RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W SPO21Q12411 609 aa5.44□□□□□ -1.54
PRP18YGR006W PBY1P38254 753 aa5.43□□□□□ -1.54
PRP18YGR006W SAF1P38352 637 aa5.43□□□□□ -1.54
PRP18YGR006W AKR1P39010 764 aa5.43□□□□□ -1.54
PRP18YGR006W RPN3P40016 523 aaKnown RBP5.43□□□□□ -1.54
PRP18YGR006W MMM1P41800 426 aa5.43□□□□□ -1.54
PRP18YGR006W IOC3P43596 787 aa5.43□□□□□ -1.54
PRP18YGR006W TPP1Q03796 238 aa5.43□□□□□ -1.54
PRP18YGR006W ESC2Q06340 456 aa5.43□□□□□ -1.54
PRP18YGR006W SPO75Q07798 868 aa5.43□□□□□ -1.54
PRP18YGR006W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
PRP18YGR006W YOR059CQ08448 450 aaKnown RBP5.43□□□□□ -1.54
PRP18YGR006W PUS7Q08647 676 aaKnown RBP5.43□□□□□ -1.54
PRP18YGR006W CDC53Q12018 815 aaKnown RBP5.43□□□□□ -1.54
PRP18YGR006W RAD4P14736 754 aa5.42□□□□□ -1.54
PRP18YGR006W NAM7P30771 971 aaKnown RBP5.42□□□□□ -1.54
PRP18YGR006W CIT3P43635 486 aa5.42□□□□□ -1.54
PRP18YGR006W YJL045WP47052 634 aa5.42□□□□□ -1.54
PRP18YGR006W YPL034WQ03083 165 aa5.42□□□□□ -1.54
PRP18YGR006W SPP382Q06411 708 aaPredicted RBP5.42□□□□□ -1.54
PRP18YGR006W YOR131CQ12486 218 aa5.42□□□□□ -1.54
PRP18YGR006W SCT1P32784 759 aa5.41□□□□□ -1.54
PRP18YGR006W YKL091CP33324 310 aaKnown RBP5.41□□□□□ -1.54
PRP18YGR006W PGM1P33401 570 aaKnown RBP5.41□□□□□ -1.54
PRP18YGR006W YBR184WP38299 523 aa5.41□□□□□ -1.54
PRP18YGR006W TIM54P47045 478 aa5.41□□□□□ -1.54
PRP18YGR006W BDF2Q07442 638 aa5.41□□□□□ -1.54
PRP18YGR006W YPL066WQ12194 479 aa5.41□□□□□ -1.54
PRP18YGR006W OSH2Q12451 1283 aa5.41□□□□□ -1.54
PRP18YGR006W SBP1P10080 294 aaKnown RBP5.4□□□□□ -1.54
PRP18YGR006W YER152CP10356 443 aa5.4□□□□□ -1.54
PRP18YGR006W CHS2P14180 963 aa5.4□□□□□ -1.54
PRP18YGR006W YSC84P32793 468 aa5.4□□□□□ -1.54
PRP18YGR006W GPB2P39717 880 aa5.4□□□□□ -1.54
PRP18YGR006W OSW7P43611 510 aa5.4□□□□□ -1.54
PRP18YGR006W TNA1P53322 534 aa5.4□□□□□ -1.54
PRP18YGR006W HOS3Q02959 697 aaKnown RBP5.4□□□□□ -1.54
PRP18YGR006W NSI1Q12457 570 aa5.4□□□□□ -1.54
PRP18YGR006W COQ4O13525 335 aa5.39□□□□□ -1.55
PRP18YGR006W PRP9P19736 530 aaKnown RBP5.39□□□□□ -1.55
PRP18YGR006W MSB1P21339 1137 aaKnown RBP5.39□□□□□ -1.55
PRP18YGR006W STE5P32917 917 aa5.39□□□□□ -1.55
PRP18YGR006W WHI3P34761 661 aaKnown RBP5.39□□□□□ -1.55
PRP18YGR006W NMD3P38861 518 aaKnown RBP5.39□□□□□ -1.55
PRP18YGR006W HUL5P53119 910 aa5.39□□□□□ -1.55
PRP18YGR006W EAR1Q03212 550 aa5.39□□□□□ -1.55
PRP18YGR006W RPN4Q03465 531 aa5.39□□□□□ -1.55
PRP18YGR006W YVC1Q12324 675 aa5.39□□□□□ -1.55
PRP18YGR006W SRO9P25567 434 aaKnown RBP5.38□□□□□ -1.55
PRP18YGR006W KAE1P36132 386 aa5.38□□□□□ -1.55
PRP18YGR006W PNT1P38969 423 aa5.38□□□□□ -1.55
