RNA–Protein interactions for RNA: YDR108W

TRS85, Transcript of Component of transport protein particle (TRAPP) complex III, yeastyeast

Gene TRS85, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS85YDR108W KCC4P25389 1037 aa4.53□□□□□ -1.68
TRS85YDR108W RAD5P32849 1169 aaPredicted RBP4.53□□□□□ -1.68
TRS85YDR108W SIP3P38717 1229 aa4.53□□□□□ -1.68
TRS85YDR108W OCA5P38738 679 aa4.53□□□□□ -1.68
TRS85YDR108W SSF1P38789 453 aaPredicted RBP4.53□□□□□ -1.68
TRS85YDR108W HXT13P39924 564 aa4.53□□□□□ -1.68
TRS85YDR108W ATG3P40344 310 aa4.53□□□□□ -1.68
TRS85YDR108W RRD1P40454 393 aaKnown RBP4.53□□□□□ -1.68
TRS85YDR108W STB1P42845 420 aa4.53□□□□□ -1.68
TRS85YDR108W RBL2P48606 106 aaKnown RBP4.53□□□□□ -1.68
TRS85YDR108W LSC1P53598 329 aaKnown RBP4.53□□□□□ -1.68
TRS85YDR108W HST3P53687 447 aa4.53□□□□□ -1.68
TRS85YDR108W NCS2P53923 493 aaPredicted RBP4.53□□□□□ -1.68
TRS85YDR108W NOP15P53927 220 aaPredicted RBP4.53□□□□□ -1.68
TRS85YDR108W YOR296WQ08748 1289 aa4.53□□□□□ -1.68
TRS85YDR108W MCM16Q12262 181 aa4.53□□□□□ -1.68
TRS85YDR108W YOL098CQ12496 1037 aa4.53□□□□□ -1.68
TRS85YDR108W VAS1P07806 1104 aaKnown RBP4.53□□□□□ -1.68
TRS85YDR108W TAL1P15019 335 aaKnown RBP4.53□□□□□ -1.68
TRS85YDR108W RPO26P20435 155 aa4.53□□□□□ -1.68
TRS85YDR108W ARC19P33204 171 aaKnown RBP4.53□□□□□ -1.68
TRS85YDR108W BUD2P33314 1104 aa4.53□□□□□ -1.68
TRS85YDR108W HSP78P33416 811 aa4.53□□□□□ -1.68
TRS85YDR108W SAK1P38990 1142 aa4.53□□□□□ -1.68
TRS85YDR108W YJR115WP47152 169 aa4.53□□□□□ -1.68
TRS85YDR108W YGL242CP53066 181 aa4.53□□□□□ -1.68
TRS85YDR108W RCM1P53972 490 aa4.53□□□□□ -1.68
TRS85YDR108W NKP2Q06162 153 aa4.53□□□□□ -1.68
TRS85YDR108W NOP12Q08208 459 aaKnown RBP4.53□□□□□ -1.68
TRS85YDR108W AVO1Q08236 1176 aa4.53□□□□□ -1.68
TRS85YDR108W GNT1Q12096 491 aa4.53□□□□□ -1.68
TRS85YDR108W IME1P21190 360 aa4.52□□□□□ -1.69
TRS85YDR108W ATO2P32907 282 aa4.52□□□□□ -1.69
TRS85YDR108W PEX5P35056 612 aa4.52□□□□□ -1.69
TRS85YDR108W AMN1P38285 549 aaPredicted RBP4.52□□□□□ -1.69
TRS85YDR108W NMD3P38861 518 aaKnown RBP4.52□□□□□ -1.69
TRS85YDR108W VID27P40157 782 aa4.52□□□□□ -1.69
TRS85YDR108W TRS85P46944 698 aa4.52□□□□□ -1.69
TRS85YDR108W DAS1P47005 663 aa4.52□□□□□ -1.69
TRS85YDR108W TY4A-JP47023 414 aa4.52□□□□□ -1.69
TRS85YDR108W YJR079WP47126 109 aa4.52□□□□□ -1.69
TRS85YDR108W FMS1P50264 508 aa4.52□□□□□ -1.69
TRS85YDR108W COP1P53622 1201 aaKnown RBP4.52□□□□□ -1.69
TRS85YDR108W TAF8Q03750 510 aa4.52□□□□□ -1.69
TRS85YDR108W YDL073WQ07454 984 aa4.52□□□□□ -1.69
TRS85YDR108W HMI1Q12039 706 aa4.52□□□□□ -1.69
TRS85YDR108W RKM4Q12504 494 aa4.52□□□□□ -1.69
TRS85YDR108W HIS3P06633 220 aa4.52□□□□□ -1.69
TRS85YDR108W FRS2P15625 503 aaKnown RBP4.52□□□□□ -1.69
TRS85YDR108W HCA4P20448 770 aaKnown RBP4.52□□□□□ -1.69
TRS85YDR108W UBC1P21734 215 aaKnown RBP4.52□□□□□ -1.69
TRS85YDR108W MSM1P22438 575 aa4.52□□□□□ -1.69
TRS85YDR108W PCH2P38126 564 aa4.52□□□□□ -1.69
TRS85YDR108W TDA11P38854 504 aa4.52□□□□□ -1.69
TRS85YDR108W ARB1P40024 610 aaKnown RBP4.52□□□□□ -1.69
TRS85YDR108W MAM1P40065 302 aa4.52□□□□□ -1.69
TRS85YDR108W INA22P40576 216 aa4.52□□□□□ -1.69
TRS85YDR108W HUL4P40985 892 aa4.52□□□□□ -1.69
TRS85YDR108W HXT10P43581 546 aa4.52□□□□□ -1.69
TRS85YDR108W ECL1P48235 211 aa4.52□□□□□ -1.69
TRS85YDR108W CAF130P53280 1122 aaPredicted RBP4.52□□□□□ -1.69
TRS85YDR108W TFB2Q02939 513 aa4.52□□□□□ -1.69
TRS85YDR108W SPP382Q06411 708 aaPredicted RBP4.52□□□□□ -1.69
TRS85YDR108W BUD21Q08492 214 aaPredicted RBP4.52□□□□□ -1.69
TRS85YDR108W SLK19Q08581 821 aaKnown RBP4.52□□□□□ -1.69
TRS85YDR108W PDC1P06169 563 aaKnown RBP4.51□□□□□ -1.69
TRS85YDR108W SSC1P0CS90 654 aaKnown RBP4.51□□□□□ -1.69
TRS85YDR108W SEN2P16658 377 aa4.51□□□□□ -1.69
TRS85YDR108W DPB3P27344 201 aa4.51□□□□□ -1.69
TRS85YDR108W PAP1P29468 568 aaKnown RBP4.51□□□□□ -1.69
TRS85YDR108W ACP1P32463 125 aa4.51□□□□□ -1.69
TRS85YDR108W MPT5P39016 859 aaKnown RBP RIP-Chip data4.51□□□□□ -1.69not detected
TRS85YDR108W UBP12P39538 1254 aa4.51□□□□□ -1.69
TRS85YDR108W MRX1P40050 688 aa4.51□□□□□ -1.69
TRS85YDR108W GVP36P40531 326 aaKnown RBP4.51□□□□□ -1.69
TRS85YDR108W SGM1P47166 707 aa4.51□□□□□ -1.69
TRS85YDR108W ENP2P48234 707 aaKnown RBP4.51□□□□□ -1.69
TRS85YDR108W APT1P49435 187 aaKnown RBP4.51□□□□□ -1.69
TRS85YDR108W YKR005CQ02203 525 aa4.51□□□□□ -1.69
TRS85YDR108W TFB3Q03290 321 aa4.51□□□□□ -1.69
TRS85YDR108W CWC15Q03772 175 aaKnown RBP4.51□□□□□ -1.69
TRS85YDR108W ATG23Q06671 453 aa4.51□□□□□ -1.69
TRS85YDR108W PCL8Q08966 492 aa4.51□□□□□ -1.69
TRS85YDR108W SGT2Q12118 346 aaKnown RBP4.51□□□□□ -1.69
TRS85YDR108W ADE3P07245 946 aaKnown RBP4.5□□□□□ -1.69
TRS85YDR108W YMR085WP0CF18 432 aa4.5□□□□□ -1.69
TRS85YDR108W DIT2P21595 489 aa4.5□□□□□ -1.69
TRS85YDR108W LOS1P33418 1100 aaPredicted RBP4.5□□□□□ -1.69
TRS85YDR108W NIP100P33420 868 aa4.5□□□□□ -1.69
TRS85YDR108W TAF5P38129 798 aa4.5□□□□□ -1.69
TRS85YDR108W VPS8P39702 1274 aa4.5□□□□□ -1.69
TRS85YDR108W RTR1P40084 226 aaPredicted RBP4.5□□□□□ -1.69
TRS85YDR108W RPA14P50106 137 aa4.5□□□□□ -1.69
TRS85YDR108W OCA1P50946 238 aaPredicted RBP4.5□□□□□ -1.69
TRS85YDR108W YGR266WP53326 701 aa4.5□□□□□ -1.69
TRS85YDR108W HXT17P53631 564 aa4.5□□□□□ -1.69
TRS85YDR108W ESBP6P53918 673 aa4.5□□□□□ -1.69
TRS85YDR108W SEN54Q02825 467 aaPredicted RBP4.5□□□□□ -1.69
TRS85YDR108W APC5Q08683 685 aa4.5□□□□□ -1.69
TRS85YDR108W HSP42Q12329 375 aa4.5□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 60.9 ms