RNA–Protein interactions for RNA: YDR545W

YRF1-1, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-1, Length 5,391 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-1YDR545W URH1Q04179 340 aa8.29□□□□□ -1.08
YRF1-1YDR545W GFA1P14742 717 aaKnown RBP8.28□□□□□ -1.08
YRF1-1YDR545W HEM3P28789 327 aa8.28□□□□□ -1.08
YRF1-1YDR545W SSK22P25390 1331 aaPredicted RBP8.28□□□□□ -1.08
YRF1-1YDR545W ETP1P38748 585 aaKnown RBP8.28□□□□□ -1.08
YRF1-1YDR545W YRB1P41920 201 aaKnown RBP8.28□□□□□ -1.08
YRF1-1YDR545W IST1P53843 298 aaPredicted RBP8.28□□□□□ -1.08
YRF1-1YDR545W ALR1Q08269 859 aa8.28□□□□□ -1.08
YRF1-1YDR545W PTA1Q01329 785 aaPredicted RBP8.28□□□□□ -1.08
YRF1-1YDR545W UTP14Q04500 899 aaKnown RBP8.28□□□□□ -1.08
YRF1-1YDR545W NOB1Q08444 459 aaKnown RBP8.28□□□□□ -1.08
YRF1-1YDR545W ARG4P04076 463 aaPredicted RBP8.28□□□□□ -1.08
YRF1-1YDR545W SIN4P32259 974 aa8.28□□□□□ -1.08
YRF1-1YDR545W YGR237CP50089 785 aa8.28□□□□□ -1.08
YRF1-1YDR545W LSG1P53145 640 aaKnown RBP8.28□□□□□ -1.08
YRF1-1YDR545W EBS1Q03466 884 aaKnown RBP8.28□□□□□ -1.08
YRF1-1YDR545W SOV1Q04748 898 aa8.28□□□□□ -1.08
YRF1-1YDR545W DAL7P21826 554 aa8.27□□□□□ -1.08
YRF1-1YDR545W PDC6P26263 563 aaKnown RBP8.27□□□□□ -1.08
YRF1-1YDR545W KAR9P32526 644 aa8.27□□□□□ -1.08
YRF1-1YDR545W PIH1P38768 344 aa8.27□□□□□ -1.08
YRF1-1YDR545W PET100P38958 111 aa8.27□□□□□ -1.08
YRF1-1YDR545W TIF4632P39936 914 aaKnown RBP8.27□□□□□ -1.08
YRF1-1YDR545W MCM6P53091 1017 aaKnown RBP8.27□□□□□ -1.08
YRF1-1YDR545W TOF1P53840 1238 aa8.27□□□□□ -1.08
YRF1-1YDR545W YLR407WQ06070 228 aa8.27□□□□□ -1.08
YRF1-1YDR545W SAC3P46674 1301 aa8.27□□□□□ -1.09
YRF1-1YDR545W NAT1P12945 854 aaKnown RBP8.27□□□□□ -1.09
YRF1-1YDR545W RAD57P25301 460 aa8.27□□□□□ -1.09
YRF1-1YDR545W MIP6P38760 659 aaKnown RBP8.27□□□□□ -1.09
YRF1-1YDR545W HFM1P51979 1187 aa8.27□□□□□ -1.09
YRF1-1YDR545W MPC54Q08550 464 aa8.27□□□□□ -1.09
YRF1-1YDR545W OCA6Q12454 224 aa8.27□□□□□ -1.09
YRF1-1YDR545W HIS4P00815 799 aaKnown RBP8.27□□□□□ -1.09
YRF1-1YDR545W SPO16P17122 198 aa8.27□□□□□ -1.09
YRF1-1YDR545W GPD2P41911 440 aaKnown RBP8.27□□□□□ -1.09
YRF1-1YDR545W VTC2P43585 828 aa8.27□□□□□ -1.09
YRF1-1YDR545W SPO75Q07798 868 aa8.27□□□□□ -1.09
YRF1-1YDR545W SAP185P40856 1058 aa8.26□□□□□ -1.09
YRF1-1YDR545W CBP3P21560 335 aa8.26□□□□□ -1.09
YRF1-1YDR545W PAP1P29468 568 aaKnown RBP8.26□□□□□ -1.09
YRF1-1YDR545W PYC2P32327 1180 aaKnown RBP8.26□□□□□ -1.09
YRF1-1YDR545W BMH2P34730 273 aaKnown RBP8.26□□□□□ -1.09
YRF1-1YDR545W SHE4P51534 789 aa8.26□□□□□ -1.09
YRF1-1YDR545W GDE1Q02979 1223 aa8.26□□□□□ -1.09
YRF1-1YDR545W NOC3Q07896 663 aaPredicted RBP8.26□□□□□ -1.09
YRF1-1YDR545W APL1P27351 700 aa8.26□□□□□ -1.09
YRF1-1YDR545W EFM4P40516 257 aa8.26□□□□□ -1.09
YRF1-1YDR545W ARR1Q06596 294 aa8.26□□□□□ -1.09
YRF1-1YDR545W BDF2Q07442 638 aa8.26□□□□□ -1.09
YRF1-1YDR545W VMA4P22203 233 aaKnown RBP8.26□□□□□ -1.09
YRF1-1YDR545W TDA3P38758 523 aa8.26□□□□□ -1.09
YRF1-1YDR545W VMA10P48836 114 aaKnown RBP8.26□□□□□ -1.09
YRF1-1YDR545W RIX7Q07844 837 aaKnown RBP8.26□□□□□ -1.09
YRF1-1YDR545W KRE28Q04431 385 aa8.25□□□□□ -1.09
YRF1-1YDR545W GET3Q12154 354 aaKnown RBP8.25□□□□□ -1.09
YRF1-1YDR545W CDC48P25694 835 aaKnown RBP8.25□□□□□ -1.09
YRF1-1YDR545W MDR1P53258 950 aa8.25□□□□□ -1.09
YRF1-1YDR545W YOR389WQ08912 624 aa8.25□□□□□ -1.09
YRF1-1YDR545W EFB1P32471 206 aaKnown RBP8.25□□□□□ -1.09
YRF1-1YDR545W SAK1P38990 1142 aa8.25□□□□□ -1.09
YRF1-1YDR545W CUE3P53137 624 aaKnown RBP8.25□□□□□ -1.09
YRF1-1YDR545W TIP41Q12199 356 aa8.25□□□□□ -1.09
YRF1-1YDR545W NAM7P30771 971 aaKnown RBP8.25□□□□□ -1.09
YRF1-1YDR545W COS6P53344 381 aa8.25□□□□□ -1.09
YRF1-1YDR545W YDR341CQ05506 607 aaKnown RBP8.25□□□□□ -1.09
YRF1-1YDR545W VIK1Q12045 647 aa8.25□□□□□ -1.09
YRF1-1YDR545W AKR1P39010 764 aa8.25□□□□□ -1.09
YRF1-1YDR545W IES1P43579 692 aa8.25□□□□□ -1.09
YRF1-1YDR545W TMA22P47089 198 aaPredicted RBP8.25□□□□□ -1.09
YRF1-1YDR545W YJR039WP47107 1121 aa8.25□□□□□ -1.09
YRF1-1YDR545W INP2Q03824 705 aa8.25□□□□□ -1.09
YRF1-1YDR545W CEX1Q12453 761 aa8.25□□□□□ -1.09
YRF1-1YDR545W YMR147WP40218 223 aaKnown RBP8.24□□□□□ -1.09
YRF1-1YDR545W TY4A-JP47023 414 aa8.24□□□□□ -1.09
YRF1-1YDR545W GYP5Q12344 894 aa8.24□□□□□ -1.09
YRF1-1YDR545W SPO11P23179 398 aa8.24□□□□□ -1.09
YRF1-1YDR545W ILV6P25605 309 aaKnown RBP8.24□□□□□ -1.09
YRF1-1YDR545W RPL5P26321 297 aaKnown RBP8.24□□□□□ -1.09
YRF1-1YDR545W RSC8P43609 557 aaKnown RBP8.24□□□□□ -1.09
YRF1-1YDR545W PIB2P53191 635 aa8.24□□□□□ -1.09
YRF1-1YDR545W NEW1Q08972 1196 aaKnown RBP8.24□□□□□ -1.09
YRF1-1YDR545W TUP1P16649 713 aa8.24□□□□□ -1.09
YRF1-1YDR545W ALG2P43636 503 aa8.24□□□□□ -1.09
YRF1-1YDR545W ATG36P46983 293 aa8.24□□□□□ -1.09
YRF1-1YDR545W ALD3P54114 506 aa8.24□□□□□ -1.09
YRF1-1YDR545W ABP140Q08641 628 aaKnown RBP8.24□□□□□ -1.09
YRF1-1YDR545W VFA1P40080 203 aa8.24□□□□□ -1.09
YRF1-1YDR545W RMT2Q03305 412 aa8.24□□□□□ -1.09
YRF1-1YDR545W TAH18Q12181 623 aa8.24□□□□□ -1.09
YRF1-1YDR545W XRS2P33301 854 aa8.23□□□□□ -1.09
YRF1-1YDR545W LGE1Q02796 332 aaKnown RBP8.23□□□□□ -1.09
YRF1-1YDR545W YOR296WQ08748 1289 aa8.23□□□□□ -1.09
YRF1-1YDR545W TIF3P34167 436 aaKnown RBP8.23□□□□□ -1.09
YRF1-1YDR545W RPC25P35718 212 aa8.23□□□□□ -1.09
YRF1-1YDR545W FMS1P50264 508 aa8.23□□□□□ -1.09
YRF1-1YDR545W NAF1P53919 492 aaKnown RBP8.23□□□□□ -1.09
YRF1-1YDR545W MTC5Q03897 1148 aa8.23□□□□□ -1.09
YRF1-1YDR545W YPR078CQ06813 372 aa8.23□□□□□ -1.09
YRF1-1YDR545W SEC63P14906 663 aa8.23□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms