RNA–Protein interactions for RNA: YGR002C

SWC4, Transcript of Component of the Swr1p complex that incorporates Htz1p into chromatin, yeastyeast

Gene SWC4, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWC4YGR002C ESC2Q06340 456 aa4.4□□□□□ -1.7
SWC4YGR002C INO1P11986 533 aa4.39□□□□□ -1.71
SWC4YGR002C PUF4P25339 888 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
SWC4YGR002C KIP1P28742 1111 aa4.39□□□□□ -1.71
SWC4YGR002C MLS1P30952 554 aa4.39□□□□□ -1.71
SWC4YGR002C YHL012WP38709 493 aa4.39□□□□□ -1.71
SWC4YGR002C PTC7P38797 343 aa4.39□□□□□ -1.71
SWC4YGR002C GTS1P40956 396 aa4.39□□□□□ -1.71
SWC4YGR002C SSY1Q03770 852 aa4.39□□□□□ -1.71
SWC4YGR002C SPO20Q04359 397 aa4.39□□□□□ -1.71
SWC4YGR002C ABD1P32783 436 aaPredicted RBP4.38□□□□□ -1.71
SWC4YGR002C YKL069WP36088 180 aa4.38□□□□□ -1.71
SWC4YGR002C YLR225CQ05948 407 aaKnown RBP4.38□□□□□ -1.71
SWC4YGR002C OPI10Q08202 246 aa4.38□□□□□ -1.71
SWC4YGR002C WRS1Q12109 432 aaKnown RBP4.38□□□□□ -1.71
SWC4YGR002C SSF2Q12153 453 aaPredicted RBP4.38□□□□□ -1.71
SWC4YGR002C SPO21Q12411 609 aa4.38□□□□□ -1.71
SWC4YGR002C HSP78P33416 811 aa4.38□□□□□ -1.71
SWC4YGR002C POL12P38121 705 aaPredicted RBP4.38□□□□□ -1.71
SWC4YGR002C SEA4P38164 1038 aa4.38□□□□□ -1.71
SWC4YGR002C PEX7P39108 375 aa4.38□□□□□ -1.71
SWC4YGR002C AVT1P47082 602 aa4.38□□□□□ -1.71
SWC4YGR002C HNT2P49775 206 aa4.38□□□□□ -1.71
SWC4YGR002C UBP3Q01477 912 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
SWC4YGR002C RGD1P38339 666 aa4.37□□□□□ -1.71
SWC4YGR002C MPH1P40562 993 aa4.37□□□□□ -1.71
SWC4YGR002C YER152CP10356 443 aa4.36□□□□□ -1.71
SWC4YGR002C YKL107WP34251 309 aa4.36□□□□□ -1.71
SWC4YGR002C FOL2P51601 243 aaKnown RBP4.36□□□□□ -1.71
SWC4YGR002C TDA5Q06417 326 aaKnown RBP4.36□□□□□ -1.71
SWC4YGR002C YPL260WQ08977 551 aa4.36□□□□□ -1.71
SWC4YGR002C YPL066WQ12194 479 aa4.36□□□□□ -1.71
SWC4YGR002C YSC84P32793 468 aa4.35□□□□□ -1.71
SWC4YGR002C AIM26P32858 118 aa4.35□□□□□ -1.71
SWC4YGR002C MDL2P33311 773 aa4.35□□□□□ -1.71
SWC4YGR002C YGL176CP46945 554 aa4.35□□□□□ -1.71
SWC4YGR002C NBA1Q08229 501 aaKnown RBP4.35□□□□□ -1.71
SWC4YGR002C RKM4Q12504 494 aa4.35□□□□□ -1.71
SWC4YGR002C DFG16Q99234 619 aa4.35□□□□□ -1.71
SWC4YGR002C COQ4O13525 335 aa4.34□□□□□ -1.71
SWC4YGR002C SAM35P14693 329 aa4.34□□□□□ -1.71
SWC4YGR002C LRG1P35688 1017 aa4.34□□□□□ -1.71
SWC4YGR002C GRX1P25373 110 aaKnown RBP4.33□□□□□ -1.72
SWC4YGR002C AGP1P25376 633 aa4.33□□□□□ -1.72
SWC4YGR002C CCZ1P38273 704 aa4.33□□□□□ -1.72
SWC4YGR002C SPF1P39986 1215 aaKnown RBP4.33□□□□□ -1.72
SWC4YGR002C KRI1P42846 591 aaKnown RBP4.33□□□□□ -1.72
SWC4YGR002C YFL054CP43549 646 aa4.33□□□□□ -1.72
SWC4YGR002C HOS3Q02959 697 aaKnown RBP4.33□□□□□ -1.72
SWC4YGR002C SPP382Q06411 708 aaPredicted RBP4.33□□□□□ -1.72
SWC4YGR002C RSB1Q08417 382 aa4.33□□□□□ -1.72
SWC4YGR002C GNT1Q12096 491 aa4.33□□□□□ -1.72
SWC4YGR002C SRO9P25567 434 aaKnown RBP4.32□□□□□ -1.72
SWC4YGR002C SBA1P28707 216 aaKnown RBP4.32□□□□□ -1.72
SWC4YGR002C VBA5P36172 582 aa4.32□□□□□ -1.72
SWC4YGR002C NNF1P47149 201 aa4.32□□□□□ -1.72
SWC4YGR002C ECL1P48235 211 aa4.32□□□□□ -1.72
SWC4YGR002C TNA1P53322 534 aa4.32□□□□□ -1.72
SWC4YGR002C LPX1Q12405 387 aaKnown RBP4.32□□□□□ -1.72
SWC4YGR002C SEG2P34250 1132 aa4.31□□□□□ -1.72
SWC4YGR002C MBP1P39678 833 aa4.31□□□□□ -1.72
SWC4YGR002C MXR1P40029 184 aa4.31□□□□□ -1.72
SWC4YGR002C RCL1Q08096 367 aaPredicted RBP4.31□□□□□ -1.72
SWC4YGR002C RPL11AP0C0W9 174 aaKnown RBP4.3□□□□□ -1.72
SWC4YGR002C PIN4P34217 668 aaKnown RBP RIP-Chip data4.3□□□□□ -1.72not detected
SWC4YGR002C ETP1P38748 585 aaKnown RBP4.3□□□□□ -1.72
SWC4YGR002C RPN3P40016 523 aaKnown RBP4.3□□□□□ -1.72
SWC4YGR002C SIP5P40210 489 aaKnown RBP4.3□□□□□ -1.72
SWC4YGR002C IRC24P40580 263 aa4.3□□□□□ -1.72
SWC4YGR002C NAN1Q02931 896 aaKnown RBP4.3□□□□□ -1.72
SWC4YGR002C RSC58Q07979 502 aa4.3□□□□□ -1.72
SWC4YGR002C RPL11BQ3E757 174 aaPredicted RBP4.3□□□□□ -1.72
SWC4YGR002C SPS1P08458 490 aa4.29□□□□□ -1.72
SWC4YGR002C RAD4P14736 754 aa4.29□□□□□ -1.72
SWC4YGR002C SNF5P18480 905 aa4.29□□□□□ -1.72
SWC4YGR002C GAS1P22146 559 aaKnown RBP4.29□□□□□ -1.72
SWC4YGR002C DBP2P24783 546 aaKnown RBP4.29□□□□□ -1.72
SWC4YGR002C STE5P32917 917 aa4.29□□□□□ -1.72
SWC4YGR002C YBR184WP38299 523 aa4.29□□□□□ -1.72
SWC4YGR002C SNF7P39929 240 aaKnown RBP4.29□□□□□ -1.72
SWC4YGR002C SHE9Q04172 456 aa4.29□□□□□ -1.72
SWC4YGR002C GLT1Q12680 2145 aaKnown RBP4.29□□□□□ -1.72
SWC4YGR002C MRP8P35719 219 aa4.29□□□□□ -1.72
SWC4YGR002C OCA5P38738 679 aa4.29□□□□□ -1.72
SWC4YGR002C TAT2P38967 592 aa4.29□□□□□ -1.72
SWC4YGR002C PNT1P38969 423 aa4.29□□□□□ -1.72
SWC4YGR002C TIM54P47045 478 aa4.29□□□□□ -1.72
SWC4YGR002C PRP43P53131 767 aaKnown RBP4.29□□□□□ -1.72
SWC4YGR002C ORC3P54790 616 aa4.29□□□□□ -1.72
SWC4YGR002C RNQ1P25367 405 aa4.28□□□□□ -1.72
SWC4YGR002C UGA2P38067 497 aa4.28□□□□□ -1.72
SWC4YGR002C BAP2P38084 609 aa4.28□□□□□ -1.72
SWC4YGR002C PIK1P39104 1066 aa4.28□□□□□ -1.72
SWC4YGR002C YJL049WP47048 450 aa4.28□□□□□ -1.72
SWC4YGR002C YOR352WQ08816 343 aa4.28□□□□□ -1.72
SWC4YGR002C YOL098CQ12496 1037 aa4.28□□□□□ -1.72
SWC4YGR002C PBY1P38254 753 aa4.27□□□□□ -1.73
SWC4YGR002C IRR1P40541 1150 aa4.27□□□□□ -1.73
SWC4YGR002C IOC3P43596 787 aa4.27□□□□□ -1.73
SWC4YGR002C ACM1Q08981 209 aa4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms