RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.88□□□□□ -1.47
VPS13D-214ENST00000620676 ZNF644Q9H582 1327 aaPredicted RBP5.88□□□□□ -1.47
VPS13D-214ENST00000620676 TMX3Q96JJ7 454 aa5.88□□□□□ -1.47
VPS13D-214ENST00000620676 UBE4AQ14139 1066 aa5.88□□□□□ -1.47
VPS13D-214ENST00000620676 FAM170AA1A519 330 aa5.88□□□□□ -1.47
VPS13D-214ENST00000620676 GPT2Q8TD30 523 aa5.88□□□□□ -1.47
VPS13D-214ENST00000620676 ATRIPQ8WXE1 791 aa5.88□□□□□ -1.47
VPS13D-214ENST00000620676 PRDM4Q9UKN5 801 aa5.88□□□□□ -1.47
VPS13D-214ENST00000620676 IVLP07476 585 aa5.88□□□□□ -1.47
VPS13D-214ENST00000620676 ZNF165P49910 485 aa5.88□□□□□ -1.47
VPS13D-214ENST00000620676 IFT81Q8WYA0 676 aa5.88□□□□□ -1.47
VPS13D-214ENST00000620676 MTHFSP49914 203 aa5.88□□□□□ -1.47
VPS13D-214ENST00000620676 USH1CQ9Y6N9 552 aa5.88□□□□□ -1.47
VPS13D-214ENST00000620676 LRMPQ12912 555 aa5.87□□□□□ -1.47
VPS13D-214ENST00000620676 MSL1Q68DK7 614 aa5.87□□□□□ -1.47
VPS13D-214ENST00000620676 NUP133Q8WUM0 1156 aa5.87□□□□□ -1.47
VPS13D-214ENST00000620676 ZNF396Q96N95 335 aaPredicted RBP5.87□□□□□ -1.47
VPS13D-214ENST00000620676 PEX19P40855 299 aa5.87□□□□□ -1.47
VPS13D-214ENST00000620676 AOPEPQ8N6M6 819 aa5.87□□□□□ -1.47
VPS13D-214ENST00000620676 MARCH6O60337 910 aa5.87□□□□□ -1.47
VPS13D-214ENST00000620676 RPSAP08865 295 aaKnown RBP5.87□□□□□ -1.47
VPS13D-214ENST00000620676 KSR1Q8IVT5 923 aa5.87□□□□□ -1.47
VPS13D-214ENST00000620676 RUFY2Q8WXA3 655 aa5.87□□□□□ -1.47
VPS13D-214ENST00000620676 PAIP2Q9BPZ3 127 aaKnown RBP5.87□□□□□ -1.47
VPS13D-214ENST00000620676 RRP15Q9Y3B9 282 aaKnown RBP5.87□□□□□ -1.47
VPS13D-214ENST00000620676 ZNF215Q9UL58 517 aaPredicted RBP5.87□□□□□ -1.47
VPS13D-214ENST00000620676 PKP1Q13835 747 aa5.87□□□□□ -1.47
VPS13D-214ENST00000620676 LMBRD1Q9NUN5 540 aa5.87□□□□□ -1.47
VPS13D-214ENST00000620676 BIN2Q9UBW5 565 aaPredicted RBP5.87□□□□□ -1.47
VPS13D-214ENST00000620676 CPA1P15085 419 aa5.87□□□□□ -1.47
VPS13D-214ENST00000620676 PTPN21Q16825 1174 aa5.87□□□□□ -1.47
VPS13D-214ENST00000620676 SPG7Q9UQ90 795 aa5.87□□□□□ -1.47
VPS13D-214ENST00000620676 C9orf78Q9NZ63 289 aaPredicted RBP5.87□□□□□ -1.47
VPS13D-214ENST00000620676 G3BP2Q9UN86 482 aaKnown RBP5.87□□□□□ -1.47
VPS13D-214ENST00000620676 GJB2P29033 226 aa5.87□□□□□ -1.47
VPS13D-214ENST00000620676 DIXDC1Q155Q3 683 aa5.87□□□□□ -1.47
VPS13D-214ENST00000620676 CEP89Q96ST8 783 aa5.87□□□□□ -1.47
VPS13D-214ENST00000620676 FSD1Q9BTV5 496 aa5.87□□□□□ -1.47
VPS13D-214ENST00000620676 SURF6O75683 361 aaKnown RBP5.87□□□□□ -1.47
VPS13D-214ENST00000620676 HPDP32754 393 aaPredicted RBP5.87□□□□□ -1.47
VPS13D-214ENST00000620676 ERCC6LQ2NKX8 1250 aa5.87□□□□□ -1.47
VPS13D-214ENST00000620676 NRBP1Q9UHY1 535 aa5.87□□□□□ -1.47
VPS13D-214ENST00000620676 TRIM68Q6AZZ1 485 aa5.87□□□□□ -1.47
VPS13D-214ENST00000620676 CCT2P78371 535 aaKnown RBP5.87□□□□□ -1.47
VPS13D-214ENST00000620676 MRFAP1L1Q96HT8 127 aa5.87□□□□□ -1.47
VPS13D-214ENST00000620676 JPH2Q9BR39 696 aaPredicted RBP5.87□□□□□ -1.47
VPS13D-214ENST00000620676 STX6O43752 255 aa5.86□□□□□ -1.47
VPS13D-214ENST00000620676 CECR2Q9BXF3 1484 aa5.86□□□□□ -1.47
VPS13D-214ENST00000620676 USP16Q9Y5T5 823 aa5.86□□□□□ -1.47
VPS13D-214ENST00000620676 FSIP1Q8NA03 581 aa5.86□□□□□ -1.47
