RNA–Protein interactions for RNA: YDR434W

GPI17, Transcript of Transmembrane protein, yeast

Gene GPI17, Length 1,605 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GPI17	YDR434W	GAS1	P22146	559 aa	Known RBP	4.1	□□□□□ -1.75
GPI17	YDR434W	PRP43	P53131	767 aa	Known RBP	4.1	□□□□□ -1.75
GPI17	YDR434W	RCL1	Q08096	367 aa	Predicted RBP	4.1	□□□□□ -1.75
GPI17	YDR434W	RSB1	Q08417	382 aa		4.1	□□□□□ -1.75
GPI17	YDR434W	TMA46	Q12000	345 aa	Known RBP	4.1	□□□□□ -1.75
GPI17	YDR434W	SPS1	P08458	490 aa		4.09	□□□□□ -1.76
GPI17	YDR434W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.76	not detected
GPI17	YDR434W	MLS1	P30952	554 aa		4.09	□□□□□ -1.76
GPI17	YDR434W	PET112	P33893	541 aa		4.09	□□□□□ -1.76
GPI17	YDR434W	RGD1	P38339	666 aa		4.09	□□□□□ -1.76
GPI17	YDR434W	UBP5	P39944	805 aa		4.09	□□□□□ -1.76
GPI17	YDR434W	RPN3	P40016	523 aa	Known RBP	4.09	□□□□□ -1.76
GPI17	YDR434W	CNN1	P43618	361 aa		4.09	□□□□□ -1.76
GPI17	YDR434W	DBP5	P20449	482 aa	Known RBP	4.08	□□□□□ -1.76
GPI17	YDR434W	RER2	P35196	286 aa		4.08	□□□□□ -1.76
GPI17	YDR434W	BAP2	P38084	609 aa		4.08	□□□□□ -1.76
GPI17	YDR434W	ETP1	P38748	585 aa	Known RBP	4.08	□□□□□ -1.76
GPI17	YDR434W	PIK1	P39104	1066 aa		4.07	□□□□□ -1.76
GPI17	YDR434W	YER152C	P10356	443 aa		4.06	□□□□□ -1.76
GPI17	YDR434W	SNF5	P18480	905 aa		4.06	□□□□□ -1.76
GPI17	YDR434W	MRPL22	P53881	309 aa		4.06	□□□□□ -1.76
GPI17	YDR434W	CDA2	Q06703	312 aa		4.06	□□□□□ -1.76
GPI17	YDR434W	MNR2	P35724	969 aa		4.06	□□□□□ -1.76
GPI17	YDR434W	MCM7	P38132	845 aa		4.06	□□□□□ -1.76
GPI17	YDR434W	HNT2	P49775	206 aa		4.06	□□□□□ -1.76
GPI17	YDR434W	ENV11	P53246	860 aa		4.06	□□□□□ -1.76
GPI17	YDR434W	TIF35	Q04067	274 aa	Known RBP	4.06	□□□□□ -1.76
GPI17	YDR434W	YDL177C	Q12257	170 aa		4.06	□□□□□ -1.76
GPI17	YDR434W	CDC34	P14682	295 aa		4.05	□□□□□ -1.76
GPI17	YDR434W	TSA1	P34760	196 aa	Known RBP	4.05	□□□□□ -1.76
GPI17	YDR434W	MPH1	P40562	993 aa		4.05	□□□□□ -1.76
GPI17	YDR434W	SEC26	P41810	973 aa	Known RBP	4.05	□□□□□ -1.76
GPI17	YDR434W	SNO2	P53823	222 aa		4.05	□□□□□ -1.76
GPI17	YDR434W	YOR352W	Q08816	343 aa		4.05	□□□□□ -1.76
GPI17	YDR434W	DUT1	P33317	147 aa		4.04	□□□□□ -1.76
GPI17	YDR434W	LYP1	P32487	611 aa		4.03	□□□□□ -1.76
GPI17	YDR434W	YFL054C	P43549	646 aa		4.03	□□□□□ -1.76
GPI17	YDR434W	TYW3	P53177	273 aa		4.03	□□□□□ -1.76
GPI17	YDR434W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.03	□□□□□ -1.76	not detected
GPI17	YDR434W	TRP2	P00899	507 aa	Known RBP	4.03	□□□□□ -1.77
GPI17	YDR434W	NAP1	P25293	417 aa	Known RBP	4.03	□□□□□ -1.77
GPI17	YDR434W	RFC5	P38251	354 aa		4.03	□□□□□ -1.77
GPI17	YDR434W	AIM3	P38266	947 aa	Known RBP	4.03	□□□□□ -1.77
GPI17	YDR434W	MET10	P39692	1035 aa		4.03	□□□□□ -1.77
GPI17	YDR434W	EEB1	Q02891	456 aa		4.03	□□□□□ -1.77
GPI17	YDR434W	GNT1	Q12096	491 aa		4.03	□□□□□ -1.77
GPI17	YDR434W	PRP6	P19735	899 aa	Predicted RBP	4.02	□□□□□ -1.77
GPI17	YDR434W	MXR1	P40029	184 aa		4.02	□□□□□ -1.77
GPI17	YDR434W	RSM24	Q03976	319 aa		4.02	□□□□□ -1.77
GPI17	YDR434W	SPP382	Q06411	708 aa	Predicted RBP	4.02	□□□□□ -1.77
GPI17	YDR434W	INO1	P11986	533 aa		4.01	□□□□□ -1.77
GPI17	YDR434W	CLN2	P20438	545 aa		4.01	□□□□□ -1.77
GPI17	YDR434W	BAS1	P22035	811 aa		4.01	□□□□□ -1.77
GPI17	YDR434W	MOT2	P34909	587 aa	Known RBP	4.01	□□□□□ -1.77
GPI17	YDR434W	MAD1	P40957	749 aa		4.01	□□□□□ -1.77
GPI17	YDR434W	SPO20	Q04359	397 aa		4.01	□□□□□ -1.77
GPI17	YDR434W	SVF1	Q05515	481 aa		4.01	□□□□□ -1.77
GPI17	YDR434W	SGD1	Q06132	899 aa		4.01	□□□□□ -1.77
GPI17	YDR434W	SVS1	Q12254	260 aa		4.01	□□□□□ -1.77
GPI17	YDR434W	CYC1	P00044	109 aa	Predicted RBP	4	□□□□□ -1.77
GPI17	YDR434W	RPL11A	P0C0W9	174 aa	Known RBP	4	□□□□□ -1.77
GPI17	YDR434W	THI80	P35202	319 aa		4	□□□□□ -1.77
GPI17	YDR434W	ABZ1	P37254	787 aa	Predicted RBP	4	□□□□□ -1.77
GPI17	YDR434W	GEM1	P39722	662 aa		4	□□□□□ -1.77
GPI17	YDR434W	RIM8	P53179	542 aa		4	□□□□□ -1.77
GPI17	YDR434W	CWC24	P53769	259 aa		4	□□□□□ -1.77
GPI17	YDR434W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4	□□□□□ -1.77	not detected
GPI17	YDR434W	GDE1	Q02979	1223 aa		4	□□□□□ -1.77
GPI17	YDR434W	YPL277C	Q08989	487 aa		4	□□□□□ -1.77
GPI17	YDR434W	RKM4	Q12504	494 aa		4	□□□□□ -1.77
GPI17	YDR434W	RPL11B	Q3E757	174 aa	Predicted RBP	4	□□□□□ -1.77
GPI17	YDR434W	SOD2	P00447	233 aa		3.99	□□□□□ -1.77
GPI17	YDR434W	RPS13	P05756	151 aa	Known RBP	3.99	□□□□□ -1.77
GPI17	YDR434W	KIN2	P13186	1147 aa	Known RBP	3.99	□□□□□ -1.77
GPI17	YDR434W	UGA2	P38067	497 aa		3.99	□□□□□ -1.77
GPI17	YDR434W	YGL176C	P46945	554 aa		3.99	□□□□□ -1.77
GPI17	YDR434W	YGR053C	P53234	283 aa		3.99	□□□□□ -1.77
GPI17	YDR434W	YLR225C	Q05948	407 aa	Known RBP	3.99	□□□□□ -1.77
GPI17	YDR434W	JIP5	Q06214	492 aa	Predicted RBP	3.99	□□□□□ -1.77
GPI17	YDR434W	ACM1	Q08981	209 aa		3.99	□□□□□ -1.77
GPI17	YDR434W	DBP2	P24783	546 aa	Known RBP	3.99	□□□□□ -1.77
GPI17	YDR434W	APL1	P27351	700 aa		3.99	□□□□□ -1.77
GPI17	YDR434W	TOD6	P34219	525 aa		3.99	□□□□□ -1.77
GPI17	YDR434W	YKL107W	P34251	309 aa		3.99	□□□□□ -1.77
GPI17	YDR434W	LAM1	P38851	1228 aa		3.99	□□□□□ -1.77
GPI17	YDR434W	PNT1	P38969	423 aa		3.99	□□□□□ -1.77
GPI17	YDR434W	SNF7	P39929	240 aa	Known RBP	3.99	□□□□□ -1.77
GPI17	YDR434W	KRI1	P42846	591 aa	Known RBP	3.99	□□□□□ -1.77
GPI17	YDR434W	FAA4	P47912	694 aa	Known RBP	3.99	□□□□□ -1.77
GPI17	YDR434W	SNU71	P53207	620 aa	Known RBP	3.99	□□□□□ -1.77
GPI17	YDR434W	ATG13	Q06628	738 aa		3.99	□□□□□ -1.77
GPI17	YDR434W	THS1	P04801	734 aa	Known RBP	3.98	□□□□□ -1.77
GPI17	YDR434W	CMP2	P14747	604 aa		3.98	□□□□□ -1.77
GPI17	YDR434W	YCR015C	P25616	317 aa		3.98	□□□□□ -1.77
GPI17	YDR434W	MEF2	P39677	819 aa		3.98	□□□□□ -1.77
GPI17	YDR434W	ROT1	Q03691	256 aa		3.98	□□□□□ -1.77
GPI17	YDR434W	SPT20	P50875	604 aa		3.97	□□□□□ -1.77
GPI17	YDR434W	VPS16	Q03308	798 aa		3.97	□□□□□ -1.77
GPI17	YDR434W	ESC8	Q08119	714 aa		3.97	□□□□□ -1.77
GPI17	YDR434W	PIN2	Q12057	282 aa		3.97	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms