RNA–Protein interactions for RNA: YMR107W

SPG4, Transcript of Protein required for high temperature survival during stationary phase, yeastyeast

Gene SPG4, Length 348 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPG4YMR107W SPO19Q03029 223 aa5.83□□□□□ -1.48
SPG4YMR107W NDL1Q06568 189 aa5.83□□□□□ -1.48
SPG4YMR107W PTC5Q12511 572 aa5.83□□□□□ -1.48
SPG4YMR107W MCM3P24279 971 aaKnown RBP5.82□□□□□ -1.48
SPG4YMR107W PEP3P27801 918 aa5.82□□□□□ -1.48
SPG4YMR107W NFU1P32860 256 aa5.82□□□□□ -1.48
SPG4YMR107W LAS1P36146 502 aaPredicted RBP5.82□□□□□ -1.48
SPG4YMR107W TDA3P38758 523 aa5.82□□□□□ -1.48
SPG4YMR107W AIP1P46680 615 aaKnown RBP5.82□□□□□ -1.48
SPG4YMR107W TMA22P47089 198 aaPredicted RBP5.82□□□□□ -1.48
SPG4YMR107W ISM1P48526 1002 aa5.82□□□□□ -1.48
SPG4YMR107W YKE2P52553 114 aa5.82□□□□□ -1.48
SPG4YMR107W SUB1P54000 292 aaKnown RBP5.82□□□□□ -1.48
SPG4YMR107W NOB1Q08444 459 aaKnown RBP5.82□□□□□ -1.48
SPG4YMR107W RUD3Q12234 484 aaKnown RBP5.82□□□□□ -1.48
SPG4YMR107W SMC6Q12749 1114 aa5.82□□□□□ -1.48
SPG4YMR107W ARG4P04076 463 aaPredicted RBP5.81□□□□□ -1.48
SPG4YMR107W PPR1P07272 904 aaPredicted RBP5.81□□□□□ -1.48
SPG4YMR107W KAR3P17119 729 aa5.81□□□□□ -1.48
SPG4YMR107W OPI1P21957 404 aa5.81□□□□□ -1.48
SPG4YMR107W YCR051WP25631 222 aa5.81□□□□□ -1.48
SPG4YMR107W PSO2P30620 661 aa5.81□□□□□ -1.48
SPG4YMR107W RPC82P32349 654 aa5.81□□□□□ -1.48
SPG4YMR107W SLA1P32790 1244 aa5.81□□□□□ -1.48
SPG4YMR107W NPL4P33755 580 aa5.81□□□□□ -1.48
SPG4YMR107W BCD1P38772 366 aa5.81□□□□□ -1.48
SPG4YMR107W SSF1P38789 453 aaPredicted RBP5.81□□□□□ -1.48
SPG4YMR107W BEM4P39011 633 aa5.81□□□□□ -1.48
SPG4YMR107W EPL1P43572 832 aa5.81□□□□□ -1.48
SPG4YMR107W ORM1P53224 222 aa5.81□□□□□ -1.48
SPG4YMR107W RPT6Q01939 405 aaKnown RBP5.81□□□□□ -1.48
SPG4YMR107W NSE3Q05541 303 aa5.81□□□□□ -1.48
SPG4YMR107W BUD20Q08004 166 aaPredicted RBP5.81□□□□□ -1.48
SPG4YMR107W GYP1Q08484 637 aa5.81□□□□□ -1.48
SPG4YMR107W YOL098CQ12496 1037 aa5.81□□□□□ -1.48
SPG4YMR107W SCJ1P25303 377 aa5.8□□□□□ -1.48
SPG4YMR107W CBF5P33322 483 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
SPG4YMR107W UGA2P38067 497 aa5.8□□□□□ -1.48
SPG4YMR107W MIP6P38760 659 aaKnown RBP5.8□□□□□ -1.48
SPG4YMR107W CTM1P38818 585 aa5.8□□□□□ -1.48
SPG4YMR107W ILM1P47155 203 aa5.8□□□□□ -1.48
SPG4YMR107W LSC2P53312 427 aa5.8□□□□□ -1.48
SPG4YMR107W USA1Q03714 838 aa5.8□□□□□ -1.48
SPG4YMR107W VTI1Q04338 217 aa5.8□□□□□ -1.48
SPG4YMR107W TMA64Q04600 565 aaKnown RBP5.8□□□□□ -1.48
SPG4YMR107W YLR001CQ07895 862 aa5.8□□□□□ -1.48
SPG4YMR107W NFI1Q12216 726 aa5.8□□□□□ -1.48
SPG4YMR107W SSK22P25390 1331 aaPredicted RBP5.79□□□□□ -1.48
SPG4YMR107W ADE3P07245 946 aaKnown RBP5.79□□□□□ -1.48
SPG4YMR107W TUP1P16649 713 aa5.79□□□□□ -1.48
SPG4YMR107W CKI1P20485 582 aa5.79□□□□□ -1.48
SPG4YMR107W ADE2P21264 571 aaKnown RBP5.79□□□□□ -1.48
SPG4YMR107W BUD14P27637 709 aa5.79□□□□□ -1.48
SPG4YMR107W BMH1P29311 267 aaKnown RBP5.79□□□□□ -1.48
SPG4YMR107W MLS1P30952 554 aa5.79□□□□□ -1.48
SPG4YMR107W SEC8P32855 1065 aa5.79□□□□□ -1.48
SPG4YMR107W NUP133P36161 1157 aa5.79□□□□□ -1.48
SPG4YMR107W YBR062CP38239 180 aa5.79□□□□□ -1.48
SPG4YMR107W PPX1P38698 397 aa5.79□□□□□ -1.48
SPG4YMR107W SET5P38890 526 aaKnown RBP5.79□□□□□ -1.48
SPG4YMR107W RTS1P38903 757 aa5.79□□□□□ -1.48
SPG4YMR107W VFA1P40080 203 aa5.79□□□□□ -1.48
SPG4YMR107W YIL001WP40560 513 aa5.79□□□□□ -1.48
SPG4YMR107W BUD6P41697 788 aa5.79□□□□□ -1.48
SPG4YMR107W YNR021WP53723 404 aaKnown RBP5.79□□□□□ -1.48
SPG4YMR107W MFM1Q02783 413 aa5.79□□□□□ -1.48
SPG4YMR107W FAR8Q05040 523 aa5.79□□□□□ -1.48
SPG4YMR107W PIG1Q06216 648 aa5.79□□□□□ -1.48
SPG4YMR107W RGA2Q06407 1009 aa5.79□□□□□ -1.48
SPG4YMR107W NCB2Q92317 146 aa5.79□□□□□ -1.48
SPG4YMR107W HXK1P04806 485 aaKnown RBP5.78□□□□□ -1.48
SPG4YMR107W SUP35P05453 685 aaKnown RBP5.78□□□□□ -1.48
SPG4YMR107W MTF2P10849 440 aa5.78□□□□□ -1.48
SPG4YMR107W VAN1P23642 535 aa5.78□□□□□ -1.48
SPG4YMR107W SWI4P25302 1093 aaKnown RBP5.78□□□□□ -1.48
SPG4YMR107W RME1P32338 300 aaKnown RBP5.78□□□□□ -1.48
SPG4YMR107W GLC3P32775 704 aa5.78□□□□□ -1.48
SPG4YMR107W RAD5P32849 1169 aaPredicted RBP5.78□□□□□ -1.48
SPG4YMR107W OAF3P36023 863 aa5.78□□□□□ -1.48
SPG4YMR107W ECM4P36156 370 aa5.78□□□□□ -1.48
SPG4YMR107W LYS14P40971 790 aa5.78□□□□□ -1.48
SPG4YMR107W YNL320WP42840 284 aa5.78□□□□□ -1.48
SPG4YMR107W YNL040WP53960 456 aaPredicted RBP5.78□□□□□ -1.48
SPG4YMR107W BET4Q00618 327 aa5.78□□□□□ -1.48
SPG4YMR107W UBP16Q02863 499 aa5.78□□□□□ -1.48
SPG4YMR107W YML119WQ03208 357 aa5.78□□□□□ -1.48
SPG4YMR107W VPS16Q03308 798 aa5.78□□□□□ -1.48
SPG4YMR107W EBS1Q03466 884 aaKnown RBP5.78□□□□□ -1.48
SPG4YMR107W SPC24Q04477 213 aa5.78□□□□□ -1.48
SPG4YMR107W GFD1Q04839 188 aaKnown RBP5.78□□□□□ -1.48
SPG4YMR107W EIS1Q05050 843 aaKnown RBP5.78□□□□□ -1.48
SPG4YMR107W INP54Q08227 384 aaKnown RBP5.78□□□□□ -1.48
SPG4YMR107W APL5Q08951 932 aaKnown RBP5.78□□□□□ -1.48
SPG4YMR107W GNT1Q12096 491 aa5.78□□□□□ -1.48
SPG4YMR107W OCA6Q12454 224 aa5.78□□□□□ -1.48
SPG4YMR107W FKS3Q04952 1785 aa5.78□□□□□ -1.48
SPG4YMR107W PRT1P06103 763 aaKnown RBP5.77□□□□□ -1.49
SPG4YMR107W GCD2P12754 651 aaPredicted RBP5.77□□□□□ -1.49
SPG4YMR107W BAS1P22035 811 aa5.77□□□□□ -1.49
SPG4YMR107W CLB4P24871 460 aa5.77□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 32.9 ms