VPS13D-214ENST00000620676 CCDC12Q8WUD4 166 aaPredicted RBP5.86□□□□□ -1.47
VPS13D-214ENST00000620676 MX1P20591 662 aa5.86□□□□□ -1.47
VPS13D-214ENST00000620676 PSMA5P28066 241 aa5.86□□□□□ -1.47
VPS13D-214ENST00000620676 NBPF11Q86T75 865 aa5.86□□□□□ -1.47
VPS13D-214ENST00000620676 GGNBP2Q9H3C7 697 aa5.86□□□□□ -1.47
VPS13D-214ENST00000620676 SYT1P21579 422 aa5.86□□□□□ -1.47
VPS13D-214ENST00000620676 DNM1Q05193 864 aaKnown RBP5.86□□□□□ -1.47
VPS13D-214ENST00000620676 CCDC178Q5BJE1 867 aa5.86□□□□□ -1.47
VPS13D-214ENST00000620676 WWC2Q6AWC2 1192 aa5.86□□□□□ -1.47
VPS13D-214ENST00000620676 TMEM51Q9NW97 253 aa5.86□□□□□ -1.47
VPS13D-214ENST00000620676 CAPN7Q9Y6W3 813 aa5.86□□□□□ -1.47
VPS13D-214ENST00000620676 CCDC148Q8NFR7 591 aa5.86□□□□□ -1.47
VPS13D-214ENST00000620676 PPM1EQ8WY54 764 aa5.86□□□□□ -1.47
VPS13D-214ENST00000620676 TMEM63CQ9P1W3 806 aa5.86□□□□□ -1.47
VPS13D-214ENST00000620676 EPB41L2O43491 1005 aaKnown RBP5.86□□□□□ -1.47
VPS13D-214ENST00000620676 A0A087WWV3 80 aa5.86□□□□□ -1.47
VPS13D-214ENST00000620676 ZSCAN12O43309 604 aa5.86□□□□□ -1.47
VPS13D-214ENST00000620676 IFNKQ9P0W0 207 aa5.86□□□□□ -1.47
VPS13D-214ENST00000620676 ZNF500O60304 480 aaPredicted RBP5.86□□□□□ -1.47
VPS13D-214ENST00000620676 ERC1Q8IUD2 1116 aa5.86□□□□□ -1.47
VPS13D-214ENST00000620676 PDE11AQ9HCR9 933 aa5.86□□□□□ -1.47
VPS13D-214ENST00000620676 SUFUQ9UMX1 484 aa5.86□□□□□ -1.47
VPS13D-214ENST00000620676 RNASE9P60153 205 aaKnown RBP5.86□□□□□ -1.47
VPS13D-214ENST00000620676 MAP2K1Q02750 393 aaPredicted RBP5.86□□□□□ -1.47
VPS13D-214ENST00000620676 TACO1Q9BSH4 297 aaKnown RBP5.86□□□□□ -1.47
VPS13D-214ENST00000620676 SMIM23A6NLE4 172 aa5.86□□□□□ -1.47
VPS13D-214ENST00000620676 NEFHP12036 1026 aa5.86□□□□□ -1.47
VPS13D-214ENST00000620676 FKBP5Q13451 457 aaPredicted RBP5.86□□□□□ -1.47
VPS13D-214ENST00000620676 EIF3AQ14152 1382 aaKnown RBP5.86□□□□□ -1.47
VPS13D-214ENST00000620676 UVSSAQ2YD98 709 aa5.86□□□□□ -1.47
VPS13D-214ENST00000620676 CCDC121Q6ZUS5 278 aa5.86□□□□□ -1.47
VPS13D-214ENST00000620676 SMARCE1Q969G3 411 aa5.86□□□□□ -1.47
VPS13D-214ENST00000620676 BUB1BO60566 1050 aaPredicted RBP5.85□□□□□ -1.47
VPS13D-214ENST00000620676 EVCP57679 992 aa5.85□□□□□ -1.47
VPS13D-214ENST00000620676 NUCB1Q02818 461 aa5.85□□□□□ -1.47
VPS13D-214ENST00000620676 FHOD3Q2V2M9 1422 aa5.85□□□□□ -1.47
VPS13D-214ENST00000620676 CCDC171Q6TFL3 1326 aa5.85□□□□□ -1.47
VPS13D-214ENST00000620676 EBAG9O00559 213 aa5.85□□□□□ -1.47
VPS13D-214ENST00000620676 TBC1D31Q96DN5 1066 aa5.85□□□□□ -1.47
VPS13D-214ENST00000620676 PPP2R3AQ06190 1150 aa5.85□□□□□ -1.47
VPS13D-214ENST00000620676 GOLGA8FQ08AF8 430 aa5.85□□□□□ -1.47
VPS13D-214ENST00000620676 GOLGA8DPQ0D2H9 430 aa5.85□□□□□ -1.47
VPS13D-214ENST00000620676 ATF7IPQ6VMQ6 1270 aa5.85□□□□□ -1.47
VPS13D-214ENST00000620676 JRKLQ9Y4A0 524 aa5.85□□□□□ -1.47
VPS13D-214ENST00000620676 INPP5BP32019 993 aa5.85□□□□□ -1.47
VPS13D-214ENST00000620676 ZNF75DP51815 510 aa5.85□□□□□ -1.47
VPS13D-214ENST00000620676 EIF5P55010 431 aaKnown RBP5.85□□□□□ -1.47
VPS13D-214ENST00000620676 INCENPQ9NQS7 918 aa5.85□□□□□ -1.47
VPS13D-214ENST00000620676 HSPA4P34932 840 aa5.85□□□□□ -1.47
VPS13D-214ENST00000620676 ATP6V1AP38606 617 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms