RNA–Protein interactions for RNA: YGR109W-A

YGR109W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YGR109W-A, Length 873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-AYGR109W-A SPO21Q12411 609 aa5.26□□□□□ -1.57
YGR109W-AYGR109W-A ETP1P38748 585 aaKnown RBP5.25□□□□□ -1.57
YGR109W-AYGR109W-A UBP5P39944 805 aa5.25□□□□□ -1.57
YGR109W-AYGR109W-A RTT10Q08924 1013 aa5.25□□□□□ -1.57
YGR109W-AYGR109W-A BAP2P38084 609 aa5.24□□□□□ -1.57
YGR109W-AYGR109W-A CCZ1P38273 704 aa5.24□□□□□ -1.57
YGR109W-AYGR109W-A RGD1P38339 666 aa5.24□□□□□ -1.57
YGR109W-AYGR109W-A RPN3P40016 523 aaKnown RBP5.24□□□□□ -1.57
YGR109W-AYGR109W-A FOL2P51601 243 aaKnown RBP5.24□□□□□ -1.57
YGR109W-AYGR109W-A NBA1Q08229 501 aaKnown RBP5.24□□□□□ -1.57
YGR109W-AYGR109W-A SNF5P18480 905 aa5.23□□□□□ -1.57
YGR109W-AYGR109W-A DBP5P20449 482 aaKnown RBP5.23□□□□□ -1.57
YGR109W-AYGR109W-A RAD27P26793 382 aa5.23□□□□□ -1.57
YGR109W-AYGR109W-A MLS1P30952 554 aa5.23□□□□□ -1.57
YGR109W-AYGR109W-A RER2P35196 286 aa5.23□□□□□ -1.57
YGR109W-AYGR109W-A CNN1P43618 361 aa5.23□□□□□ -1.57
YGR109W-AYGR109W-A MRPL22P53881 309 aa5.23□□□□□ -1.57
YGR109W-AYGR109W-A SPS1P08458 490 aa5.22□□□□□ -1.57
YGR109W-AYGR109W-A YER152CP10356 443 aa5.22□□□□□ -1.57
YGR109W-AYGR109W-A PIK1P39104 1066 aa5.22□□□□□ -1.57
YGR109W-AYGR109W-A PUF4P25339 888 aaKnown RBP RIP-Chip data5.21□□□□□ -1.58not detected
YGR109W-AYGR109W-A DUT1P33317 147 aa5.21□□□□□ -1.58
YGR109W-AYGR109W-A MPH1P40562 993 aa5.21□□□□□ -1.58
YGR109W-AYGR109W-A YFL054CP43549 646 aa5.21□□□□□ -1.58
YGR109W-AYGR109W-A RSB1Q08417 382 aa5.21□□□□□ -1.58
YGR109W-AYGR109W-A PET112P33893 541 aa5.2□□□□□ -1.58
YGR109W-AYGR109W-A TIF35Q04067 274 aaKnown RBP5.2□□□□□ -1.58
YGR109W-AYGR109W-A TMA46Q12000 345 aaKnown RBP5.2□□□□□ -1.58
YGR109W-AYGR109W-A THI80P35202 319 aa5.19□□□□□ -1.58
YGR109W-AYGR109W-A AIM3P38266 947 aaKnown RBP5.19□□□□□ -1.58
YGR109W-AYGR109W-A SEC26P41810 973 aaKnown RBP5.19□□□□□ -1.58
YGR109W-AYGR109W-A CDC34P14682 295 aa5.18□□□□□ -1.58
YGR109W-AYGR109W-A PRP6P19735 899 aaPredicted RBP5.18□□□□□ -1.58
YGR109W-AYGR109W-A ABZ1P37254 787 aaPredicted RBP5.18□□□□□ -1.58
YGR109W-AYGR109W-A MCM7P38132 845 aa5.18□□□□□ -1.58
YGR109W-AYGR109W-A HNT2P49775 206 aa5.18□□□□□ -1.58
YGR109W-AYGR109W-A SNO2P53823 222 aa5.18□□□□□ -1.58
YGR109W-AYGR109W-A EEB1Q02891 456 aa5.18□□□□□ -1.58
YGR109W-AYGR109W-A ENV11P53246 860 aa5.17□□□□□ -1.58
YGR109W-AYGR109W-A TRP2P00899 507 aaKnown RBP5.16□□□□□ -1.58
YGR109W-AYGR109W-A LYP1P32487 611 aa5.16□□□□□ -1.58
YGR109W-AYGR109W-A MNR2P35724 969 aa5.16□□□□□ -1.58
YGR109W-AYGR109W-A NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
YGR109W-AYGR109W-A MET10P39692 1035 aa5.15□□□□□ -1.59
YGR109W-AYGR109W-A MXR1P40029 184 aa5.15□□□□□ -1.59
YGR109W-AYGR109W-A RIM8P53179 542 aa5.15□□□□□ -1.59
YGR109W-AYGR109W-A YPL277CQ08989 487 aa5.15□□□□□ -1.59
YGR109W-AYGR109W-A GNT1Q12096 491 aa5.15□□□□□ -1.59
YGR109W-AYGR109W-A CYC1P00044 109 aaPredicted RBP5.14□□□□□ -1.59
YGR109W-AYGR109W-A BAS1P22035 811 aa5.14□□□□□ -1.59
YGR109W-AYGR109W-A MOT2P34909 587 aaKnown RBP5.14□□□□□ -1.59
YGR109W-AYGR109W-A RFC5P38251 354 aa5.14□□□□□ -1.59
YGR109W-AYGR109W-A TYW3P53177 273 aa5.14□□□□□ -1.59
YGR109W-AYGR109W-A SOD2P00447 233 aa5.13□□□□□ -1.59
YGR109W-AYGR109W-A RPS13P05756 151 aaKnown RBP5.13□□□□□ -1.59
YGR109W-AYGR109W-A RPL11AP0C0W9 174 aaKnown RBP5.13□□□□□ -1.59
YGR109W-AYGR109W-A INO1P11986 533 aa5.13□□□□□ -1.59
YGR109W-AYGR109W-A DBP2P24783 546 aaKnown RBP5.13□□□□□ -1.59
YGR109W-AYGR109W-A MAP1Q01662 387 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
YGR109W-AYGR109W-A RSM24Q03976 319 aa5.13□□□□□ -1.59
YGR109W-AYGR109W-A SGD1Q06132 899 aa5.13□□□□□ -1.59
YGR109W-AYGR109W-A ESC8Q08119 714 aa5.13□□□□□ -1.59
YGR109W-AYGR109W-A YOR352WQ08816 343 aa5.13□□□□□ -1.59
YGR109W-AYGR109W-A RPL11BQ3E757 174 aaPredicted RBP5.13□□□□□ -1.59
YGR109W-AYGR109W-A TOD6P34219 525 aa5.12□□□□□ -1.59
YGR109W-AYGR109W-A LAM1P38851 1228 aa5.12□□□□□ -1.59
YGR109W-AYGR109W-A YGR053CP53234 283 aa5.12□□□□□ -1.59
YGR109W-AYGR109W-A YPL066WQ12194 479 aa5.12□□□□□ -1.59
YGR109W-AYGR109W-A SVS1Q12254 260 aa5.12□□□□□ -1.59
YGR109W-AYGR109W-A UGA2P38067 497 aa5.11□□□□□ -1.59
YGR109W-AYGR109W-A PNT1P38969 423 aa5.11□□□□□ -1.59
YGR109W-AYGR109W-A TAF1P46677 1066 aa5.11□□□□□ -1.59
YGR109W-AYGR109W-A ROT1Q03691 256 aa5.11□□□□□ -1.59
YGR109W-AYGR109W-A YDR132CQ03900 495 aa5.11□□□□□ -1.59
YGR109W-AYGR109W-A YLR225CQ05948 407 aaKnown RBP5.11□□□□□ -1.59
YGR109W-AYGR109W-A SPP382Q06411 708 aaPredicted RBP5.11□□□□□ -1.59
YGR109W-AYGR109W-A ATG13Q06628 738 aa5.11□□□□□ -1.59
YGR109W-AYGR109W-A ACM1Q08981 209 aa5.11□□□□□ -1.59
YGR109W-AYGR109W-A RIB2Q12362 591 aaKnown RBP5.11□□□□□ -1.59
YGR109W-AYGR109W-A RKM4Q12504 494 aa5.11□□□□□ -1.59
YGR109W-AYGR109W-A CMP2P14747 604 aa5.1□□□□□ -1.59
YGR109W-AYGR109W-A SRM1P21827 482 aa5.1□□□□□ -1.59
YGR109W-AYGR109W-A YCR015CP25616 317 aa5.1□□□□□ -1.59
YGR109W-AYGR109W-A SLA2P33338 968 aa5.1□□□□□ -1.59
YGR109W-AYGR109W-A FLR1P38124 548 aa5.1□□□□□ -1.59
YGR109W-AYGR109W-A MEF2P39677 819 aa5.1□□□□□ -1.59
YGR109W-AYGR109W-A GEM1P39722 662 aa5.1□□□□□ -1.59
YGR109W-AYGR109W-A YGL176CP46945 554 aa5.1□□□□□ -1.59
YGR109W-AYGR109W-A FAA4P47912 694 aaKnown RBP5.1□□□□□ -1.59
YGR109W-AYGR109W-A PLB2Q03674 706 aa5.1□□□□□ -1.59
YGR109W-AYGR109W-A BI4P03879 638 aa5.09□□□□□ -1.59
YGR109W-AYGR109W-A GAL10P04397 699 aa5.09□□□□□ -1.59
YGR109W-AYGR109W-A KIN2P13186 1147 aaKnown RBP5.09□□□□□ -1.59
YGR109W-AYGR109W-A APL1P27351 700 aa5.09□□□□□ -1.59
YGR109W-AYGR109W-A YKL107WP34251 309 aa5.09□□□□□ -1.59
YGR109W-AYGR109W-A GDE1Q02979 1223 aa5.09□□□□□ -1.59
YGR109W-AYGR109W-A GCN5Q03330 439 aa5.09□□□□□ -1.59
YGR109W-AYGR109W-A SPO20Q04359 397 aa5.09□□□□□ -1.59
YGR109W-AYGR109W-A CLN2P20438 545 aa5.08□□□□□ -1.6
YGR109W-AYGR109W-A ACE2P21192 770 aa5.08□□□□□ -1.6
Retrieved 100 of 5,963 RNA–protein pairs in 48.9 ms