RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 SPG7Q9UQ90 795 aa16.95■□□□□ 0.3
CSNK1D-217ENST00000581241 RTEL1-TNFRSF6BF6WH68 1400 aa16.95■□□□□ 0.3
CSNK1D-217ENST00000581241 GSDMDP57764 484 aa16.95■□□□□ 0.3
CSNK1D-217ENST00000581241 KIF1BPQ96EK5 621 aa16.95■□□□□ 0.3
CSNK1D-217ENST00000581241 BTBD11A6QL63 1104 aa16.94■□□□□ 0.3
CSNK1D-217ENST00000581241 KIF4BQ2VIQ3 1234 aa16.94■□□□□ 0.3
CSNK1D-217ENST00000581241 UVSSAQ2YD98 709 aa16.94■□□□□ 0.3
CSNK1D-217ENST00000581241 FKBP15Q5T1M5 1219 aa16.94■□□□□ 0.3
CSNK1D-217ENST00000581241 DYNC1I1O14576 645 aa16.94■□□□□ 0.3
CSNK1D-217ENST00000581241 SMARCA5O60264 1052 aaPredicted RBP16.94■□□□□ 0.3
CSNK1D-217ENST00000581241 ATAD2Q6PL18 1390 aa16.94■□□□□ 0.3
CSNK1D-217ENST00000581241 ZNF530Q6P9A1 599 aaPredicted RBP16.94■□□□□ 0.3
CSNK1D-217ENST00000581241 DYDC1Q8WWB3 177 aa16.94■□□□□ 0.3
CSNK1D-217ENST00000581241 POLR3GO15318 223 aaPredicted RBP16.93■□□□□ 0.3
CSNK1D-217ENST00000581241 USP25Q9UHP3 1055 aa16.93■□□□□ 0.3
CSNK1D-217ENST00000581241 SSBP05455 408 aaKnown RBP eCLIP16.93■□□□□ 0.3
CSNK1D-217ENST00000581241 ESCO1Q5FWF5 840 aa16.93■□□□□ 0.3
CSNK1D-217ENST00000581241 TSG101Q99816 390 aa16.93■□□□□ 0.3
CSNK1D-217ENST00000581241 GLRX3O76003 335 aaKnown RBP16.93■□□□□ 0.3
CSNK1D-217ENST00000581241 RARSP54136 660 aaKnown RBP16.93■□□□□ 0.3
CSNK1D-217ENST00000581241 MAPK8IP2Q13387 824 aaPredicted RBP16.93■□□□□ 0.3
CSNK1D-217ENST00000581241 DDX19AQ9NUU7 478 aaKnown RBP16.93■□□□□ 0.3
CSNK1D-217ENST00000581241 FERMT3Q86UX7 667 aa16.92■□□□□ 0.3
CSNK1D-217ENST00000581241 U3KPZ7 1027 aaPredicted RBP16.92■□□□□ 0.3
CSNK1D-217ENST00000581241 SYNJ1O43426 1573 aa16.92■□□□□ 0.3
CSNK1D-217ENST00000581241 ADCY5O95622 1261 aa16.92■□□□□ 0.3
CSNK1D-217ENST00000581241 STX1AQ16623 288 aa16.92■□□□□ 0.3
CSNK1D-217ENST00000581241 PHAXQ9H814 394 aaKnown RBP16.92■□□□□ 0.3
CSNK1D-217ENST00000581241 ABCC11Q96J66 1382 aa16.92■□□□□ 0.3
CSNK1D-217ENST00000581241 HMGB1P09429 215 aaKnown RBP16.91■□□□□ 0.3
CSNK1D-217ENST00000581241 DESP17661 470 aa16.91■□□□□ 0.3
CSNK1D-217ENST00000581241 LRPPRCP42704 1394 aaKnown RBP16.91■□□□□ 0.3
CSNK1D-217ENST00000581241 C20orf194Q5TEA3 1177 aa16.91■□□□□ 0.3
CSNK1D-217ENST00000581241 PRIMPOLQ96LW4 560 aa16.91■□□□□ 0.3
CSNK1D-217ENST00000581241 C16orf45Q96MC5 204 aaPredicted RBP16.91■□□□□ 0.3
CSNK1D-217ENST00000581241 MPHOSPH8Q99549 860 aa16.91■□□□□ 0.3
CSNK1D-217ENST00000581241 EXOC6BQ9Y2D4 811 aa16.91■□□□□ 0.3
CSNK1D-217ENST00000581241 RAI14Q9P0K7 980 aa16.91■□□□□ 0.3
CSNK1D-217ENST00000581241 CEP126Q9P2H0 1117 aa16.9■□□□□ 0.3
CSNK1D-217ENST00000581241 DHX29Q7Z478 1369 aaKnown RBP16.9■□□□□ 0.3
CSNK1D-217ENST00000581241 GCOM1H8Y6P7 765 aaPredicted RBP16.9■□□□□ 0.3
CSNK1D-217ENST00000581241 MYZAPP0CAP1 466 aa16.9■□□□□ 0.3
CSNK1D-217ENST00000581241 CCDC178Q5BJE1 867 aa16.9■□□□□ 0.3
CSNK1D-217ENST00000581241 LIMCH1Q9UPQ0 1083 aa16.9■□□□□ 0.3
CSNK1D-217ENST00000581241 TRMT1Q9NXH9 659 aaKnown RBP16.9■□□□□ 0.3
CSNK1D-217ENST00000581241 PAXBP1Q9Y5B6 917 aa16.9■□□□□ 0.3
CSNK1D-217ENST00000581241 RNF187Q5TA31 235 aaPredicted RBP16.9■□□□□ 0.3
CSNK1D-217ENST00000581241 TXNDC2Q86VQ3 553 aa16.9■□□□□ 0.3
CSNK1D-217ENST00000581241 AIDAQ96BJ3 306 aa16.9■□□□□ 0.3
CSNK1D-217ENST00000581241 YEATS4O95619 227 aa16.89■□□□□ 0.29
CSNK1D-217ENST00000581241 CEP135Q66GS9 1140 aa16.89■□□□□ 0.29
CSNK1D-217ENST00000581241 GNAT3A8MTJ3 354 aa16.89■□□□□ 0.29
CSNK1D-217ENST00000581241 NUP88Q99567 741 aaPredicted RBP16.89■□□□□ 0.29
CSNK1D-217ENST00000581241 RPGRIP1LQ68CZ1 1315 aa16.89■□□□□ 0.29
CSNK1D-217ENST00000581241 GOLGA6L9A6NEM1 432 aa16.89■□□□□ 0.29
CSNK1D-217ENST00000581241 USO1O60763 962 aaKnown RBP16.89■□□□□ 0.29
CSNK1D-217ENST00000581241 IFFO1Q0D2I5 559 aa16.89■□□□□ 0.29
CSNK1D-217ENST00000581241 LUZP1Q86V48 1076 aa16.89■□□□□ 0.29
CSNK1D-217ENST00000581241 PPP1R12BO60237 982 aaPredicted RBP16.89■□□□□ 0.29
CSNK1D-217ENST00000581241 POTEJP0CG39 1038 aa16.89■□□□□ 0.29
CSNK1D-217ENST00000581241 GTF2F1P35269 517 aaKnown RBP eCLIP16.89■□□□□ 0.291e-7■■■■■ 38.7
CSNK1D-217ENST00000581241 C8orf76Q96K31 380 aa16.89■□□□□ 0.29
CSNK1D-217ENST00000581241 CCDC113Q9H0I3 377 aa16.89■□□□□ 0.29
CSNK1D-217ENST00000581241 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.88■□□□□ 0.292e-11■■■■■ 30.8
CSNK1D-217ENST00000581241 SNW1Q13573 536 aaKnown RBP16.88■□□□□ 0.29
CSNK1D-217ENST00000581241 TMC6Q7Z403 805 aa16.88■□□□□ 0.29
CSNK1D-217ENST00000581241 TMX1Q9H3N1 280 aa16.88■□□□□ 0.29
CSNK1D-217ENST00000581241 FGFR1OPO95684 399 aaKnown RBP16.88■□□□□ 0.29
CSNK1D-217ENST00000581241 ZSCAN23Q3MJ62 389 aa16.88■□□□□ 0.29
CSNK1D-217ENST00000581241 PAF1Q8N7H5 531 aa16.88■□□□□ 0.29
CSNK1D-217ENST00000581241 ZNF76P36508 570 aa16.88■□□□□ 0.29
CSNK1D-217ENST00000581241 BMS1Q14692 1282 aaKnown RBP16.88■□□□□ 0.29
CSNK1D-217ENST00000581241 CKAP2LQ8IYA6 745 aa16.88■□□□□ 0.29
CSNK1D-217ENST00000581241 GOPCQ9HD26 462 aa16.88■□□□□ 0.29
CSNK1D-217ENST00000581241 CETN2P41208 172 aa16.87■□□□□ 0.29
CSNK1D-217ENST00000581241 CACNA2D4Q7Z3S7 1137 aa16.87■□□□□ 0.29
CSNK1D-217ENST00000581241 CCDC150Q8NCX0 1101 aa16.87■□□□□ 0.29
CSNK1D-217ENST00000581241 SSR1P43307 286 aaKnown RBP16.87■□□□□ 0.29
CSNK1D-217ENST00000581241 RRS1Q15050 365 aaKnown RBP16.87■□□□□ 0.29
CSNK1D-217ENST00000581241 KLHL10Q6JEL2 608 aa16.87■□□□□ 0.29
CSNK1D-217ENST00000581241 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.87■□□□□ 0.292e-8■■□□□ 13.7
CSNK1D-217ENST00000581241 AQRO60306 1485 aaKnown RBP eCLIP16.87■□□□□ 0.291e-7■■■■■ 36.9
CSNK1D-217ENST00000581241 GJB2P29033 226 aa16.87■□□□□ 0.29
CSNK1D-217ENST00000581241 MATR3P43243 847 aaKnown RBP eCLIP16.87■□□□□ 0.291e-6■■□□□ 13.8
CSNK1D-217ENST00000581241 CTR9Q6PD62 1173 aa16.87■□□□□ 0.29
CSNK1D-217ENST00000581241 AKAP2Q9Y2D5 859 aa16.87■□□□□ 0.29
CSNK1D-217ENST00000581241 PAFAH1B1P43034 410 aa16.87■□□□□ 0.29
CSNK1D-217ENST00000581241 DUSP27Q5VZP5 1158 aa16.87■□□□□ 0.29
CSNK1D-217ENST00000581241 SKAP1Q86WV1 359 aa16.87■□□□□ 0.29
CSNK1D-217ENST00000581241 GOLGA6L10A0A0M3HER8 536 aa16.86■□□□□ 0.29
CSNK1D-217ENST00000581241 BAG4O95429 457 aaKnown RBP16.86■□□□□ 0.29
CSNK1D-217ENST00000581241 GRIN2BQ13224 1484 aa16.86■□□□□ 0.29
CSNK1D-217ENST00000581241 TICAM2Q86XR7 235 aa16.86■□□□□ 0.29
CSNK1D-217ENST00000581241 PIBF1Q8WXW3 757 aa16.86■□□□□ 0.29
CSNK1D-217ENST00000581241 BCCIPQ9P287 314 aaKnown RBP eCLIP16.86■□□□□ 0.298e-7■■□□□ 14.4
CSNK1D-217ENST00000581241 FSIP1Q8NA03 581 aa16.86■□□□□ 0.29
CSNK1D-217ENST00000581241 SMARCC1Q92922 1105 aaPredicted RBP16.86■□□□□ 0.29
CSNK1D-217ENST00000581241 CCDC171Q6TFL3 1326 aa16.86■□□□□ 0.29
CSNK1D-217ENST00000581241 SMC1AQ14683 1233 aaKnown RBP16.86■□□□□ 0.29
CSNK1D-217ENST00000581241 CNNM3Q8NE01 707 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms