RNA–Protein interactions for RNA: ENST00000637278.1

CLN5-217, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 2

Gene CLN5, Length 2,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-217ENST00000637278 NISCHQ9Y2I1 1504 aa16.18■□□□□ 0.18
CLN5-217ENST00000637278 CHIC1Q5VXU3 224 aa16.04■□□□□ 0.16
CLN5-217ENST00000637278 SLC24A1O60721 1099 aa15.93■□□□□ 0.14
CLN5-217ENST00000637278 EHMT2Q96KQ7 1210 aa15.69■□□□□ 0.1
CLN5-217ENST00000637278 AEBP2Q6ZN18 517 aaPredicted RBP15.54■□□□□ 0.08
CLN5-217ENST00000637278 PLPPR3Q6T4P5 718 aa15.26■□□□□ 0.03
CLN5-217ENST00000637278 RTN4Q9NQC3 1192 aaKnown RBP14.85□□□□□ -0.03
CLN5-217ENST00000637278 PHF23Q9BUL5 403 aaPredicted RBP14.82□□□□□ -0.04
CLN5-217ENST00000637278 CCDC180Q9P1Z9 1646 aa14.68□□□□□ -0.06
CLN5-217ENST00000637278 KCNA4P22459 653 aa14.44□□□□□ -0.1
CLN5-217ENST00000637278 CSRNP3Q8WYN3 585 aa14.39□□□□□ -0.11
CLN5-217ENST00000637278 PRKCSHP14314 528 aaPredicted RBP14.36□□□□□ -0.11
CLN5-217ENST00000637278 ABCC9O60706 1549 aa14.35□□□□□ -0.11
CLN5-217ENST00000637278 NCBP3Q53F19 620 aaKnown RBP13.99□□□□□ -0.17
CLN5-217ENST00000637278 DAXXQ9UER7 740 aaPredicted RBP13.96□□□□□ -0.17
CLN5-217ENST00000637278 AMER1Q5JTC6 1135 aaPredicted RBP13.91□□□□□ -0.18
CLN5-217ENST00000637278 RB1CC1Q8TDY2 1594 aa13.88□□□□□ -0.19
CLN5-217ENST00000637278 NACADO15069 1562 aa13.81□□□□□ -0.2
CLN5-217ENST00000637278 PELP1Q8IZL8 1130 aaKnown RBP13.79□□□□□ -0.2
CLN5-217ENST00000637278 MYT1Q01538 1121 aa13.79□□□□□ -0.2
CLN5-217ENST00000637278 TIMELESSQ9UNS1 1208 aa13.76□□□□□ -0.21
CLN5-217ENST00000637278 MYO15BQ96JP2 1530 aa13.7□□□□□ -0.22
CLN5-217ENST00000637278 ADRA2BP18089 450 aa13.62□□□□□ -0.23
CLN5-217ENST00000637278 SLC4A1APQ9BWU0 796 aaKnown RBP13.57□□□□□ -0.24
CLN5-217ENST00000637278 TULP1O00294 542 aaPredicted RBP13.55□□□□□ -0.24
CLN5-217ENST00000637278 DCAF1Q9Y4B6 1507 aa13.51□□□□□ -0.25
CLN5-217ENST00000637278 UNC13AQ9UPW8 1703 aa13.49□□□□□ -0.25
CLN5-217ENST00000637278 TTBK1Q5TCY1 1321 aaPredicted RBP13.48□□□□□ -0.25
CLN5-217ENST00000637278 ZCCHC6Q5VYS8 1495 aaKnown RBP13.45□□□□□ -0.26
CLN5-217ENST00000637278 TAOK2Q9UL54 1235 aa13.45□□□□□ -0.26
CLN5-217ENST00000637278 SHROOM4Q9ULL8 1493 aa13.44□□□□□ -0.26
CLN5-217ENST00000637278 ZBTB22O15209 634 aa13.44□□□□□ -0.26
CLN5-217ENST00000637278 TPRNQ4KMQ1 711 aa13.39□□□□□ -0.27
CLN5-217ENST00000637278 DCAF8L2P0C7V8 631 aa13.38□□□□□ -0.27
CLN5-217ENST00000637278 BICRAQ9NZM4 1560 aa13.37□□□□□ -0.27
CLN5-217ENST00000637278 APLP2Q06481 763 aa13.32□□□□□ -0.28
CLN5-217ENST00000637278 DNAJC5BQ9UF47 199 aa13.27□□□□□ -0.28
CLN5-217ENST00000637278 PABPN1Q86U42 306 aaKnown RBP eCLIP13.26□□□□□ -0.29
CLN5-217ENST00000637278 ERICH6Q7L0X2 663 aa13.24□□□□□ -0.29
CLN5-217ENST00000637278 KLHL34Q8N239 644 aa13.18□□□□□ -0.3
CLN5-217ENST00000637278 SCRIBQ14160 1630 aa13.17□□□□□ -0.3
CLN5-217ENST00000637278 ARXQ96QS3 562 aa13.14□□□□□ -0.31
CLN5-217ENST00000637278 HAP1P54257 671 aaPredicted RBP13.12□□□□□ -0.31
CLN5-217ENST00000637278 PLCB2Q00722 1185 aa13.06□□□□□ -0.32
CLN5-217ENST00000637278 EIF4G1Q04637 1599 aaKnown RBP13.06□□□□□ -0.32
CLN5-217ENST00000637278 CC2D2AQ9P2K1 1620 aa13.06□□□□□ -0.32
CLN5-217ENST00000637278 BCANQ96GW7 911 aa13.05□□□□□ -0.32
CLN5-217ENST00000637278 PODXL2Q9NZ53 605 aa13.01□□□□□ -0.33
CLN5-217ENST00000637278 CECR2Q9BXF3 1484 aa12.99□□□□□ -0.33
CLN5-217ENST00000637278 FKBP8Q14318 412 aa12.91□□□□□ -0.34
CLN5-217ENST00000637278 NPM3O75607 178 aaKnown RBP12.88□□□□□ -0.35
CLN5-217ENST00000637278 GTF3C3Q9Y5Q9 886 aa12.88□□□□□ -0.35
CLN5-217ENST00000637278 HOMEZQ8IX15 550 aa12.87□□□□□ -0.35
CLN5-217ENST00000637278 FBLN2P98095 1184 aa12.83□□□□□ -0.36
CLN5-217ENST00000637278 PPP6R1Q9UPN7 881 aa12.81□□□□□ -0.36
CLN5-217ENST00000637278 KDM2AQ9Y2K7 1162 aa12.79□□□□□ -0.36
CLN5-217ENST00000637278 RANGAP1P46060 587 aaPredicted RBP12.79□□□□□ -0.36
CLN5-217ENST00000637278 SUPT5HO00267 1087 aaKnown RBP12.72□□□□□ -0.37
CLN5-217ENST00000637278 BCL11AQ9H165 835 aa12.7□□□□□ -0.38
CLN5-217ENST00000637278 NCAPD3P42695 1498 aa12.67□□□□□ -0.38
CLN5-217ENST00000637278 EIF5BO60841 1220 aaKnown RBP12.67□□□□□ -0.38
CLN5-217ENST00000637278 SMARCA2P51531 1590 aa12.67□□□□□ -0.38
CLN5-217ENST00000637278 HMGXB3Q12766 1538 aa12.66□□□□□ -0.38
CLN5-217ENST00000637278 SMARCA4P51532 1647 aa12.64□□□□□ -0.39
CLN5-217ENST00000637278 BAZ1AQ9NRL2 1556 aaPredicted RBP12.62□□□□□ -0.39
CLN5-217ENST00000637278 ATAD2BQ9ULI0 1458 aa12.6□□□□□ -0.39
CLN5-217ENST00000637278 PEG3Q9GZU2 1588 aa12.59□□□□□ -0.39
CLN5-217ENST00000637278 TMEM132AQ24JP5 1023 aa12.58□□□□□ -0.4
CLN5-217ENST00000637278 TRIM26Q12899 539 aaPredicted RBP12.56□□□□□ -0.4
CLN5-217ENST00000637278 CUX2O14529 1486 aa12.55□□□□□ -0.4
CLN5-217ENST00000637278 C14orf37Q86TY3 774 aa12.54□□□□□ -0.4
CLN5-217ENST00000637278 UBTFP17480 764 aaKnown RBP12.53□□□□□ -0.4
CLN5-217ENST00000637278 NPM2Q86SE8 214 aaKnown RBP12.53□□□□□ -0.4
CLN5-217ENST00000637278 PLEKHG5O94827 1062 aa12.52□□□□□ -0.4
CLN5-217ENST00000637278 FAM9AQ8IZU1 332 aaPredicted RBP12.51□□□□□ -0.41
CLN5-217ENST00000637278 BAZ1BQ9UIG0 1483 aaKnown RBP12.5□□□□□ -0.41
CLN5-217ENST00000637278 ERCC6Q03468 1493 aa12.47□□□□□ -0.41
CLN5-217ENST00000637278 LAMC3Q9Y6N6 1575 aa12.45□□□□□ -0.42
CLN5-217ENST00000637278 PPP4R3CPQ6ZMV5 832 aa12.42□□□□□ -0.42
CLN5-217ENST00000637278 HRCP23327 699 aa12.4□□□□□ -0.42
CLN5-217ENST00000637278 MROH2BQ7Z745 1585 aa12.4□□□□□ -0.42
CLN5-217ENST00000637278 LOC105371045A0A1W2PR82 267 aa12.38□□□□□ -0.43
CLN5-217ENST00000637278 THOC2Q8NI27 1593 aaKnown RBP12.34□□□□□ -0.43
CLN5-217ENST00000637278 VSIG10Q8N0Z9 540 aa12.34□□□□□ -0.43
CLN5-217ENST00000637278 PDS5BQ9NTI5 1447 aa12.32□□□□□ -0.44
CLN5-217ENST00000637278 DNAJC5Q9H3Z4 198 aa12.31□□□□□ -0.44
CLN5-217ENST00000637278 NESP48681 1621 aa12.31□□□□□ -0.44
CLN5-217ENST00000637278 KIF21AQ7Z4S6 1674 aa12.27□□□□□ -0.44
CLN5-217ENST00000637278 WIZO95785 1651 aa12.26□□□□□ -0.45
CLN5-217ENST00000637278 TRHP20396 242 aaPredicted RBP12.25□□□□□ -0.45
CLN5-217ENST00000637278 CADPSQ9ULU8 1353 aa12.25□□□□□ -0.45
CLN5-217ENST00000637278 TOP2AP11388 1531 aaKnown RBP12.22□□□□□ -0.45
CLN5-217ENST00000637278 CFAP44Q96MT7 982 aa12.22□□□□□ -0.45
CLN5-217ENST00000637278 MRC2Q9UBG0 1479 aa12.22□□□□□ -0.45
CLN5-217ENST00000637278 WDR62O43379 1518 aa12.21□□□□□ -0.46
CLN5-217ENST00000637278 FOXD4L1Q9NU39 408 aa12.18□□□□□ -0.46
CLN5-217ENST00000637278 TSHZ2Q9NRE2 1034 aa12.18□□□□□ -0.46
CLN5-217ENST00000637278 PRDM2Q13029 1718 aa12.17□□□□□ -0.46
CLN5-217ENST00000637278 PAXIP1Q6ZW49 1069 aaPredicted RBP12.16□□□□□ -0.46
CLN5-217ENST00000637278 CEP164Q9UPV0 1460 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms