RNA–Protein interactions for RNA: YDR177W

UBC1, Transcript of Ubiquitin-conjugating enzyme, yeast

Gene UBC1, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC1	YDR177W	MTC2	P34246	357 aa		5.75	□□□□□ -1.49
UBC1	YDR177W	YBR071W	P38243	211 aa		5.75	□□□□□ -1.49
UBC1	YDR177W	NOC2	P39744	710 aa	Known RBP	5.75	□□□□□ -1.49
UBC1	YDR177W	INP51	P40559	946 aa	Known RBP	5.75	□□□□□ -1.49
UBC1	YDR177W	UTP22	P53254	1237 aa	Predicted RBP	5.75	□□□□□ -1.49
UBC1	YDR177W	LCB5	Q06147	687 aa	Known RBP	5.75	□□□□□ -1.49
UBC1	YDR177W	GNT1	Q12096	491 aa		5.75	□□□□□ -1.49
UBC1	YDR177W	ADE8	P04161	214 aa		5.74	□□□□□ -1.49
UBC1	YDR177W	CDC4	P07834	779 aa		5.74	□□□□□ -1.49
UBC1	YDR177W	HVG1	P0CE11	249 aa		5.74	□□□□□ -1.49
UBC1	YDR177W	AMS1	P22855	1083 aa		5.74	□□□□□ -1.49
UBC1	YDR177W	VBA3	P25594	458 aa		5.74	□□□□□ -1.49
UBC1	YDR177W	DLD1	P32891	587 aa		5.74	□□□□□ -1.49
UBC1	YDR177W	TYS1	P36421	394 aa	Known RBP	5.74	□□□□□ -1.49
UBC1	YDR177W	VRP1	P37370	817 aa		5.74	□□□□□ -1.49
UBC1	YDR177W	HSE1	P38753	452 aa		5.74	□□□□□ -1.49
UBC1	YDR177W	LEM3	P42838	414 aa		5.74	□□□□□ -1.49
UBC1	YDR177W	ALG2	P43636	503 aa		5.74	□□□□□ -1.49
UBC1	YDR177W	YJL181W	P46987	611 aa		5.74	□□□□□ -1.49
UBC1	YDR177W	PTK2	P47116	818 aa	Known RBP	5.74	□□□□□ -1.49
UBC1	YDR177W	YJR120W	P47157	116 aa		5.74	□□□□□ -1.49
UBC1	YDR177W	YJR124C	P47159	448 aa		5.74	□□□□□ -1.49
UBC1	YDR177W	MAL11	P53048	616 aa		5.74	□□□□□ -1.49
UBC1	YDR177W	TAN1	P53072	289 aa	Predicted RBP	5.74	□□□□□ -1.49
UBC1	YDR177W	YGR021W	P53212	290 aa		5.74	□□□□□ -1.49
UBC1	YDR177W	PAP2	P53632	584 aa	Known RBP	5.74	□□□□□ -1.49
UBC1	YDR177W	YNR040W	P53736	256 aa		5.74	□□□□□ -1.49
UBC1	YDR177W	SPO71	Q03868	1245 aa		5.74	□□□□□ -1.49
UBC1	YDR177W	UTP5	Q04177	643 aa	Known RBP	5.74	□□□□□ -1.49
UBC1	YDR177W	COG8	Q04632	607 aa		5.74	□□□□□ -1.49
UBC1	YDR177W	SPP382	Q06411	708 aa	Predicted RBP	5.74	□□□□□ -1.49
UBC1	YDR177W	IDI1	P15496	288 aa		5.73	□□□□□ -1.49
UBC1	YDR177W	HBS1	P32769	611 aa	Known RBP	5.73	□□□□□ -1.49
UBC1	YDR177W	MRS6	P32864	603 aa	Known RBP	5.73	□□□□□ -1.49
UBC1	YDR177W	PET10	P36139	283 aa		5.73	□□□□□ -1.49
UBC1	YDR177W	MRPL16	P38064	232 aa		5.73	□□□□□ -1.49
UBC1	YDR177W	SAH1	P39954	449 aa	Known RBP	5.73	□□□□□ -1.49
UBC1	YDR177W	SIT1	P39980	628 aa		5.73	□□□□□ -1.49
UBC1	YDR177W	MGS1	P40151	587 aa		5.73	□□□□□ -1.49
UBC1	YDR177W	NUP85	P46673	744 aa		5.73	□□□□□ -1.49
UBC1	YDR177W	BIO5	P53744	561 aa	Known RBP	5.73	□□□□□ -1.49
UBC1	YDR177W	RAT1	Q02792	1006 aa	Known RBP	5.73	□□□□□ -1.49
UBC1	YDR177W	SRP1	Q02821	542 aa	Known RBP	5.73	□□□□□ -1.49
UBC1	YDR177W	SOG2	Q08817	791 aa		5.73	□□□□□ -1.49
UBC1	YDR177W	YIG1	Q08956	461 aa		5.73	□□□□□ -1.49
UBC1	YDR177W	YLL054C	Q12244	843 aa		5.73	□□□□□ -1.49
UBC1	YDR177W	MEF1	P25039	761 aa		5.72	□□□□□ -1.49
UBC1	YDR177W	EUG1	P32474	517 aa		5.72	□□□□□ -1.49
UBC1	YDR177W	ASH1	P34233	588 aa		5.72	□□□□□ -1.49
UBC1	YDR177W	RIM4	P38741	713 aa		5.72	□□□□□ -1.49
UBC1	YDR177W	PAN5	P38787	379 aa		5.72	□□□□□ -1.49
UBC1	YDR177W	VPS27	P40343	622 aa	Known RBP	5.72	□□□□□ -1.49
UBC1	YDR177W	NEO1	P40527	1151 aa		5.72	□□□□□ -1.49
UBC1	YDR177W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	5.72	□□□□□ -1.49	not detected
UBC1	YDR177W	VPS53	P47061	822 aa		5.72	□□□□□ -1.49
UBC1	YDR177W	YJR098C	P47139	656 aa		5.72	□□□□□ -1.49
UBC1	YDR177W	GUP1	P53154	560 aa		5.72	□□□□□ -1.49
UBC1	YDR177W	COG6	P53959	839 aa		5.72	□□□□□ -1.49
UBC1	YDR177W	UBX4	P54730	416 aa		5.72	□□□□□ -1.49
UBC1	YDR177W	YLR001C	Q07895	862 aa		5.72	□□□□□ -1.49
UBC1	YDR177W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.5	not detected
UBC1	YDR177W	SST2	P11972	698 aa	Known RBP	5.71	□□□□□ -1.5
UBC1	YDR177W	YBR284W	P38150	797 aa		5.71	□□□□□ -1.5
UBC1	YDR177W	MPH1	P40562	993 aa		5.71	□□□□□ -1.5
UBC1	YDR177W	LSB6	P42951	607 aa		5.71	□□□□□ -1.5
UBC1	YDR177W	TY4A-J	P47023	414 aa		5.71	□□□□□ -1.5
UBC1	YDR177W	LCD1	Q04377	747 aa		5.71	□□□□□ -1.5
UBC1	YDR177W	DUS3	Q06053	668 aa	Known RBP	5.71	□□□□□ -1.5
UBC1	YDR177W	COG4	Q06096	861 aa		5.71	□□□□□ -1.5
UBC1	YDR177W	YPL066W	Q12194	479 aa		5.71	□□□□□ -1.5
UBC1	YDR177W	PTC5	Q12511	572 aa		5.71	□□□□□ -1.5
UBC1	YDR177W	TOP3	P13099	656 aa		5.7	□□□□□ -1.5
UBC1	YDR177W	MSD1	P15179	658 aa	Known RBP	5.7	□□□□□ -1.5
UBC1	YDR177W	MLS1	P30952	554 aa		5.7	□□□□□ -1.5
UBC1	YDR177W	RPN12	P32496	274 aa		5.7	□□□□□ -1.5
UBC1	YDR177W	ALG3	P38179	458 aa		5.7	□□□□□ -1.5
UBC1	YDR177W	NEM1	P38757	446 aa		5.7	□□□□□ -1.5
UBC1	YDR177W	GCV1	P48015	400 aa		5.7	□□□□□ -1.5
UBC1	YDR177W	GPG1	P53130	126 aa		5.7	□□□□□ -1.5
UBC1	YDR177W	YNR065C	P53751	1116 aa		5.7	□□□□□ -1.5
UBC1	YDR177W	UBP2	Q01476	1272 aa		5.7	□□□□□ -1.5
UBC1	YDR177W	YPL260W	Q08977	551 aa		5.7	□□□□□ -1.5
UBC1	YDR177W	SRD1	P09007	221 aa		5.69	□□□□□ -1.5
UBC1	YDR177W	TY1A-LR4	P0C2I8	440 aa	Known RBP	5.69	□□□□□ -1.5
UBC1	YDR177W	TY1A-DR6	P0CX70	440 aa		5.69	□□□□□ -1.5
UBC1	YDR177W	TY1A-ER1	P0CX71	440 aa		5.69	□□□□□ -1.5
UBC1	YDR177W	TY1A-LR2	P0CX72	440 aa		5.69	□□□□□ -1.5
UBC1	YDR177W	TY1A-PL	P0CX73	440 aa		5.69	□□□□□ -1.5
UBC1	YDR177W	TY1A-JR1	P0CX74	440 aa		5.69	□□□□□ -1.5
UBC1	YDR177W	TY1A-LR3	P0CX75	440 aa		5.69	□□□□□ -1.5
UBC1	YDR177W	TY1A-ML2	P0CX76	440 aa		5.69	□□□□□ -1.5
UBC1	YDR177W	PGI1	P12709	554 aa	Known RBP	5.69	□□□□□ -1.5
UBC1	YDR177W	AEP2	P22136	580 aa		5.69	□□□□□ -1.5
UBC1	YDR177W	RET1	P22276	1149 aa	Known RBP	5.69	□□□□□ -1.5
UBC1	YDR177W	STO1	P34160	861 aa	Known RBP	5.69	□□□□□ -1.5
UBC1	YDR177W	AMN1	P38285	549 aa	Predicted RBP	5.69	□□□□□ -1.5
UBC1	YDR177W	GPP1	P41277	250 aa	Known RBP	5.69	□□□□□ -1.5
UBC1	YDR177W	DUG1	P43616	481 aa	Known RBP	5.69	□□□□□ -1.5
UBC1	YDR177W	ESF2	P53743	316 aa	Known RBP	5.69	□□□□□ -1.5
UBC1	YDR177W	MTQ2	Q03920	221 aa	Predicted RBP	5.69	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms