RNA–Protein interactions for RNA: ENST00000568340.5

CDH11-214, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 514 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-214ENST00000568340 RCAN3Q9UKA8 241 aa13.46□□□□□ -0.25
CDH11-214ENST00000568340 HSP90AB1P08238 724 aaKnown RBP13.45□□□□□ -0.26
CDH11-214ENST00000568340 MEX3CQ5U5Q3 659 aaKnown RBP13.45□□□□□ -0.26
CDH11-214ENST00000568340 MARCH10Q8NA82 808 aaPredicted RBP13.45□□□□□ -0.26
CDH11-214ENST00000568340 C8orf58Q8NAV2 365 aa13.45□□□□□ -0.26
CDH11-214ENST00000568340 TRPC5Q9UL62 973 aaPredicted RBP13.45□□□□□ -0.26
CDH11-214ENST00000568340 C5P01031 1676 aa13.44□□□□□ -0.26
CDH11-214ENST00000568340 ITGB4P16144 1822 aa13.44□□□□□ -0.26
CDH11-214ENST00000568340 CICQ96RK0 1608 aaPredicted RBP13.44□□□□□ -0.26
CDH11-214ENST00000568340 KCNQ3O43525 872 aa13.44□□□□□ -0.26
CDH11-214ENST00000568340 VAMP4O75379 141 aa13.44□□□□□ -0.26
CDH11-214ENST00000568340 RARSP54136 660 aaKnown RBP13.44□□□□□ -0.26
CDH11-214ENST00000568340 FAM98CQ17RN3 349 aaKnown RBP13.44□□□□□ -0.26
CDH11-214ENST00000568340 UPF1Q92900 1129 aaKnown RBP eCLIP13.44□□□□□ -0.26
CDH11-214ENST00000568340 MIS18AQ9NYP9 233 aa13.44□□□□□ -0.26
CDH11-214ENST00000568340 ERVV-2B6SEH9 535 aa13.43□□□□□ -0.26
CDH11-214ENST00000568340 ZNF772Q68DY9 489 aaPredicted RBP13.43□□□□□ -0.26
CDH11-214ENST00000568340 TSPYL4Q9UJ04 414 aa13.43□□□□□ -0.26
CDH11-214ENST00000568340 BRPF1P55201 1214 aaPredicted RBP13.42□□□□□ -0.26
CDH11-214ENST00000568340 EIF4A1P60842 406 aaKnown RBP13.42□□□□□ -0.26
CDH11-214ENST00000568340 DDB1Q16531 1140 aa13.42□□□□□ -0.26
CDH11-214ENST00000568340 SUPT16HQ9Y5B9 1047 aaKnown RBP13.42□□□□□ -0.26
CDH11-214ENST00000568340 NHSQ6T4R5 1651 aa13.42□□□□□ -0.26
CDH11-214ENST00000568340 RGS12O14924 1447 aa13.41□□□□□ -0.26
CDH11-214ENST00000568340 LAMB4A4D0S4 1761 aa13.41□□□□□ -0.26
CDH11-214ENST00000568340 RRP1P56182 461 aaKnown RBP13.41□□□□□ -0.26
CDH11-214ENST00000568340 DDX54Q8TDD1 881 aaKnown RBP13.41□□□□□ -0.26
CDH11-214ENST00000568340 SOS1Q07889 1333 aaPredicted RBP13.4□□□□□ -0.26
CDH11-214ENST00000568340 EXOC5O00471 708 aa13.4□□□□□ -0.26
CDH11-214ENST00000568340 BCAR3O75815 825 aa13.4□□□□□ -0.26
CDH11-214ENST00000568340 TEFQ10587 303 aa13.4□□□□□ -0.26
CDH11-214ENST00000568340 TWISTNBQ3B726 338 aaPredicted RBP13.4□□□□□ -0.26
CDH11-214ENST00000568340 NFATC2IPQ8NCF5 419 aa13.4□□□□□ -0.26
CDH11-214ENST00000568340 SSH1Q8WYL5 1049 aa13.4□□□□□ -0.26
CDH11-214ENST00000568340 ZNF428Q96B54 188 aa13.4□□□□□ -0.26
CDH11-214ENST00000568340 LAS1LQ9Y4W2 734 aaKnown RBP13.4□□□□□ -0.26
CDH11-214ENST00000568340 BTBD11A6QL63 1104 aa13.39□□□□□ -0.27
CDH11-214ENST00000568340 ZNF790Q6PG37 636 aa13.39□□□□□ -0.27
CDH11-214ENST00000568340 CCDC9Q9Y3X0 531 aaKnown RBP13.39□□□□□ -0.27
CDH11-214ENST00000568340 BRWD3Q6RI45 1802 aa13.39□□□□□ -0.27
CDH11-214ENST00000568340 HOXB7P09629 217 aa13.38□□□□□ -0.27
CDH11-214ENST00000568340 ALDH1L2Q3SY69 923 aa13.38□□□□□ -0.27
CDH11-214ENST00000568340 QTRT2Q9H974 415 aaKnown RBP13.38□□□□□ -0.27
CDH11-214ENST00000568340 TJP1Q07157 1748 aa13.38□□□□□ -0.27
CDH11-214ENST00000568340 RXRBP28702 533 aa13.37□□□□□ -0.27
CDH11-214ENST00000568340 SLC39A6Q13433 755 aa13.37□□□□□ -0.27
CDH11-214ENST00000568340 MRPL50Q8N5N7 158 aaKnown RBP13.37□□□□□ -0.27
CDH11-214ENST00000568340 PIGBQ92521 554 aa13.37□□□□□ -0.27
CDH11-214ENST00000568340 ZNF496Q96IT1 587 aaPredicted RBP13.37□□□□□ -0.27
CDH11-214ENST00000568340 ZNF831Q5JPB2 1677 aa13.37□□□□□ -0.27
CDH11-214ENST00000568340 SBF2Q86WG5 1849 aa13.36□□□□□ -0.27
CDH11-214ENST00000568340 GIGYF1O75420 1035 aaPredicted RBP13.36□□□□□ -0.27
CDH11-214ENST00000568340 CABP4P57796 275 aa13.36□□□□□ -0.27
CDH11-214ENST00000568340 SEPT12Q8IYM1 358 aa13.36□□□□□ -0.27
CDH11-214ENST00000568340 RREB1Q92766 1687 aa13.35□□□□□ -0.27
CDH11-214ENST00000568340 PRAMEF22A3QJZ6 481 aa13.35□□□□□ -0.27
CDH11-214ENST00000568340 RBM6P78332 1123 aaKnown RBP13.35□□□□□ -0.27
CDH11-214ENST00000568340 LRP10Q7Z4F1 713 aa13.35□□□□□ -0.27
CDH11-214ENST00000568340 BCL2L13Q9BXK5 485 aa13.35□□□□□ -0.27
CDH11-214ENST00000568340 ATG3Q9NT62 314 aa13.35□□□□□ -0.27
CDH11-214ENST00000568340 ELL2O00472 640 aaPredicted RBP13.34□□□□□ -0.27
CDH11-214ENST00000568340 C20orf194Q5TEA3 1177 aa13.34□□□□□ -0.27
CDH11-214ENST00000568340 SLC4A9Q96Q91 983 aa13.34□□□□□ -0.27
CDH11-214ENST00000568340 TNNQ9UQP3 1299 aa13.34□□□□□ -0.27
CDH11-214ENST00000568340 N4BP2Q86UW6 1770 aaPredicted RBP13.33□□□□□ -0.28
CDH11-214ENST00000568340 PLIN1O60240 522 aa13.33□□□□□ -0.28
CDH11-214ENST00000568340 PTF1AQ7RTS3 328 aa13.33□□□□□ -0.28
CDH11-214ENST00000568340 TMOD3Q9NYL9 352 aa13.33□□□□□ -0.28
CDH11-214ENST00000568340 ASAP1Q9ULH1 1129 aa13.33□□□□□ -0.28
CDH11-214ENST00000568340 BTAF1O14981 1849 aa13.33□□□□□ -0.28
CDH11-214ENST00000568340 RLBP1P12271 317 aa13.32□□□□□ -0.28
CDH11-214ENST00000568340 PRIM1P49642 420 aaKnown RBP13.32□□□□□ -0.28
CDH11-214ENST00000568340 PDIA6Q15084 440 aa13.32□□□□□ -0.28
CDH11-214ENST00000568340 SMC4Q9NTJ3 1288 aa13.32□□□□□ -0.28
CDH11-214ENST00000568340 KIF16BQ96L93 1317 aa13.32□□□□□ -0.28
CDH11-214ENST00000568340 LY75O60449 1722 aa13.31□□□□□ -0.28
CDH11-214ENST00000568340 COL5A3P25940 1745 aaPredicted RBP13.31□□□□□ -0.28
CDH11-214ENST00000568340 KCNQ2O43526 872 aa13.31□□□□□ -0.28
CDH11-214ENST00000568340 TRIM27P14373 513 aa13.31□□□□□ -0.28
CDH11-214ENST00000568340 ABCC4O15439 1325 aa13.31□□□□□ -0.28
CDH11-214ENST00000568340 TCERG1O14776 1098 aaKnown RBP13.3□□□□□ -0.28
CDH11-214ENST00000568340 G2E3Q7L622 706 aa13.3□□□□□ -0.28
CDH11-214ENST00000568340 FMNL2Q96PY5 1086 aa13.3□□□□□ -0.28
CDH11-214ENST00000568340 PDE3AQ14432 1141 aa13.29□□□□□ -0.28
CDH11-214ENST00000568340 PROSER3Q2NL68 480 aa13.29□□□□□ -0.28
CDH11-214ENST00000568340 HDGFL1Q5TGJ6 251 aa13.29□□□□□ -0.28
CDH11-214ENST00000568340 VSIG10Q8N0Z9 540 aa13.29□□□□□ -0.28
CDH11-214ENST00000568340 ARHGAP45Q92619 1136 aa13.29□□□□□ -0.28
CDH11-214ENST00000568340 ACSBG1Q96GR2 724 aa13.29□□□□□ -0.28
CDH11-214ENST00000568340 NOB1Q9ULX3 412 aaKnown RBP13.29□□□□□ -0.28
CDH11-214ENST00000568340 GTF3C3Q9Y5Q9 886 aa13.29□□□□□ -0.28
CDH11-214ENST00000568340 PXDNLA1KZ92 1463 aa13.29□□□□□ -0.28
CDH11-214ENST00000568340 CACNA1FO60840 1977 aa13.29□□□□□ -0.28
CDH11-214ENST00000568340 TNS1Q9HBL0 1735 aaKnown RBP13.28□□□□□ -0.28
CDH11-214ENST00000568340 SNRPA1P09661 255 aaKnown RBP13.28□□□□□ -0.28
CDH11-214ENST00000568340 IRX6P78412 446 aaPredicted RBP13.28□□□□□ -0.28
CDH11-214ENST00000568340 FAM182BQ5T319 152 aa13.28□□□□□ -0.28
CDH11-214ENST00000568340 CCDC30Q5VVM6 783 aa13.28□□□□□ -0.28
CDH11-214ENST00000568340 ATF7IPQ6VMQ6 1270 aa13.28□□□□□ -0.28
CDH11-214ENST00000568340 CHPF2Q9P2E5 772 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms