RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W TRS120Q04183 1289 aa2.7□□□□□ -1.98
CUL3YGR003W AIM39Q08223 395 aa2.7□□□□□ -1.98
CUL3YGR003W MNL2Q12205 849 aa2.7□□□□□ -1.98
CUL3YGR003W SCP160P06105 1222 aaKnown RBP RIP-Chip data2.7□□□□□ -1.98not detected
CUL3YGR003W TRL1P09880 827 aaKnown RBP2.7□□□□□ -1.98
CUL3YGR003W GPB2P39717 880 aa2.7□□□□□ -1.98
CUL3YGR003W STU2P46675 888 aa2.7□□□□□ -1.98
CUL3YGR003W NOP12Q08208 459 aaKnown RBP2.7□□□□□ -1.98
CUL3YGR003W KIN2P13186 1147 aaKnown RBP2.69□□□□□ -1.98
CUL3YGR003W IOC3P43596 787 aa2.69□□□□□ -1.98
CUL3YGR003W RPL34AP87262 121 aaPredicted RBP2.69□□□□□ -1.98
CUL3YGR003W HMI1Q12039 706 aa2.69□□□□□ -1.98
CUL3YGR003W HRR25P29295 494 aaKnown RBP2.69□□□□□ -1.98
CUL3YGR003W ADD66P36040 267 aa2.69□□□□□ -1.98
CUL3YGR003W GCV2P49095 1034 aa2.69□□□□□ -1.98
CUL3YGR003W ERP5P38819 212 aa2.68□□□□□ -1.98
CUL3YGR003W PLB1P39105 664 aa2.68□□□□□ -1.98
CUL3YGR003W QRI1P43123 477 aaKnown RBP2.68□□□□□ -1.98
CUL3YGR003W KAR5Q04746 504 aa2.68□□□□□ -1.98
CUL3YGR003W HAT1Q12341 374 aa2.68□□□□□ -1.98
CUL3YGR003W SNF5P18480 905 aa2.68□□□□□ -1.98
CUL3YGR003W MDJ2P42834 146 aa2.68□□□□□ -1.98
CUL3YGR003W FRT1Q99332 602 aa2.68□□□□□ -1.98
CUL3YGR003W SIP5P40210 489 aaKnown RBP2.67□□□□□ -1.98
CUL3YGR003W YCS4Q06156 1176 aa2.67□□□□□ -1.98
CUL3YGR003W NOC3Q07896 663 aaPredicted RBP2.67□□□□□ -1.98
CUL3YGR003W RIB2Q12362 591 aaKnown RBP2.67□□□□□ -1.98
CUL3YGR003W PFK1P16861 987 aaKnown RBP2.66□□□□□ -1.98
CUL3YGR003W APL1P27351 700 aa2.66□□□□□ -1.98
CUL3YGR003W CDC3P32457 520 aaKnown RBP2.66□□□□□ -1.98
CUL3YGR003W ACF4P47129 309 aa2.66□□□□□ -1.98
CUL3YGR003W RSM26P47141 266 aa2.66□□□□□ -1.98
CUL3YGR003W RPN3P40016 523 aaKnown RBP2.66□□□□□ -1.98
CUL3YGR003W NPL3Q01560 414 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
CUL3YGR003W GPI13Q07830 1017 aa2.66□□□□□ -1.98
CUL3YGR003W YBL113CQ7M4S9 792 aa2.66□□□□□ -1.98
CUL3YGR003W ATG1P53104 897 aa2.65□□□□□ -1.98
CUL3YGR003W PTC5Q12511 572 aa2.65□□□□□ -1.98
CUL3YGR003W GRS1P38088 690 aaKnown RBP2.65□□□□□ -1.99
CUL3YGR003W MAP1Q01662 387 aaKnown RBP RIP-Chip data2.65□□□□□ -1.99not detected
CUL3YGR003W TMN2Q04562 672 aa2.65□□□□□ -1.99
CUL3YGR003W SVS1Q12254 260 aa2.65□□□□□ -1.99
CUL3YGR003W SQT1P35184 431 aa2.64□□□□□ -1.99
CUL3YGR003W SSF1P38789 453 aaPredicted RBP2.64□□□□□ -1.99
CUL3YGR003W SIZ1Q04195 904 aa2.64□□□□□ -1.99
CUL3YGR003W YER158CP40095 573 aa2.64□□□□□ -1.99
CUL3YGR003W NUT2Q06213 157 aa2.64□□□□□ -1.99
CUL3YGR003W MCH5Q08777 521 aa2.64□□□□□ -1.99
CUL3YGR003W AFG2P32794 780 aa2.63□□□□□ -1.99
CUL3YGR003W RDH54P38086 958 aa2.63□□□□□ -1.99
CUL3YGR003W SAM37P50110 327 aa2.63□□□□□ -1.99
CUL3YGR003W NDJ1Q12366 352 aa2.63□□□□□ -1.99
CUL3YGR003W PEX28P38848 579 aa2.62□□□□□ -1.99
CUL3YGR003W EST2Q06163 884 aa2.62□□□□□ -1.99
CUL3YGR003W IRC10Q08118 586 aa2.62□□□□□ -1.99
CUL3YGR003W WHI5Q12416 295 aa2.62□□□□□ -1.99
CUL3YGR003W YHL050CP38721 697 aa2.62□□□□□ -1.99
CUL3YGR003W YHR219WP38900 624 aa2.62□□□□□ -1.99
CUL3YGR003W EXG2P52911 562 aa2.62□□□□□ -1.99
CUL3YGR003W AFT2Q08957 416 aa2.62□□□□□ -1.99
CUL3YGR003W YPL260WQ08977 551 aa2.62□□□□□ -1.99
CUL3YGR003W ALG3P38179 458 aa2.61□□□□□ -1.99
CUL3YGR003W CIC1P38779 376 aaKnown RBP2.61□□□□□ -1.99
CUL3YGR003W SEN54Q02825 467 aaPredicted RBP2.61□□□□□ -1.99
CUL3YGR003W MSC2Q03455 724 aa2.61□□□□□ -1.99
CUL3YGR003W TOS4Q06266 489 aa2.61□□□□□ -1.99
CUL3YGR003W IPL1P38991 367 aa2.61□□□□□ -1.99
CUL3YGR003W YOL073CQ08232 322 aa2.61□□□□□ -1.99
CUL3YGR003W MET4P32389 672 aa2.6□□□□□ -1.99
CUL3YGR003W PEP7P32609 515 aa2.6□□□□□ -1.99
CUL3YGR003W YFL054CP43549 646 aa2.6□□□□□ -1.99
CUL3YGR003W STB4P50104 949 aa2.6□□□□□ -1.99
CUL3YGR003W YML020WQ03722 664 aa2.6□□□□□ -1.99
CUL3YGR003W UGA4P32837 571 aa2.6□□□□□ -1.99
CUL3YGR003W MET12P46151 657 aa2.6□□□□□ -1.99
CUL3YGR003W ULP1Q02724 621 aa2.6□□□□□ -1.99
CUL3YGR003W TPO1Q07824 586 aa2.6□□□□□ -1.99
CUL3YGR003W YAP7Q08182 245 aa2.6□□□□□ -1.99
CUL3YGR003W HIS5P07172 385 aa2.59□□□□□ -1.99
CUL3YGR003W KAR2P16474 682 aaKnown RBP2.59□□□□□ -1.99
CUL3YGR003W PRP40P33203 583 aaKnown RBP2.59□□□□□ -1.99
CUL3YGR003W SUL1P38359 859 aa2.59□□□□□ -1.99
CUL3YGR003W DAK2P43550 591 aa2.59□□□□□ -1.99
CUL3YGR003W YGL140CP53120 1219 aa2.59□□□□□ -1.99
CUL3YGR003W TIM44Q01852 431 aa2.59□□□□□ -1.99
CUL3YGR003W EFT1P32324 842 aaKnown RBP2.58□□□□□ -2
CUL3YGR003W POA1P38218 177 aa2.58□□□□□ -2
CUL3YGR003W MND2P40577 368 aa2.58□□□□□ -2
CUL3YGR003W YLR040CQ07988 224 aa2.58□□□□□ -2
CUL3YGR003W NOP8Q08287 484 aaPredicted RBP2.58□□□□□ -2
CUL3YGR003W ICT1Q12385 394 aa2.58□□□□□ -2
CUL3YGR003W HEM13P11353 328 aaKnown RBP2.58□□□□□ -2
CUL3YGR003W PEX2P32800 271 aa2.58□□□□□ -2
CUL3YGR003W OMS1Q06668 471 aa2.58□□□□□ -2
CUL3YGR003W ACF2Q12168 779 aa2.58□□□□□ -2
CUL3YGR003W DED1P06634 604 aaKnown RBP2.57□□□□□ -2
CUL3YGR003W HOF1Q05080 669 aa2.57□□□□□ -2
CUL3YGR003W ATG13Q06628 738 aa2.57□□□□□ -2
CUL3YGR003W ADY3Q07732 790 aa2.57□□□□□ -2
CUL3YGR003W MSC6Q08818 692 aaKnown RBP2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 74 ms