132W	IML2	P47031	731 aa		2.7	□□□□□ -1.98
KRE33	YNL132W	EAF6	P47128	113 aa		2.7	□□□□□ -1.98
KRE33	YNL132W	SPO1	P53541	631 aa		2.7	□□□□□ -1.98
KRE33	YNL132W	TGL2	P54857	326 aa		2.7	□□□□□ -1.98
KRE33	YNL132W	PNG1	Q02890	363 aa		2.7	□□□□□ -1.98
KRE33	YNL132W	YDR090C	Q03193	310 aa		2.7	□□□□□ -1.98
KRE33	YNL132W	GGA1	Q06336	557 aa		2.7	□□□□□ -1.98
KRE33	YNL132W	YOL036W	Q08206	761 aa		2.7	□□□□□ -1.98
KRE33	YNL132W	DPH6	Q12429	685 aa		2.7	□□□□□ -1.98
KRE33	YNL132W	KAR2	P16474	682 aa	Known RBP	2.69	□□□□□ -1.98
KRE33	YNL132W	APA1	P16550	321 aa	Known RBP	2.69	□□□□□ -1.98
KRE33	YNL132W	MCM3	P24279	971 aa	Known RBP	2.69	□□□□□ -1.98
KRE33	YNL132W	SIS1	P25294	352 aa	Known RBP	2.69	□□□□□ -1.98
KRE33	YNL132W	TRZ1	P36159	838 aa	Predicted RBP	2.69	□□□□□ -1.98
KRE33	YNL132W	YHR020W	P38708	688 aa	Known RBP	2.69	□□□□□ -1.98
KRE33	YNL132W	YER034W	P40022	185 aa	Known RBP	2.69	□□□□□ -1.98
KRE33	YNL132W	HUL4	P40985	892 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	YPP1	P46951	817 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	TCB2	P48231	1178 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	COG6	P53959	839 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	SSP2	Q08646	371 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	HMI1	Q12039	706 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	SMC6	Q12749	1114 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	DCD1	P06773	312 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	PTP2	P29461	750 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	SMY1	P32364	656 aa	Known RBP	2.69	□□□□□ -1.98
KRE33	YNL132W	CNS1	P33313	385 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	2.69	□□□□□ -1.98	not detected
KRE33	YNL132W	NOP4	P37838	685 aa	Known RBP	2.69	□□□□□ -1.98
KRE33	YNL132W	UBS1	P38290	277 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	RRF1	P38771	230 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	RTT105	P40063	208 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	YJL055W	P47044	245 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	FAA4	P47912	694 aa	Known RBP	2.69	□□□□□ -1.98
KRE33	YNL132W	SHE10	P53075	577 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	FPK1	P53739	893 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	RAT1	Q02792	1006 aa	Known RBP	2.69	□□□□□ -1.98
KRE33	YNL132W	CAB1	Q04430	367 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	GAD1	Q04792	585 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	ATG38	Q05789	226 aa	Known RBP	2.69	□□□□□ -1.98
KRE33	YNL132W	SGD1	Q06132	899 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	YDL073W	Q07454	984 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	GYP1	Q08484	637 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	RRG1	Q12167	365 aa	Predicted RBP	2.69	□□□□□ -1.98
KRE33	YNL132W	OSH2	Q12451	1283 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	NPR1	P22211	790 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	DBF20	P32328	564 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	SPC110	P32380	944 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	RIB7	P33312	244 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	YBR071W	P38243	211 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	ETP1	P38748	585 aa	Known RBP	2.69	□□□□□ -1.98
KRE33	YNL132W	YHL008C	P38750	627 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	JEM1	P40358	645 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	CCT8	P47079	568 aa	Known RBP	2.69	□□□□□ -1.98
KRE33	YNL132W	SGM1	P47166	707 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	TAN1	P53072	289 aa	Predicted RBP	2.69	□□□□□ -1.98
KRE33	YNL132W	YGR122W	P53272	402 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	HST2	P53686	357 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	ALF1	P53904	254 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	SEC5	P89102	971 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	PTA1	Q01329	785 aa	Predicted RBP	2.69	□□□□□ -1.98
KRE33	YNL132W	UME1	Q03010	460 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	HSH49	Q99181	213 aa	Predicted RBP	2.69	□□□□□ -1.98
KRE33	YNL132W	FKS3	Q04952	1785 aa		2.69	□□□□□ -1.98
KRE33	YNL132W	HOM2	P13663	365 aa	Known RBP	2.68	□□□□□ -1.98
KRE33	YNL132W	RDS2	P19541	446 aa	Known RBP	2.68	□□□□□ -1.98
KRE33	YNL132W	DIT1	P21623	536 aa		2.68	□□□□□ -1.98
KRE33	YNL132W	SDH2	P21801	266 aa		2.68	□□□□□ -1.98
KRE33	YNL132W	MRPL25	P23369	157 aa		2.68	□□□□□ -1.98
KRE33	YNL132W	KDX1	P36005	433 aa		2.68	□□□□□ -1.98
KRE33	YNL132W	TAF5	P38129	798 aa		2.68	□□□□□ -1.98
KRE33	YNL132W	SAP155	P43612	1002 aa		2.68	□□□□□ -1.98
KRE33	YNL132W	FYV8	P46949	817 aa	Known RBP	2.68	□□□□□ -1.98
KRE33	YNL132W	DUS1	P53759	423 aa	Known RBP	2.68	□□□□□ -1.98
KRE33	YNL132W	SQS1	P53866	767 aa	Known RBP	2.68	□□□□□ -1.98
KRE33	YNL132W	VPS30	Q02948	557 aa		2.68	□□□□□ -1.98
KRE33	YNL132W	HEH2	Q03281	663 aa		2.68	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 853.6 ms