PRP18YGR006W ERP6P53198 216 aa5.38□□□□□ -1.55
PRP18YGR006W RCM1P53972 490 aa5.38□□□□□ -1.55
PRP18YGR006W FMP25Q08023 583 aa5.38□□□□□ -1.55
PRP18YGR006W RPL11AP0C0W9 174 aaKnown RBP5.37□□□□□ -1.55
PRP18YGR006W HSP60P19882 572 aaKnown RBP5.37□□□□□ -1.55
PRP18YGR006W RPL8BP29453 256 aaKnown RBP5.37□□□□□ -1.55
PRP18YGR006W YHL012WP38709 493 aa5.37□□□□□ -1.55
PRP18YGR006W MBP1P39678 833 aa5.37□□□□□ -1.55
PRP18YGR006W GEM1P39722 662 aa5.37□□□□□ -1.55
PRP18YGR006W SIP5P40210 489 aaKnown RBP5.37□□□□□ -1.55
PRP18YGR006W TPO2P53283 614 aa5.37□□□□□ -1.55
PRP18YGR006W FLC1Q08967 793 aa5.37□□□□□ -1.55
PRP18YGR006W YLR122CQ12312 125 aa5.37□□□□□ -1.55
PRP18YGR006W RPL11BQ3E757 174 aaPredicted RBP5.37□□□□□ -1.55
PRP18YGR006W MDL2P33311 773 aa5.36□□□□□ -1.55
PRP18YGR006W BAP2P38084 609 aa5.36□□□□□ -1.55
PRP18YGR006W CCZ1P38273 704 aa5.36□□□□□ -1.55
PRP18YGR006W GGA2P38817 585 aaKnown RBP5.36□□□□□ -1.55
PRP18YGR006W PFD1P46988 109 aa5.36□□□□□ -1.55
PRP18YGR006W YGR125WP53273 1036 aa5.36□□□□□ -1.55
PRP18YGR006W UTP8P53276 713 aaKnown RBP5.36□□□□□ -1.55
PRP18YGR006W EAF1Q06337 982 aa5.36□□□□□ -1.55
PRP18YGR006W NBA1Q08229 501 aaKnown RBP5.36□□□□□ -1.55
PRP18YGR006W THS1P04801 734 aaKnown RBP5.35□□□□□ -1.55
PRP18YGR006W SAM35P14693 329 aa5.35□□□□□ -1.55
PRP18YGR006W YHR020WP38708 688 aaKnown RBP5.35□□□□□ -1.55
PRP18YGR006W PIK1P39104 1066 aa5.35□□□□□ -1.55
PRP18YGR006W ACM1Q08981 209 aa5.35□□□□□ -1.55
PRP18YGR006W CIT1P00890 479 aa5.34□□□□□ -1.55
PRP18YGR006W SNF5P18480 905 aa5.34□□□□□ -1.55
PRP18YGR006W ARE1P25628 610 aa5.34□□□□□ -1.55
PRP18YGR006W PBP2P38151 413 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
PRP18YGR006W CHZ1P40019 153 aaPredicted RBP5.34□□□□□ -1.55
PRP18YGR006W MXR1P40029 184 aa5.34□□□□□ -1.55
PRP18YGR006W HUL4P40985 892 aa5.34□□□□□ -1.55
PRP18YGR006W OYE3P41816 400 aaPredicted RBP5.34□□□□□ -1.55
PRP18YGR006W ALR2P43553 858 aa5.34□□□□□ -1.55
PRP18YGR006W TRE1Q08919 783 aa5.34□□□□□ -1.55
PRP18YGR006W GAL11P19659 1081 aa5.33□□□□□ -1.56
PRP18YGR006W DBP2P24783 546 aaKnown RBP5.33□□□□□ -1.56
PRP18YGR006W CDC11P32458 415 aa5.33□□□□□ -1.56
PRP18YGR006W NMD2P38798 1089 aaKnown RBP5.33□□□□□ -1.56
PRP18YGR006W BUD6P41697 788 aa5.33□□□□□ -1.56
PRP18YGR006W GUS1P46655 708 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
PRP18YGR006W SRP1Q02821 542 aaKnown RBP5.33□□□□□ -1.56
PRP18YGR006W RSB1Q08417 382 aa5.33□□□□□ -1.56
PRP18YGR006W SLA2P33338 968 aa5.32□□□□□ -1.56
PRP18YGR006W PEX7P39108 375 aa5.32□□□□□ -1.56
PRP18YGR006W RSP5P39940 809 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms