RNA–Protein interactions for RNA: ENST00000637278.1

CLN5-217, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 2

Gene CLN5, Length 2,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-217ENST00000637278 GRXCR2A6NFK2 248 aa9.73□□□□□ -0.85
CLN5-217ENST00000637278 TNNI2P48788 182 aa9.73□□□□□ -0.85
CLN5-217ENST00000637278 TCEAL1Q15170 157 aa9.73□□□□□ -0.85
CLN5-217ENST00000637278 C19orf44Q9H6X5 657 aa9.73□□□□□ -0.85
CLN5-217ENST00000637278 SLAIN2Q9P270 581 aa9.73□□□□□ -0.85
CLN5-217ENST00000637278 SPATA31A6Q5VVP1 1343 aa9.73□□□□□ -0.85
CLN5-217ENST00000637278 PTCH1Q13635 1447 aa9.73□□□□□ -0.85
CLN5-217ENST00000637278 NHSL1Q5SYE7 1610 aa9.73□□□□□ -0.85
CLN5-217ENST00000637278 CCDC144BQ3MJ40 725 aa9.73□□□□□ -0.85
CLN5-217ENST00000637278 PPP4R3BQ5MIZ7 849 aa9.73□□□□□ -0.85
CLN5-217ENST00000637278 ZBTB12Q9Y330 459 aaPredicted RBP9.73□□□□□ -0.85
CLN5-217ENST00000637278 PPLO60437 1756 aa9.73□□□□□ -0.85
CLN5-217ENST00000637278 CREB3O43889 395 aa9.73□□□□□ -0.85
CLN5-217ENST00000637278 LAMC1P11047 1609 aa9.73□□□□□ -0.85
CLN5-217ENST00000637278 ATF3P18847 181 aa9.73□□□□□ -0.85
CLN5-217ENST00000637278 ANO2Q9NQ90 1003 aa9.73□□□□□ -0.85
CLN5-217ENST00000637278 NOP58Q9Y2X3 529 aaKnown RBP9.73□□□□□ -0.85
CLN5-217ENST00000637278 SETD1AO15047 1707 aaKnown RBP9.72□□□□□ -0.85
CLN5-217ENST00000637278 ADGRL3Q9HAR2 1447 aa9.72□□□□□ -0.85
CLN5-217ENST00000637278 ANKRD33BA6NCL7 494 aa9.72□□□□□ -0.85
CLN5-217ENST00000637278 GTF2F1P35269 517 aaKnown RBP eCLIP9.72□□□□□ -0.85
CLN5-217ENST00000637278 MAP2K5Q13163 448 aa9.72□□□□□ -0.85
CLN5-217ENST00000637278 EP400NLQ6ZTU2 488 aa9.72□□□□□ -0.85
CLN5-217ENST00000637278 FAN1Q9Y2M0 1017 aa9.72□□□□□ -0.85
CLN5-217ENST00000637278 ARID4AP29374 1257 aaPredicted RBP9.71□□□□□ -0.85
CLN5-217ENST00000637278 CCDC96Q2M329 555 aa9.71□□□□□ -0.85
CLN5-217ENST00000637278 U2SURPO15042 1029 aaKnown RBP9.71□□□□□ -0.86
CLN5-217ENST00000637278 ITGAEP38570 1179 aa9.71□□□□□ -0.86
CLN5-217ENST00000637278 BACH2Q9BYV9 841 aa9.71□□□□□ -0.86
CLN5-217ENST00000637278 TANGO6Q9C0B7 1094 aa9.71□□□□□ -0.86
CLN5-217ENST00000637278 RNF19AQ9NV58 838 aa9.71□□□□□ -0.86
CLN5-217ENST00000637278 CHPF2Q9P2E5 772 aa9.71□□□□□ -0.86
CLN5-217ENST00000637278 ASXL1Q8IXJ9 1541 aa9.71□□□□□ -0.86
CLN5-217ENST00000637278 PTPRUQ92729 1446 aa9.71□□□□□ -0.86
CLN5-217ENST00000637278 CCDC194A0A1B0GVG4 234 aa9.7□□□□□ -0.86
CLN5-217ENST00000637278 C7P10643 843 aa9.7□□□□□ -0.86
CLN5-217ENST00000637278 ERCC5P28715 1186 aaPredicted RBP9.7□□□□□ -0.86
CLN5-217ENST00000637278 ZNF513Q8N8E2 541 aaPredicted RBP9.7□□□□□ -0.86
CLN5-217ENST00000637278 UCN2Q96RP3 112 aa9.7□□□□□ -0.86
CLN5-217ENST00000637278 NALCNQ8IZF0 1738 aa9.7□□□□□ -0.86
CLN5-217ENST00000637278 CSPP1Q1MSJ5 1256 aa9.7□□□□□ -0.86
CLN5-217ENST00000637278 PCDHB8Q9UN66 801 aa9.7□□□□□ -0.86
CLN5-217ENST00000637278 PCDHB13Q9Y5F0 798 aa9.7□□□□□ -0.86
CLN5-217ENST00000637278 ZFYVE27Q5T4F4 411 aa9.69□□□□□ -0.86
CLN5-217ENST00000637278 PHF8Q9UPP1 1060 aa9.69□□□□□ -0.86
CLN5-217ENST00000637278 KNDC1Q76NI1 1749 aa9.69□□□□□ -0.86
CLN5-217ENST00000637278 PALM3A6NDB9 673 aaPredicted RBP9.69□□□□□ -0.86
CLN5-217ENST00000637278 TSHZ1Q6ZSZ6 1077 aa9.69□□□□□ -0.86
CLN5-217ENST00000637278 IFT172Q9UG01 1749 aa9.69□□□□□ -0.86
CLN5-217ENST00000637278 hCG_2014768A0A024R1R8 64 aa9.69□□□□□ -0.86
CLN5-217ENST00000637278 SH3BP5O60239 455 aa9.69□□□□□ -0.86
CLN5-217ENST00000637278 ZNF500O60304 480 aaPredicted RBP9.69□□□□□ -0.86
CLN5-217ENST00000637278 SH3D19Q5HYK7 790 aa9.69□□□□□ -0.86
CLN5-217ENST00000637278 RAVER1Q8IY67 606 aaKnown RBP9.69□□□□□ -0.86
CLN5-217ENST00000637278 STK26Q9P289 416 aa9.69□□□□□ -0.86
CLN5-217ENST00000637278 USTQ9Y2C2 406 aa9.69□□□□□ -0.86
CLN5-217ENST00000637278 MST1RQ04912 1400 aa9.68□□□□□ -0.86
CLN5-217ENST00000637278 SETD5Q9C0A6 1442 aa9.68□□□□□ -0.86
CLN5-217ENST00000637278 SPDYE2BA6NHP3 402 aa9.68□□□□□ -0.86
CLN5-217ENST00000637278 SPDYE5A6NIY4 337 aa9.68□□□□□ -0.86
CLN5-217ENST00000637278 SPDYE6P0CI01 402 aa9.68□□□□□ -0.86
CLN5-217ENST00000637278 RFC5P40937 340 aa9.68□□□□□ -0.86
CLN5-217ENST00000637278 SPDYE2Q495Y8 402 aa9.68□□□□□ -0.86
CLN5-217ENST00000637278 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.68□□□□□ -0.86
CLN5-217ENST00000637278 EMILIN3Q9NT22 766 aa9.68□□□□□ -0.86
CLN5-217ENST00000637278 CDC42BPGQ6DT37 1551 aa9.68□□□□□ -0.86
CLN5-217ENST00000637278 MDM2Q00987 491 aaPredicted RBP9.68□□□□□ -0.86
CLN5-217ENST00000637278 BEGAINQ9BUH8 593 aa9.68□□□□□ -0.86
CLN5-217ENST00000637278 JAZF1Q86VZ6 243 aa9.67□□□□□ -0.86
CLN5-217ENST00000637278 NPAS4Q8IUM7 802 aa9.67□□□□□ -0.86
CLN5-217ENST00000637278 STAG1Q8WVM7 1258 aa9.67□□□□□ -0.86
CLN5-217ENST00000637278 DDX27Q96GQ7 796 aaKnown RBP9.67□□□□□ -0.86
CLN5-217ENST00000637278 MRPL42Q9Y6G3 142 aaKnown RBP9.67□□□□□ -0.86
CLN5-217ENST00000637278 MINK1Q8N4C8 1332 aaPredicted RBP9.67□□□□□ -0.86
CLN5-217ENST00000637278 SLFNL1Q499Z3 407 aa9.67□□□□□ -0.86
CLN5-217ENST00000637278 EGFLAMQ63HQ2 1017 aa9.67□□□□□ -0.86
CLN5-217ENST00000637278 PPP1R12CQ9BZL4 782 aa9.67□□□□□ -0.86
CLN5-217ENST00000637278 CDK12Q9NYV4 1490 aaPredicted RBP9.66□□□□□ -0.86
CLN5-217ENST00000637278 ANKRD30BQ9BXX2 1392 aa9.66□□□□□ -0.86
CLN5-217ENST00000637278 VAC14Q08AM6 782 aa9.66□□□□□ -0.86
CLN5-217ENST00000637278 CASC1Q6TDU7 716 aa9.66□□□□□ -0.86
CLN5-217ENST00000637278 WASHC2AQ641Q2 1341 aa9.66□□□□□ -0.86
CLN5-217ENST00000637278 TCERG1O14776 1098 aaKnown RBP9.66□□□□□ -0.86
CLN5-217ENST00000637278 PAK3O75914 559 aaPredicted RBP9.66□□□□□ -0.86
CLN5-217ENST00000637278 LMOD3Q0VAK6 560 aa9.66□□□□□ -0.86
CLN5-217ENST00000637278 TFIP11Q9UBB9 837 aaKnown RBP9.66□□□□□ -0.86
CLN5-217ENST00000637278 CCDC144AA2RUR9 1427 aa9.66□□□□□ -0.86
CLN5-217ENST00000637278 METP08581 1390 aa9.66□□□□□ -0.86
CLN5-217ENST00000637278 CCER2I3L3R5 266 aa9.65□□□□□ -0.86
CLN5-217ENST00000637278 HSP90AB3PQ58FF7 597 aa9.65□□□□□ -0.86
CLN5-217ENST00000637278 ZNF772Q68DY9 489 aaPredicted RBP9.65□□□□□ -0.86
CLN5-217ENST00000637278 OTUD6BQ8N6M0 293 aa9.65□□□□□ -0.86
CLN5-217ENST00000637278 CEP120Q8N960 986 aa9.65□□□□□ -0.86
CLN5-217ENST00000637278 PTPROQ16827 1216 aa9.65□□□□□ -0.86
CLN5-217ENST00000637278 TRIM52Q96A61 297 aa9.65□□□□□ -0.86
CLN5-217ENST00000637278 TECPR2O15040 1411 aa9.65□□□□□ -0.87
CLN5-217ENST00000637278 SMAP1Q8IYB5 467 aaPredicted RBP9.65□□□□□ -0.87
CLN5-217ENST00000637278 MORC4Q8TE76 937 aa9.65□□□□□ -0.87
CLN5-217ENST00000637278 TRIM44Q96DX7 344 aaPredicted RBP9.65□□□□□ -0.87
CLN5-217ENST00000637278 BIN2Q9UBW5 565 aaPredicted RBP9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms