RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W ILV1P00927 576 aaKnown RBP11.22□□□□□ -0.61
SHH4YLR164W CDC15P27636 974 aa11.22□□□□□ -0.61
SHH4YLR164W ASH1P34233 588 aa11.22□□□□□ -0.61
SHH4YLR164W MCD4P36051 919 aa11.22□□□□□ -0.61
SHH4YLR164W PET10P36139 283 aa11.22□□□□□ -0.61
SHH4YLR164W JIP4Q03361 876 aa11.22□□□□□ -0.61
SHH4YLR164W CSM3Q04659 317 aa11.22□□□□□ -0.61
SHH4YLR164W CFT2Q12102 859 aaPredicted RBP11.22□□□□□ -0.61
SHH4YLR164W YEL076C-AP0CX16 216 aa11.21□□□□□ -0.61
SHH4YLR164W YLR464WP0CX17 216 aa11.21□□□□□ -0.61
SHH4YLR164W GSY1P23337 708 aa11.21□□□□□ -0.61
SHH4YLR164W GSY2P27472 705 aa11.21□□□□□ -0.61
SHH4YLR164W MCR1P36060 302 aaKnown RBP11.21□□□□□ -0.61
SHH4YLR164W BSD2P38356 321 aa11.21□□□□□ -0.61
SHH4YLR164W YEL076CP39971 216 aa11.21□□□□□ -0.61
SHH4YLR164W THI6P41835 540 aa11.21□□□□□ -0.61
SHH4YLR164W RTC4P53850 401 aa11.21□□□□□ -0.61
SHH4YLR164W RBA50Q04418 439 aa11.21□□□□□ -0.61
SHH4YLR164W GUD1Q07729 489 aa11.21□□□□□ -0.61
SHH4YLR164W ETT1Q08421 412 aaKnown RBP11.21□□□□□ -0.61
SHH4YLR164W TOM1Q03280 3268 aa11.21□□□□□ -0.62
SHH4YLR164W VMA2P16140 517 aaKnown RBP11.2□□□□□ -0.62
SHH4YLR164W ESS1P22696 170 aa11.2□□□□□ -0.62
SHH4YLR164W SRO9P25567 434 aaKnown RBP11.2□□□□□ -0.62
SHH4YLR164W HIR1P32479 840 aa11.2□□□□□ -0.62
SHH4YLR164W DIP5P53388 608 aa11.2□□□□□ -0.62
SHH4YLR164W OYE2Q03558 400 aaKnown RBP11.2□□□□□ -0.62
SHH4YLR164W BUL2Q03758 920 aaKnown RBP11.2□□□□□ -0.62
SHH4YLR164W MOT2P34909 587 aaKnown RBP11.19□□□□□ -0.62
SHH4YLR164W APE3P37302 537 aaKnown RBP11.19□□□□□ -0.62
SHH4YLR164W PSY4P38193 441 aa11.19□□□□□ -0.62
SHH4YLR164W ULP2P40537 1034 aaPredicted RBP11.19□□□□□ -0.62
SHH4YLR164W MFM1Q02783 413 aa11.19□□□□□ -0.62
SHH4YLR164W LCD1Q04377 747 aa11.19□□□□□ -0.62
SHH4YLR164W CST9Q06032 482 aa11.19□□□□□ -0.62
SHH4YLR164W DUS4Q06063 367 aa11.19□□□□□ -0.62
SHH4YLR164W ERP3Q12403 225 aa11.19□□□□□ -0.62
SHH4YLR164W ISY1P21374 235 aaPredicted RBP11.18□□□□□ -0.62
SHH4YLR164W EUG1P32474 517 aa11.18□□□□□ -0.62
SHH4YLR164W SAC6P32599 642 aaKnown RBP11.18□□□□□ -0.62
SHH4YLR164W ISW1P38144 1129 aa11.18□□□□□ -0.62
SHH4YLR164W LSC2P53312 427 aa11.18□□□□□ -0.62
SHH4YLR164W CBK1P53894 756 aa11.18□□□□□ -0.62
SHH4YLR164W PTA1Q01329 785 aaPredicted RBP11.18□□□□□ -0.62
SHH4YLR164W AFT2Q08957 416 aa11.18□□□□□ -0.62
SHH4YLR164W YDR461C-AQ2V2P7 80 aa11.18□□□□□ -0.62
SHH4YLR164W CDC60P26637 1090 aaKnown RBP11.17□□□□□ -0.62
SHH4YLR164W RRM3P38766 723 aa11.17□□□□□ -0.62
SHH4YLR164W GPB2P39717 880 aa11.17□□□□□ -0.62
SHH4YLR164W NOC2P39744 710 aaKnown RBP11.17□□□□□ -0.62
SHH4YLR164W GPD2P41911 440 aaKnown RBP11.17□□□□□ -0.62
SHH4YLR164W PGA2P53903 129 aa11.17□□□□□ -0.62
SHH4YLR164W SMC6Q12749 1114 aa11.17□□□□□ -0.62
SHH4YLR164W FOB1O13329 566 aa11.16□□□□□ -0.62
SHH4YLR164W SUP45P12385 437 aaKnown RBP11.16□□□□□ -0.62
SHH4YLR164W PKC1P24583 1151 aa11.16□□□□□ -0.62
SHH4YLR164W PIH1P38768 344 aa11.16□□□□□ -0.62
SHH4YLR164W YLH47Q06493 454 aa11.16□□□□□ -0.62
SHH4YLR164W RPL22AP05749 121 aaKnown RBP11.15□□□□□ -0.62
SHH4YLR164W MIP1P15801 1254 aa11.15□□□□□ -0.62
SHH4YLR164W DBP7P36120 742 aaKnown RBP11.15□□□□□ -0.62
SHH4YLR164W MRPL10P36520 322 aa11.15□□□□□ -0.62
SHH4YLR164W VPS29P38759 282 aa11.15□□□□□ -0.62
SHH4YLR164W SCS3P53012 380 aa11.15□□□□□ -0.62
SHH4YLR164W YGR125WP53273 1036 aa11.15□□□□□ -0.62
SHH4YLR164W SLD5Q03406 294 aa11.15□□□□□ -0.62
SHH4YLR164W YMR321CQ04898 105 aa11.15□□□□□ -0.62
SHH4YLR164W ISA1Q07821 250 aaPredicted RBP11.15□□□□□ -0.62
SHH4YLR164W YOL075CQ08234 1294 aa11.15□□□□□ -0.62
SHH4YLR164W TMA16Q08687 178 aa11.15□□□□□ -0.62
SHH4YLR164W YPL216WQ08964 1102 aa11.15□□□□□ -0.62
SHH4YLR164W SES1P07284 462 aaKnown RBP11.14□□□□□ -0.63
SHH4YLR164W CKA2P19454 339 aa11.14□□□□□ -0.63
SHH4YLR164W TKL1P23254 680 aaKnown RBP11.14□□□□□ -0.63
SHH4YLR164W REG2P38232 338 aa11.14□□□□□ -0.63
SHH4YLR164W VTC2P43585 828 aa11.14□□□□□ -0.63
SHH4YLR164W YGR237CP50089 785 aa11.14□□□□□ -0.63
SHH4YLR164W GUP1P53154 560 aa11.14□□□□□ -0.63
SHH4YLR164W WAR1Q03631 944 aa11.14□□□□□ -0.63
SHH4YLR164W MCM2P29469 868 aa11.13□□□□□ -0.63
SHH4YLR164W YKR018CP36114 725 aa11.13□□□□□ -0.63
SHH4YLR164W SIP3P38717 1229 aa11.13□□□□□ -0.63
SHH4YLR164W ROG3P43602 733 aa11.13□□□□□ -0.63
SHH4YLR164W FUS2Q05670 677 aa11.13□□□□□ -0.63
SHH4YLR164W YDL057WQ07379 328 aa11.13□□□□□ -0.63
SHH4YLR164W NCR1Q12200 1170 aa11.13□□□□□ -0.63
SHH4YLR164W FKS1P38631 1876 aaKnown RBP11.12□□□□□ -0.63
SHH4YLR164W PRP22P24384 1145 aaKnown RBP11.12□□□□□ -0.63
SHH4YLR164W RAM2P29703 316 aa11.12□□□□□ -0.63
SHH4YLR164W PSO2P30620 661 aa11.12□□□□□ -0.63
SHH4YLR164W SUV3P32580 737 aa11.12□□□□□ -0.63
SHH4YLR164W SPR3P41901 512 aa11.12□□□□□ -0.63
SHH4YLR164W CDC19P00549 500 aaKnown RBP11.11□□□□□ -0.63
SHH4YLR164W PGK1P00560 416 aaKnown RBP11.11□□□□□ -0.63
SHH4YLR164W CLN3P13365 580 aa11.11□□□□□ -0.63
SHH4YLR164W YUR1P26725 428 aa11.11□□□□□ -0.63
SHH4YLR164W PGM1P33401 570 aaKnown RBP11.11□□□□□ -0.63
SHH4YLR164W PPS1P38148 807 aa11.11□□□□□ -0.63
SHH4YLR164W PHM6Q05637 104 aa11.11□□□□□ -0.63
SHH4YLR164W TLG2Q08144 397 aa11.11□□□□□ -0.63
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms