RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 SAFB2Q14151 953 aaKnown RBP eCLIP8.82□□□□□ -1
CDH13-212ENST00000569144 ZBED2Q9BTP6 218 aa8.82□□□□□ -1
CDH13-212ENST00000569144 C14orf93Q9H972 538 aaKnown RBP8.82□□□□□ -1
CDH13-212ENST00000569144 USP35Q9P2H5 1018 aa8.82□□□□□ -1
CDH13-212ENST00000569144 EIF3AQ14152 1382 aaKnown RBP8.82□□□□□ -1
CDH13-212ENST00000569144 DLC1Q96QB1 1528 aa8.81□□□□□ -1
CDH13-212ENST00000569144 PLSCR1O15162 318 aa8.81□□□□□ -1
CDH13-212ENST00000569144 CHRNA2Q15822 529 aa8.81□□□□□ -1
CDH13-212ENST00000569144 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.81□□□□□ -1
CDH13-212ENST00000569144 MYOM1P52179 1685 aa8.81□□□□□ -1
CDH13-212ENST00000569144 RGPD3A6NKT7 1758 aaPredicted RBP8.81□□□□□ -1
CDH13-212ENST00000569144 RGPD4Q7Z3J3 1758 aa8.81□□□□□ -1
CDH13-212ENST00000569144 PRR36Q9H6K5 1346 aa8.8□□□□□ -1
CDH13-212ENST00000569144 UTRNP46939 3433 aa8.8□□□□□ -1
CDH13-212ENST00000569144 TULP4Q9NRJ4 1543 aa8.8□□□□□ -1
CDH13-212ENST00000569144 ZBTB7AO95365 584 aa8.8□□□□□ -1
CDH13-212ENST00000569144 PROX2Q3B8N5 592 aa8.8□□□□□ -1
CDH13-212ENST00000569144 ADGRD1Q6QNK2 874 aa8.8□□□□□ -1
CDH13-212ENST00000569144 GPIHBP1Q8IV16 184 aa8.8□□□□□ -1
CDH13-212ENST00000569144 TCP11L2Q8N4U5 519 aa8.8□□□□□ -1
CDH13-212ENST00000569144 SYT17Q9BSW7 474 aa8.8□□□□□ -1
CDH13-212ENST00000569144 NPDC1Q9NQX5 325 aaPredicted RBP8.8□□□□□ -1
CDH13-212ENST00000569144 THRAP3Q9Y2W1 955 aaKnown RBP8.8□□□□□ -1
CDH13-212ENST00000569144 PHRF1Q9P1Y6 1649 aaKnown RBP8.8□□□□□ -1
CDH13-212ENST00000569144 OVOS2A0A0G2JMS6 1433 aa8.8□□□□□ -1
CDH13-212ENST00000569144 OVOS2A0A0J9YW53 1432 aa8.8□□□□□ -1
CDH13-212ENST00000569144 OVOS2Q6IE36 1432 aa8.8□□□□□ -1
CDH13-212ENST00000569144 ATP7BP35670 1465 aa8.79□□□□□ -1
CDH13-212ENST00000569144 TK2O00142 265 aa8.79□□□□□ -1
CDH13-212ENST00000569144 EVA1CP58658 441 aa8.79□□□□□ -1
CDH13-212ENST00000569144 NGDNQ8NEJ9 315 aaKnown RBP8.79□□□□□ -1
CDH13-212ENST00000569144 FHDC1Q9C0D6 1143 aaPredicted RBP8.79□□□□□ -1
CDH13-212ENST00000569144 POGKQ9P215 609 aa8.79□□□□□ -1
CDH13-212ENST00000569144 VPS9D1Q9Y2B5 631 aa8.79□□□□□ -1
CDH13-212ENST00000569144 PARP4Q9UKK3 1724 aaKnown RBP8.78□□□□□ -1
CDH13-212ENST00000569144 GIGYF1O75420 1035 aaPredicted RBP8.78□□□□□ -1
CDH13-212ENST00000569144 FCHSD2O94868 740 aa8.78□□□□□ -1
CDH13-212ENST00000569144 ZC3H6P61129 1189 aaKnown RBP8.78□□□□□ -1
CDH13-212ENST00000569144 PTGDRQ13258 359 aa8.78□□□□□ -1
CDH13-212ENST00000569144 CFAP70Q5T0N1 1121 aa8.78□□□□□ -1
CDH13-212ENST00000569144 LARP1Q6PKG0 1096 aaKnown RBP8.78□□□□□ -1
CDH13-212ENST00000569144 SLC4A5Q9BY07 1137 aa8.78□□□□□ -1
CDH13-212ENST00000569144 PDGFDQ9GZP0 370 aaPredicted RBP8.78□□□□□ -1
CDH13-212ENST00000569144 TRIM6-TRIM34B2RNG4 842 aa8.77□□□□□ -1.01
CDH13-212ENST00000569144 PRSS12P56730 875 aa8.77□□□□□ -1.01
CDH13-212ENST00000569144 CDCA7LQ96GN5 454 aa8.77□□□□□ -1.01
CDH13-212ENST00000569144 HIRIP3Q9BW71 556 aaPredicted RBP8.77□□□□□ -1.01
CDH13-212ENST00000569144 PEAK1Q9H792 1746 aa8.77□□□□□ -1.01
CDH13-212ENST00000569144 CPDO75976 1380 aa8.76□□□□□ -1.01
CDH13-212ENST00000569144 MAP3K5Q99683 1374 aa8.76□□□□□ -1.01
CDH13-212ENST00000569144 LMO7Q8WWI1 1683 aa8.76□□□□□ -1.01
CDH13-212ENST00000569144 WASLO00401 505 aaPredicted RBP8.76□□□□□ -1.01
CDH13-212ENST00000569144 MTFR1LQ9H019 292 aa8.76□□□□□ -1.01
CDH13-212ENST00000569144 TSKSQ9UJT2 592 aa8.76□□□□□ -1.01
CDH13-212ENST00000569144 GPR37O15354 613 aa8.75□□□□□ -1.01
CDH13-212ENST00000569144 PADI6Q6TGC4 694 aa8.75□□□□□ -1.01
CDH13-212ENST00000569144 STK32BQ9NY57 414 aa8.75□□□□□ -1.01
CDH13-212ENST00000569144 KIAA1468Q9P260 1216 aa8.75□□□□□ -1.01
CDH13-212ENST00000569144 CHD4Q14839 1912 aa8.75□□□□□ -1.01
CDH13-212ENST00000569144 MINK1Q8N4C8 1332 aaPredicted RBP8.75□□□□□ -1.01
CDH13-212ENST00000569144 ADGRB1O14514 1584 aa8.74□□□□□ -1.01
CDH13-212ENST00000569144 BCL9O00512 1426 aa8.74□□□□□ -1.01
CDH13-212ENST00000569144 CRB1P82279 1406 aa8.74□□□□□ -1.01
CDH13-212ENST00000569144 SLC15A2Q16348 729 aa8.74□□□□□ -1.01
CDH13-212ENST00000569144 NUTM2GQ5VZR2 741 aa8.74□□□□□ -1.01
CDH13-212ENST00000569144 FAM198AQ9UFP1 575 aa8.74□□□□□ -1.01
CDH13-212ENST00000569144 COL5A2P05997 1499 aaPredicted RBP8.74□□□□□ -1.01
CDH13-212ENST00000569144 LRRC37A3O60309 1634 aa8.73□□□□□ -1.01
CDH13-212ENST00000569144 HRO43593 1189 aa8.73□□□□□ -1.01
CDH13-212ENST00000569144 HIC1Q14526 733 aa8.73□□□□□ -1.01
CDH13-212ENST00000569144 DDB1Q16531 1140 aa8.73□□□□□ -1.01
CDH13-212ENST00000569144 PTF1AQ7RTS3 328 aa8.73□□□□□ -1.01
CDH13-212ENST00000569144 SPNS2Q8IVW8 549 aa8.73□□□□□ -1.01
CDH13-212ENST00000569144 ARXQ96QS3 562 aa8.73□□□□□ -1.01
CDH13-212ENST00000569144 RBM27Q9P2N5 1060 aaKnown RBP8.73□□□□□ -1.01
CDH13-212ENST00000569144 RABGEF1Q9UJ41 708 aa8.73□□□□□ -1.01
CDH13-212ENST00000569144 TRAK1Q9UPV9 953 aa8.73□□□□□ -1.01
CDH13-212ENST00000569144 USP19O94966 1318 aa8.73□□□□□ -1.01
CDH13-212ENST00000569144 AATKQ6ZMQ8 1374 aa8.73□□□□□ -1.01
CDH13-212ENST00000569144 ITSN1Q15811 1721 aa8.72□□□□□ -1.01
CDH13-212ENST00000569144 GPR162Q16538 588 aa8.72□□□□□ -1.01
CDH13-212ENST00000569144 TXNRD1Q16881 649 aa8.72□□□□□ -1.01
CDH13-212ENST00000569144 PACS2Q86VP3 889 aa8.72□□□□□ -1.01
CDH13-212ENST00000569144 NUDT16Q96DE0 195 aaKnown RBP8.72□□□□□ -1.01
CDH13-212ENST00000569144 STAC3Q96MF2 364 aa8.72□□□□□ -1.01
CDH13-212ENST00000569144 SBF2Q86WG5 1849 aa8.72□□□□□ -1.01
CDH13-212ENST00000569144 POLR3AO14802 1390 aaPredicted RBP8.72□□□□□ -1.01
CDH13-212ENST00000569144 CEP350Q5VT06 3117 aa8.71□□□□□ -1.01
CDH13-212ENST00000569144 BHMG1C9JSJ3 638 aaPredicted RBP8.71□□□□□ -1.02
CDH13-212ENST00000569144 GNPATO15228 680 aa8.71□□□□□ -1.02
CDH13-212ENST00000569144 TTC13Q8NBP0 860 aa8.71□□□□□ -1.02
CDH13-212ENST00000569144 MPHOSPH9Q99550 1183 aa8.71□□□□□ -1.02
CDH13-212ENST00000569144 NBPF3Q9H094 633 aa8.71□□□□□ -1.02
CDH13-212ENST00000569144 GCP02774 474 aa8.7□□□□□ -1.02
CDH13-212ENST00000569144 FECHP22830 423 aa8.7□□□□□ -1.02
CDH13-212ENST00000569144 PPARGC1BQ86YN6 1023 aaKnown RBP8.7□□□□□ -1.02
CDH13-212ENST00000569144 ABTB2Q8N961 1025 aa8.7□□□□□ -1.02
CDH13-212ENST00000569144 MARCH10Q8NA82 808 aaPredicted RBP8.7□□□□□ -1.02
CDH13-212ENST00000569144 SHANK3Q9BYB0 1731 aa8.7□□□□□ -1.02
CDH13-212ENST00000569144 ACEP12821 1306 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms