RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W RET1P22276 1149 aaKnown RBP3.39□□□□□ -1.87
RPL40AYIL148W MSH3P25336 1018 aa3.39□□□□□ -1.87
RPL40AYIL148W AIM26P32858 118 aa3.39□□□□□ -1.87
RPL40AYIL148W NEM1P38757 446 aa3.39□□□□□ -1.87
RPL40AYIL148W XKS1P42826 600 aa3.39□□□□□ -1.87
RPL40AYIL148W YLR257WQ06146 321 aaKnown RBP3.39□□□□□ -1.87
RPL40AYIL148W RTT10Q08924 1013 aa3.39□□□□□ -1.87
RPL40AYIL148W CDC34P14682 295 aa3.38□□□□□ -1.87
RPL40AYIL148W VMA4P22203 233 aaKnown RBP3.38□□□□□ -1.87
RPL40AYIL148W SRP40P32583 406 aaPredicted RBP3.38□□□□□ -1.87
RPL40AYIL148W MDL2P33311 773 aa3.38□□□□□ -1.87
RPL40AYIL148W TAT2P38967 592 aa3.38□□□□□ -1.87
RPL40AYIL148W MPT5P39016 859 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
RPL40AYIL148W YAR028WP39548 234 aa3.38□□□□□ -1.87
RPL40AYIL148W SNF7P39929 240 aaKnown RBP3.38□□□□□ -1.87
RPL40AYIL148W TOS4Q06266 489 aa3.38□□□□□ -1.87
RPL40AYIL148W FAL1Q12099 399 aaKnown RBP3.38□□□□□ -1.87
RPL40AYIL148W HSE1P38753 452 aa3.37□□□□□ -1.87
RPL40AYIL148W YJL049WP47048 450 aa3.37□□□□□ -1.87
RPL40AYIL148W SLI1P53304 468 aa3.37□□□□□ -1.87
RPL40AYIL148W NOG1Q02892 647 aaKnown RBP3.37□□□□□ -1.87
RPL40AYIL148W SPO20Q04359 397 aa3.37□□□□□ -1.87
RPL40AYIL148W LAP2Q10740 671 aa3.37□□□□□ -1.87
RPL40AYIL148W YOR131CQ12486 218 aa3.37□□□□□ -1.87
RPL40AYIL148W SCP160P06105 1222 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
RPL40AYIL148W DED1P06634 604 aaKnown RBP3.36□□□□□ -1.87
RPL40AYIL148W GCR1P07261 785 aa3.36□□□□□ -1.87
RPL40AYIL148W PIC2P40035 300 aa3.36□□□□□ -1.87
RPL40AYIL148W OSW7P43611 510 aa3.36□□□□□ -1.87
RPL40AYIL148W SPT20P50875 604 aa3.36□□□□□ -1.87
RPL40AYIL148W YGL140CP53120 1219 aa3.36□□□□□ -1.87
RPL40AYIL148W RSA3Q05942 220 aaKnown RBP3.36□□□□□ -1.87
RPL40AYIL148W FPR4Q06205 392 aaPredicted RBP3.36□□□□□ -1.87
RPL40AYIL148W YTA7P40340 1379 aa3.36□□□□□ -1.87
RPL40AYIL148W SEC23P15303 768 aaKnown RBP3.35□□□□□ -1.87
RPL40AYIL148W PRI2P20457 528 aa3.35□□□□□ -1.87
RPL40AYIL148W MEF2P39677 819 aa3.35□□□□□ -1.87
RPL40AYIL148W YJL045WP47052 634 aa3.35□□□□□ -1.87
RPL40AYIL148W ENT3P47160 408 aa3.35□□□□□ -1.87
RPL40AYIL148W EST2Q06163 884 aa3.35□□□□□ -1.87
RPL40AYIL148W TDA5Q06417 326 aaKnown RBP3.35□□□□□ -1.87
RPL40AYIL148W PUS9Q12069 462 aa3.35□□□□□ -1.87
RPL40AYIL148W YOL098CQ12496 1037 aa3.35□□□□□ -1.87
RPL40AYIL148W BAS1P22035 811 aa3.34□□□□□ -1.87
RPL40AYIL148W SRO9P25567 434 aaKnown RBP3.34□□□□□ -1.87
RPL40AYIL148W SCT1P32784 759 aa3.34□□□□□ -1.87
RPL40AYIL148W YKL091CP33324 310 aaKnown RBP3.34□□□□□ -1.87
RPL40AYIL148W ADD66P36040 267 aa3.34□□□□□ -1.87
RPL40AYIL148W LAM1P38851 1228 aa3.34□□□□□ -1.87
RPL40AYIL148W FAA4P47912 694 aaKnown RBP3.34□□□□□ -1.87
RPL40AYIL148W TYW3P53177 273 aa3.34□□□□□ -1.87
RPL40AYIL148W YNR063WP53749 607 aa3.34□□□□□ -1.87
RPL40AYIL148W SIW14P53965 281 aa3.34□□□□□ -1.87
RPL40AYIL148W UBP3Q01477 912 aaKnown RBP RIP-Chip data3.34□□□□□ -1.87not detected
RPL40AYIL148W GCN5Q03330 439 aa3.34□□□□□ -1.87
RPL40AYIL148W HRK1Q08732 759 aaKnown RBP3.34□□□□□ -1.87
RPL40AYIL148W CDC53Q12018 815 aaKnown RBP3.34□□□□□ -1.87
RPL40AYIL148W SSF2Q12153 453 aaPredicted RBP3.34□□□□□ -1.87
RPL40AYIL148W TRM2P33753 639 aa3.33□□□□□ -1.88
RPL40AYIL148W OCA5P38738 679 aa3.33□□□□□ -1.88
RPL40AYIL148W YGR053CP53234 283 aa3.33□□□□□ -1.88
RPL40AYIL148W NAN1Q02931 896 aaKnown RBP3.33□□□□□ -1.88
RPL40AYIL148W UTP5Q04177 643 aaKnown RBP3.33□□□□□ -1.88
RPL40AYIL148W SGD1Q06132 899 aa3.33□□□□□ -1.88
RPL40AYIL148W SPO75Q07798 868 aa3.33□□□□□ -1.88
RPL40AYIL148W RSC58Q07979 502 aa3.33□□□□□ -1.88
RPL40AYIL148W OPI10Q08202 246 aa3.33□□□□□ -1.88
RPL40AYIL148W OSH2Q12451 1283 aa3.33□□□□□ -1.88
RPL40AYIL148W SPS1P08458 490 aa3.32□□□□□ -1.88
RPL40AYIL148W STI1P15705 589 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
RPL40AYIL148W GRX1P25373 110 aaKnown RBP3.32□□□□□ -1.88
RPL40AYIL148W MCM7P38132 845 aa3.32□□□□□ -1.88
RPL40AYIL148W MSE1P48525 536 aa3.32□□□□□ -1.88
RPL40AYIL148W RKM2Q03942 479 aa3.32□□□□□ -1.88
RPL40AYIL148W RCL1Q08096 367 aaPredicted RBP3.32□□□□□ -1.88
RPL40AYIL148W YOR352WQ08816 343 aa3.32□□□□□ -1.88
RPL40AYIL148W CYC1P00044 109 aaPredicted RBP3.31□□□□□ -1.88
RPL40AYIL148W TRP2P00899 507 aaKnown RBP3.31□□□□□ -1.88
RPL40AYIL148W SYP1P25623 870 aaKnown RBP3.31□□□□□ -1.88
RPL40AYIL148W LYP1P32487 611 aa3.31□□□□□ -1.88
RPL40AYIL148W PPG1P32838 368 aa3.31□□□□□ -1.88
RPL40AYIL148W TIM54P47045 478 aa3.31□□□□□ -1.88
RPL40AYIL148W VPS53P47061 822 aa3.31□□□□□ -1.88
RPL40AYIL148W SUN4P53616 420 aa3.31□□□□□ -1.88
RPL40AYIL148W ORC1P54784 914 aaPredicted RBP3.31□□□□□ -1.88
RPL40AYIL148W ROD1Q02805 837 aa3.31□□□□□ -1.88
RPL40AYIL148W ROT1Q03691 256 aa3.31□□□□□ -1.88
RPL40AYIL148W MKK2P32491 506 aa3.3□□□□□ -1.88
RPL40AYIL148W YSC84P32793 468 aa3.3□□□□□ -1.88
RPL40AYIL148W PIN4P34217 668 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
RPL40AYIL148W YKL107WP34251 309 aa3.3□□□□□ -1.88
RPL40AYIL148W RER2P35196 286 aa3.3□□□□□ -1.88
RPL40AYIL148W MRP8P35719 219 aa3.3□□□□□ -1.88
RPL40AYIL148W RDH54P38086 958 aa3.3□□□□□ -1.88
RPL40AYIL148W TPO2P53283 614 aa3.3□□□□□ -1.88
RPL40AYIL148W YML122CQ03207 126 aa3.3□□□□□ -1.88
RPL40AYIL148W PLB2Q03674 706 aa3.3□□□□□ -1.88
RPL40AYIL148W NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
RPL40AYIL148W DUS4Q06063 367 aa3.3□□□□□ -1.88
RPL40AYIL148W PTC5Q12511 572 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms