RNA–Protein interactions for RNA: YDR213W

UPC2, Transcript of Sterol regulatory element binding protein, yeast

Gene UPC2, Length 2,742 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UPC2	YDR213W	YLR177W	Q06251	628 aa		4.68	□□□□□ -1.66
UPC2	YDR213W	CDC73	Q06697	393 aa		4.68	□□□□□ -1.66
UPC2	YDR213W	RPS9B	P05755	195 aa	Known RBP	4.68	□□□□□ -1.66
UPC2	YDR213W	TOM70	P07213	617 aa	Known RBP	4.68	□□□□□ -1.66
UPC2	YDR213W	VPS1	P21576	704 aa	Known RBP	4.68	□□□□□ -1.66
UPC2	YDR213W	CLB4	P24871	460 aa		4.68	□□□□□ -1.66
UPC2	YDR213W	PSO2	P30620	661 aa		4.68	□□□□□ -1.66
UPC2	YDR213W	SEC8	P32855	1065 aa		4.68	□□□□□ -1.66
UPC2	YDR213W	ECM4	P36156	370 aa		4.68	□□□□□ -1.66
UPC2	YDR213W	YSW1	P38280	609 aa		4.68	□□□□□ -1.66
UPC2	YDR213W	CCC2	P38995	1004 aa		4.68	□□□□□ -1.66
UPC2	YDR213W	SHQ1	P40486	507 aa	Predicted RBP	4.68	□□□□□ -1.66
UPC2	YDR213W	VTC2	P43585	828 aa		4.68	□□□□□ -1.66
UPC2	YDR213W	VPS53	P47061	822 aa		4.68	□□□□□ -1.66
UPC2	YDR213W	YGR237C	P50089	785 aa		4.68	□□□□□ -1.66
UPC2	YDR213W	INP52	P50942	1183 aa		4.68	□□□□□ -1.66
UPC2	YDR213W	CUS1	Q02554	436 aa	Predicted RBP	4.68	□□□□□ -1.66
UPC2	YDR213W	YPR109W	Q06104	294 aa		4.68	□□□□□ -1.66
UPC2	YDR213W	YDR306C	Q06640	478 aa		4.68	□□□□□ -1.66
UPC2	YDR213W	CWC2	Q12046	339 aa	Predicted RBP	4.68	□□□□□ -1.66
UPC2	YDR213W	MPH3	P0CE00	602 aa		4.67	□□□□□ -1.66
UPC2	YDR213W	RAD57	P25301	460 aa		4.67	□□□□□ -1.66
UPC2	YDR213W	PDC6	P26263	563 aa	Known RBP	4.67	□□□□□ -1.66
UPC2	YDR213W	PEP3	P27801	918 aa		4.67	□□□□□ -1.66
UPC2	YDR213W	YBL086C	P38177	466 aa		4.67	□□□□□ -1.66
UPC2	YDR213W	CCT2	P39076	527 aa	Known RBP	4.67	□□□□□ -1.66
UPC2	YDR213W	AIM20	P40451	204 aa		4.67	□□□□□ -1.66
UPC2	YDR213W	EFM4	P40516	257 aa		4.67	□□□□□ -1.66
UPC2	YDR213W	INA22	P40576	216 aa		4.67	□□□□□ -1.66
UPC2	YDR213W	UBP6	P43593	499 aa	Known RBP	4.67	□□□□□ -1.66
UPC2	YDR213W	RPL34A	P87262	121 aa	Predicted RBP	4.67	□□□□□ -1.66
UPC2	YDR213W	RTP1	Q12751	981 aa		4.67	□□□□□ -1.66
UPC2	YDR213W	YBR062C	P38239	180 aa		4.67	□□□□□ -1.66
UPC2	YDR213W	MCX1	P38323	520 aa	Predicted RBP	4.67	□□□□□ -1.66
UPC2	YDR213W	BUD16	P39988	312 aa		4.67	□□□□□ -1.66
UPC2	YDR213W	ERP6	P53198	216 aa		4.67	□□□□□ -1.66
UPC2	YDR213W	DUS1	P53759	423 aa	Known RBP	4.67	□□□□□ -1.66
UPC2	YDR213W	YNL144C	P53907	740 aa		4.67	□□□□□ -1.66
UPC2	YDR213W	ATP25	Q03153	612 aa		4.67	□□□□□ -1.66
UPC2	YDR213W	NGL3	Q03210	505 aa		4.67	□□□□□ -1.66
UPC2	YDR213W	ORM2	Q06144	216 aa		4.67	□□□□□ -1.66
UPC2	YDR213W	YOL075C	Q08234	1294 aa		4.67	□□□□□ -1.66
UPC2	YDR213W	YPL216W	Q08964	1102 aa		4.67	□□□□□ -1.66
UPC2	YDR213W	IOC2	Q12072	812 aa		4.67	□□□□□ -1.66
UPC2	YDR213W	RMP1	Q12530	201 aa		4.67	□□□□□ -1.66
UPC2	YDR213W	SSK22	P25390	1331 aa	Predicted RBP	4.67	□□□□□ -1.66
UPC2	YDR213W	TY1B-A	O13527	1196 aa	Known RBP	4.66	□□□□□ -1.66
UPC2	YDR213W	CDC6	P09119	513 aa		4.66	□□□□□ -1.66
UPC2	YDR213W	URA1	P28272	314 aa	Predicted RBP	4.66	□□□□□ -1.66
UPC2	YDR213W	HEM3	P28789	327 aa		4.66	□□□□□ -1.66
UPC2	YDR213W	RPT3	P33298	428 aa	Known RBP	4.66	□□□□□ -1.66
UPC2	YDR213W	MCD4	P36051	919 aa		4.66	□□□□□ -1.66
UPC2	YDR213W	OCA5	P38738	679 aa		4.66	□□□□□ -1.66
UPC2	YDR213W	RPL34B	P40525	121 aa	Known RBP	4.66	□□□□□ -1.66
UPC2	YDR213W	TIM11	P81449	96 aa	Predicted RBP	4.66	□□□□□ -1.66
UPC2	YDR213W	GTR1	Q00582	310 aa		4.66	□□□□□ -1.66
UPC2	YDR213W	URH1	Q04179	340 aa		4.66	□□□□□ -1.66
UPC2	YDR213W	TRS120	Q04183	1289 aa		4.66	□□□□□ -1.66
UPC2	YDR213W	YMR114C	Q04471	368 aa	Known RBP	4.66	□□□□□ -1.66
UPC2	YDR213W	BDF2	Q07442	638 aa		4.66	□□□□□ -1.66
UPC2	YDR213W	NUR1	Q12066	484 aa		4.66	□□□□□ -1.66
UPC2	YDR213W	DCS2	Q12123	353 aa		4.66	□□□□□ -1.66
UPC2	YDR213W	GYP5	Q12344	894 aa		4.66	□□□□□ -1.66
UPC2	YDR213W	AI4	P03878	556 aa		4.66	□□□□□ -1.66
UPC2	YDR213W	MAK16	P10962	306 aa	Predicted RBP	4.66	□□□□□ -1.66
UPC2	YDR213W	PGI1	P12709	554 aa	Known RBP	4.66	□□□□□ -1.66
UPC2	YDR213W	KAR3	P17119	729 aa		4.66	□□□□□ -1.66
UPC2	YDR213W	RPC82	P32349	654 aa		4.66	□□□□□ -1.66
UPC2	YDR213W	ERP5	P38819	212 aa		4.66	□□□□□ -1.66
UPC2	YDR213W	SNU71	P53207	620 aa	Known RBP	4.66	□□□□□ -1.66
UPC2	YDR213W	MFM1	Q02783	413 aa		4.66	□□□□□ -1.66
UPC2	YDR213W	FCP1	Q03254	732 aa		4.66	□□□□□ -1.66
UPC2	YDR213W	EBS1	Q03466	884 aa	Known RBP	4.66	□□□□□ -1.66
UPC2	YDR213W	GIR2	Q03768	265 aa	Predicted RBP	4.66	□□□□□ -1.66
UPC2	YDR213W	TAF9	Q05027	157 aa		4.66	□□□□□ -1.66
UPC2	YDR213W	MST1	P07236	462 aa		4.66	□□□□□ -1.66
UPC2	YDR213W	GFA1	P14742	717 aa	Known RBP	4.66	□□□□□ -1.66
UPC2	YDR213W	CNS1	P33313	385 aa		4.66	□□□□□ -1.66
UPC2	YDR213W	LAS1	P36146	502 aa	Predicted RBP	4.66	□□□□□ -1.66
UPC2	YDR213W	PXL1	P36166	706 aa		4.66	□□□□□ -1.66
UPC2	YDR213W	MPH1	P40562	993 aa		4.66	□□□□□ -1.66
UPC2	YDR213W	SUM1	P46676	1062 aa		4.66	□□□□□ -1.66
UPC2	YDR213W	FAR8	Q05040	523 aa		4.66	□□□□□ -1.66
UPC2	YDR213W	CSC1	Q06538	782 aa		4.66	□□□□□ -1.66
UPC2	YDR213W	IMH1	Q06704	911 aa	Known RBP	4.66	□□□□□ -1.66
UPC2	YDR213W	ALR1	Q08269	859 aa		4.66	□□□□□ -1.66
UPC2	YDR213W	CIR2	Q08822	631 aa		4.66	□□□□□ -1.66
UPC2	YDR213W	HMI1	Q12039	706 aa		4.66	□□□□□ -1.66
UPC2	YDR213W	SEC23	P15303	768 aa	Known RBP	4.65	□□□□□ -1.66
UPC2	YDR213W	MLS1	P30952	554 aa		4.65	□□□□□ -1.66
UPC2	YDR213W	OAF3	P36023	863 aa		4.65	□□□□□ -1.66
UPC2	YDR213W	DCW1	P36091	449 aa		4.65	□□□□□ -1.66
UPC2	YDR213W	PIH1	P38768	344 aa		4.65	□□□□□ -1.66
UPC2	YDR213W	CTM1	P38818	585 aa		4.65	□□□□□ -1.66
UPC2	YDR213W	TDA11	P38854	504 aa		4.65	□□□□□ -1.66
UPC2	YDR213W	RPN10	P38886	268 aa	Known RBP	4.65	□□□□□ -1.66
UPC2	YDR213W	TIF4632	P39936	914 aa	Known RBP	4.65	□□□□□ -1.66
UPC2	YDR213W	MDJ2	P42834	146 aa		4.65	□□□□□ -1.66
UPC2	YDR213W	ERF2	Q06551	359 aa		4.65	□□□□□ -1.66
UPC2	YDR213W	TSR2	Q06672	205 aa	Known RBP	4.65	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 98.6 ms