RNA–Protein interactions for RNA: ENST00000620581.4

GRIA3-208, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIA3, Length 2,991 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-208ENST00000620581 VSIG10Q8N0Z9 540 aa17.55■□□□□ 0.4
GRIA3-208ENST00000620581 LTV1Q96GA3 475 aaPredicted RBP17.55■□□□□ 0.4
GRIA3-208ENST00000620581 SLC52A2Q9HAB3 445 aa17.55■□□□□ 0.4
GRIA3-208ENST00000620581 NUP188Q5SRE5 1749 aa17.55■□□□□ 0.4
GRIA3-208ENST00000620581 DDB1Q16531 1140 aa17.55■□□□□ 0.4
GRIA3-208ENST00000620581 RTF1Q92541 710 aaKnown RBP17.55■□□□□ 0.4
GRIA3-208ENST00000620581 STRN4Q9NRL3 753 aa17.55■□□□□ 0.4
GRIA3-208ENST00000620581 RGS17Q9UGC6 210 aaPredicted RBP17.55■□□□□ 0.4
GRIA3-208ENST00000620581 RNF123Q5XPI4 1314 aa17.54■□□□□ 0.4
GRIA3-208ENST00000620581 IL17REQ8NFR9 667 aa17.54■□□□□ 0.4
GRIA3-208ENST00000620581 QTRT2Q9H974 415 aaKnown RBP17.54■□□□□ 0.4
GRIA3-208ENST00000620581 PXDNLA1KZ92 1463 aa17.54■□□□□ 0.4
GRIA3-208ENST00000620581 TAF7Q15545 349 aaPredicted RBP17.54■□□□□ 0.4
GRIA3-208ENST00000620581 DUSP27Q5VZP5 1158 aa17.53■□□□□ 0.4
GRIA3-208ENST00000620581 CCDC146Q8IYE0 955 aa17.53■□□□□ 0.4
GRIA3-208ENST00000620581 USHBP1Q8N6Y0 703 aa17.53■□□□□ 0.4
GRIA3-208ENST00000620581 HNRNPUQ00839 825 aaKnown RBP eCLIP17.52■□□□□ 0.4
GRIA3-208ENST00000620581 SCN7AQ01118 1682 aa17.52■□□□□ 0.39
GRIA3-208ENST00000620581 ANKRD36CQ5JPF3 1778 aa17.51■□□□□ 0.39
GRIA3-208ENST00000620581 ALDH1L2Q3SY69 923 aa17.5■□□□□ 0.39
GRIA3-208ENST00000620581 MARCH10Q8NA82 808 aaPredicted RBP17.49■□□□□ 0.39
GRIA3-208ENST00000620581 ZBTB7CA1YPR0 619 aa17.49■□□□□ 0.39
GRIA3-208ENST00000620581 RXRBP28702 533 aa17.49■□□□□ 0.39
GRIA3-208ENST00000620581 FANCIQ9NVI1 1328 aa17.49■□□□□ 0.39
GRIA3-208ENST00000620581 SMARCC1Q92922 1105 aaPredicted RBP17.49■□□□□ 0.39
GRIA3-208ENST00000620581 FAM196AQ6ZSG2 479 aa17.48■□□□□ 0.39
GRIA3-208ENST00000620581 ILDR1Q86SU0 546 aaPredicted RBP17.47■□□□□ 0.39
GRIA3-208ENST00000620581 SEPT12Q8IYM1 358 aa17.46■□□□□ 0.39
GRIA3-208ENST00000620581 TEX13AQ9BXU3 409 aaPredicted RBP17.46■□□□□ 0.39
GRIA3-208ENST00000620581 LAMB2P55268 1798 aa17.45■□□□□ 0.38
GRIA3-208ENST00000620581 C4BP0C0L5 1744 aa17.45■□□□□ 0.38
GRIA3-208ENST00000620581 UBR3Q6ZT12 1888 aa17.45■□□□□ 0.38
GRIA3-208ENST00000620581 BCL11BQ9C0K0 894 aaPredicted RBP17.45■□□□□ 0.38
GRIA3-208ENST00000620581 ARFGEF2Q9Y6D5 1785 aa17.44■□□□□ 0.38
GRIA3-208ENST00000620581 CCDC125Q86Z20 511 aa17.44■□□□□ 0.38
GRIA3-208ENST00000620581 FAM98CQ17RN3 349 aaKnown RBP17.43■□□□□ 0.38
GRIA3-208ENST00000620581 EIF4A1P60842 406 aaKnown RBP17.43■□□□□ 0.38
GRIA3-208ENST00000620581 MBIPQ9NS73 344 aa17.43■□□□□ 0.38
GRIA3-208ENST00000620581 TEFQ10587 303 aa17.43■□□□□ 0.38
GRIA3-208ENST00000620581 CNGB1Q14028 1251 aaPredicted RBP17.43■□□□□ 0.38
GRIA3-208ENST00000620581 KRT27Q7Z3Y8 459 aa17.43■□□□□ 0.38
GRIA3-208ENST00000620581 TUBGCP6Q96RT7 1819 aa17.42■□□□□ 0.38
GRIA3-208ENST00000620581 C4AP0C0L4 1744 aa17.42■□□□□ 0.38
GRIA3-208ENST00000620581 ARHGAP45Q92619 1136 aa17.41■□□□□ 0.38
GRIA3-208ENST00000620581 CABP4P57796 275 aa17.4■□□□□ 0.38
GRIA3-208ENST00000620581 LGR6Q9HBX8 967 aa17.4■□□□□ 0.38
GRIA3-208ENST00000620581 CENPBP07199 599 aaPredicted RBP17.4■□□□□ 0.38
GRIA3-208ENST00000620581 ZNF790Q6PG37 636 aa17.4■□□□□ 0.38
GRIA3-208ENST00000620581 POTEAQ6S8J7 498 aa17.4■□□□□ 0.38
GRIA3-208ENST00000620581 TMOD3Q9NYL9 352 aa17.4■□□□□ 0.38
GRIA3-208ENST00000620581 PLSCR1O15162 318 aa17.39■□□□□ 0.37
GRIA3-208ENST00000620581 FMNL2Q96PY5 1086 aa17.39■□□□□ 0.37
GRIA3-208ENST00000620581 ATP10DQ9P241 1426 aa17.39■□□□□ 0.37
GRIA3-208ENST00000620581 MCM10Q7L590 875 aa17.39■□□□□ 0.37
GRIA3-208ENST00000620581 CNTNAP4Q9C0A0 1308 aa17.39■□□□□ 0.37
GRIA3-208ENST00000620581 SLC27A3Q5K4L6 730 aa17.38■□□□□ 0.37
GRIA3-208ENST00000620581 RC3H1Q5TC82 1133 aaKnown RBP17.38■□□□□ 0.37
GRIA3-208ENST00000620581 BTBD11A6QL63 1104 aa17.38■□□□□ 0.37
GRIA3-208ENST00000620581 AAMPQ13685 434 aa17.38■□□□□ 0.37
GRIA3-208ENST00000620581 MPRIPQ6WCQ1 1025 aa17.37■□□□□ 0.37
GRIA3-208ENST00000620581 TSPYL4Q9UJ04 414 aa17.37■□□□□ 0.37
GRIA3-208ENST00000620581 SPINK5Q9NQ38 1064 aaPredicted RBP17.37■□□□□ 0.37
GRIA3-208ENST00000620581 RRP7AQ9Y3A4 280 aaKnown RBP17.37■□□□□ 0.37
GRIA3-208ENST00000620581 NRXN2Q9P2S2 1712 aa17.36■□□□□ 0.37
GRIA3-208ENST00000620581 VAMP4O75379 141 aa17.36■□□□□ 0.37
GRIA3-208ENST00000620581 ERICH6BQ5W0A0 696 aa17.36■□□□□ 0.37
GRIA3-208ENST00000620581 PIGBQ92521 554 aa17.36■□□□□ 0.37
GRIA3-208ENST00000620581 PTPRCP08575 1304 aa17.36■□□□□ 0.37
GRIA3-208ENST00000620581 ATG3Q9NT62 314 aa17.36■□□□□ 0.37
GRIA3-208ENST00000620581 GIGYF1O75420 1035 aaPredicted RBP17.35■□□□□ 0.37
GRIA3-208ENST00000620581 CCDC9Q9Y3X0 531 aaKnown RBP17.35■□□□□ 0.37
GRIA3-208ENST00000620581 KIF16BQ96L93 1317 aa17.35■□□□□ 0.37
GRIA3-208ENST00000620581 SNRPA1P09661 255 aaKnown RBP17.35■□□□□ 0.37
GRIA3-208ENST00000620581 CASZ1Q86V15 1759 aa17.34■□□□□ 0.37
GRIA3-208ENST00000620581 PALLDQ8WX93 1383 aa17.34■□□□□ 0.37
GRIA3-208ENST00000620581 MS4A1P11836 297 aa17.34■□□□□ 0.37
GRIA3-208ENST00000620581 COL15A1P39059 1388 aa17.34■□□□□ 0.37
GRIA3-208ENST00000620581 RIC1Q4ADV7 1423 aa17.32■□□□□ 0.36
GRIA3-208ENST00000620581 MYH14Q7Z406 1995 aaKnown RBP17.32■□□□□ 0.36
GRIA3-208ENST00000620581 NFATC2IPQ8NCF5 419 aa17.32■□□□□ 0.36
GRIA3-208ENST00000620581 RARSP54136 660 aaKnown RBP17.31■□□□□ 0.36
GRIA3-208ENST00000620581 CCDC30Q5VVM6 783 aa17.31■□□□□ 0.36
GRIA3-208ENST00000620581 TWISTNBQ3B726 338 aaPredicted RBP17.31■□□□□ 0.36
GRIA3-208ENST00000620581 TTC5Q8N0Z6 440 aa17.31■□□□□ 0.36
GRIA3-208ENST00000620581 NUP98P52948 1817 aa17.31■□□□□ 0.36
GRIA3-208ENST00000620581 LRP10Q7Z4F1 713 aa17.31■□□□□ 0.36
GRIA3-208ENST00000620581 DCTN1Q14203 1278 aa17.3■□□□□ 0.36
GRIA3-208ENST00000620581 DDX54Q8TDD1 881 aaKnown RBP17.3■□□□□ 0.36
GRIA3-208ENST00000620581 CDCA7LQ96GN5 454 aa17.3■□□□□ 0.36
GRIA3-208ENST00000620581 EXOSC9Q06265 439 aaKnown RBP17.3■□□□□ 0.36
GRIA3-208ENST00000620581 AFDNP55196 1824 aaKnown RBP17.29■□□□□ 0.36
GRIA3-208ENST00000620581 PDE3AQ14432 1141 aa17.29■□□□□ 0.36
GRIA3-208ENST00000620581 MRPL50Q8N5N7 158 aaKnown RBP17.29■□□□□ 0.36
GRIA3-208ENST00000620581 ADRA2BP18089 450 aa17.28■□□□□ 0.36
GRIA3-208ENST00000620581 HYPKQ9NX55 129 aa17.28■□□□□ 0.36
GRIA3-208ENST00000620581 DDX21Q9NR30 783 aaKnown RBP eCLIP17.28■□□□□ 0.36
GRIA3-208ENST00000620581 RCAN3Q9UKA8 241 aa17.28■□□□□ 0.36
GRIA3-208ENST00000620581 PRIM1P49642 420 aaKnown RBP17.28■□□□□ 0.36
GRIA3-208ENST00000620581 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.28■□□□□ 0.36
GRIA3-208ENST00000620581 THUMPD2Q9BTF0 503 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms