RNA–Protein interactions for RNA: ENST00000539369.1

LDHC-206, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 881 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-206ENST00000539369 KRTAP9-6A0A140TA67 174 aa8.66□□□□□ -1.02
LDHC-206ENST00000539369 KRBA1A5PL33 1030 aa8.66□□□□□ -1.02
LDHC-206ENST00000539369 ERVH48-1M5A8F1 160 aa8.66□□□□□ -1.02
LDHC-206ENST00000539369 BAG6P46379 1132 aa8.66□□□□□ -1.02
LDHC-206ENST00000539369 RAB15P59190 212 aa8.66□□□□□ -1.02
LDHC-206ENST00000539369 PPP2R2DQ66LE6 453 aa8.66□□□□□ -1.02
LDHC-206ENST00000539369 ADAM32Q8TC27 787 aa8.66□□□□□ -1.02
LDHC-206ENST00000539369 SHROOM2Q13796 1616 aa8.65□□□□□ -1.02
LDHC-206ENST00000539369 ADAMTS12P58397 1594 aa8.65□□□□□ -1.02
LDHC-206ENST00000539369 RNF144AP50876 292 aaPredicted RBP8.65□□□□□ -1.02
LDHC-206ENST00000539369 FAM69CQ0P6D2 419 aa8.65□□□□□ -1.02
LDHC-206ENST00000539369 NR6A1Q15406 480 aa8.65□□□□□ -1.02
LDHC-206ENST00000539369 GMCL1Q96IK5 515 aa8.65□□□□□ -1.02
LDHC-206ENST00000539369 PSMG3-AS1Q96PY0 264 aa8.65□□□□□ -1.02
LDHC-206ENST00000539369 SNRPNP63162 240 aaKnown RBP8.64□□□□□ -1.03
LDHC-206ENST00000539369 GTPBP3Q969Y2 492 aaKnown RBP8.64□□□□□ -1.03
LDHC-206ENST00000539369 ABCC10Q5T3U5 1492 aa8.64□□□□□ -1.03
LDHC-206ENST00000539369 ZC3H4Q9UPT8 1303 aaKnown RBP8.63□□□□□ -1.03
LDHC-206ENST00000539369 LRRC4BQ9NT99 713 aa8.63□□□□□ -1.03
LDHC-206ENST00000539369 PRG4Q92954 1404 aaPredicted RBP8.63□□□□□ -1.03
LDHC-206ENST00000539369 AP1G2O75843 785 aa8.62□□□□□ -1.03
LDHC-206ENST00000539369 FURINP09958 794 aa8.62□□□□□ -1.03
LDHC-206ENST00000539369 NBPF20Q3BBV1 942 aa8.62□□□□□ -1.03
LDHC-206ENST00000539369 RIPOR1Q6ZS17 1223 aa8.62□□□□□ -1.03
LDHC-206ENST00000539369 FHAD1B1AJZ9 1412 aa8.62□□□□□ -1.03
LDHC-206ENST00000539369 ESPNB1AK53 854 aa8.61□□□□□ -1.03
LDHC-206ENST00000539369 OIP5O43482 229 aa8.61□□□□□ -1.03
LDHC-206ENST00000539369 COL8A1P27658 744 aa8.61□□□□□ -1.03
LDHC-206ENST00000539369 PTK2Q05397 1052 aa8.61□□□□□ -1.03
LDHC-206ENST00000539369 GPSM3Q9Y4H4 160 aa8.61□□□□□ -1.03
LDHC-206ENST00000539369 FOXR1Q6PIV2 292 aa8.6□□□□□ -1.03
LDHC-206ENST00000539369 CYLDQ9NQC7 956 aa8.6□□□□□ -1.03
LDHC-206ENST00000539369 DIP2BQ9P265 1576 aa8.6□□□□□ -1.03
LDHC-206ENST00000539369 MAPKBP1O60336 1514 aa8.59□□□□□ -1.03
LDHC-206ENST00000539369 SHISA8B8ZZ34 492 aa8.59□□□□□ -1.03
LDHC-206ENST00000539369 EPS8L1Q8TE68 723 aa8.59□□□□□ -1.03
LDHC-206ENST00000539369 DYRK1BQ9Y463 629 aa8.59□□□□□ -1.03
LDHC-206ENST00000539369 WRNQ14191 1432 aaPredicted RBP eCLIP8.59□□□□□ -1.03
LDHC-206ENST00000539369 KDM6BO15054 1643 aa8.58□□□□□ -1.04
LDHC-206ENST00000539369 USP17L8P0C7I0 530 aa8.58□□□□□ -1.04
LDHC-206ENST00000539369 MX2P20592 715 aa8.58□□□□□ -1.04
LDHC-206ENST00000539369 RFC5P40937 340 aa8.58□□□□□ -1.04
LDHC-206ENST00000539369 NEUROD2Q15784 382 aa8.58□□□□□ -1.04
LDHC-206ENST00000539369 C1orf229Q6ZS94 237 aaPredicted RBP8.58□□□□□ -1.04
LDHC-206ENST00000539369 HMX1Q9NP08 348 aaPredicted RBP8.58□□□□□ -1.04
LDHC-206ENST00000539369 POU4F2Q12837 409 aa8.57□□□□□ -1.04
LDHC-206ENST00000539369 GAS2L1Q99501 681 aaPredicted RBP8.57□□□□□ -1.04
LDHC-206ENST00000539369 GOPCQ9HD26 462 aa8.57□□□□□ -1.04
LDHC-206ENST00000539369 ADCY10Q96PN6 1610 aa8.56□□□□□ -1.04
LDHC-206ENST00000539369 THBS1P07996 1170 aa8.56□□□□□ -1.04
LDHC-206ENST00000539369 ERICH3Q5RHP9 1530 aa8.55□□□□□ -1.04
LDHC-206ENST00000539369 H7C1W4 665 aa8.55□□□□□ -1.04
LDHC-206ENST00000539369 ITGB7P26010 798 aa8.55□□□□□ -1.04
LDHC-206ENST00000539369 GPC1P35052 558 aa8.55□□□□□ -1.04
LDHC-206ENST00000539369 PCMTD1Q96MG8 357 aaPredicted RBP8.55□□□□□ -1.04
LDHC-206ENST00000539369 TRERF1Q96PN7 1200 aa8.55□□□□□ -1.04
LDHC-206ENST00000539369 OXCT2Q9BYC2 517 aaPredicted RBP8.55□□□□□ -1.04
LDHC-206ENST00000539369 ATP5J2-PTCD1G3V325 749 aa8.54□□□□□ -1.04
LDHC-206ENST00000539369 MEN1O00255 615 aa8.54□□□□□ -1.04
LDHC-206ENST00000539369 HOXB4P17483 251 aaPredicted RBP8.54□□□□□ -1.04
LDHC-206ENST00000539369 DZIP3Q86Y13 1208 aaKnown RBP8.54□□□□□ -1.04
LDHC-206ENST00000539369 IL27Q8NEV9 243 aa8.54□□□□□ -1.04
LDHC-206ENST00000539369 A0A1W2PRU2 124 aa8.53□□□□□ -1.04
LDHC-206ENST00000539369 PNMA1Q8ND90 353 aa8.53□□□□□ -1.04
LDHC-206ENST00000539369 MKL2Q9ULH7 1088 aa8.53□□□□□ -1.04
LDHC-206ENST00000539369 RUSC2Q8N2Y8 1516 aa8.53□□□□□ -1.04
LDHC-206ENST00000539369 ADGRL1O94910 1474 aa8.52□□□□□ -1.05
LDHC-206ENST00000539369 NBPF10Q6P3W6 841 aaKnown RBP8.52□□□□□ -1.05
LDHC-206ENST00000539369 NBPF15Q8N660 670 aa8.52□□□□□ -1.05
LDHC-206ENST00000539369 SUV39H2Q9H5I1 410 aa8.52□□□□□ -1.05
LDHC-206ENST00000539369 NSFL1CQ9UNZ2 370 aaKnown RBP8.52□□□□□ -1.05
LDHC-206ENST00000539369 TOP2BQ02880 1626 aa8.51□□□□□ -1.05
LDHC-206ENST00000539369 ALYREFQ86V81 257 aaKnown RBP8.51□□□□□ -1.05
LDHC-206ENST00000539369 KRTAP1-3Q8IUG1 177 aa8.51□□□□□ -1.05
LDHC-206ENST00000539369 SEPT12Q8IYM1 358 aa8.51□□□□□ -1.05
LDHC-206ENST00000539369 GRIP2Q9C0E4 1043 aa8.51□□□□□ -1.05
LDHC-206ENST00000539369 NUCKS1Q9H1E3 243 aaKnown RBP8.51□□□□□ -1.05
LDHC-206ENST00000539369 TSPOAP1O95153 1857 aa8.51□□□□□ -1.05
LDHC-206ENST00000539369 BIVM-ERCC5R4GMW8 1640 aa8.51□□□□□ -1.05
LDHC-206ENST00000539369 MAP2K3P46734 347 aa8.5□□□□□ -1.05
LDHC-206ENST00000539369 BRPF1P55201 1214 aaPredicted RBP8.5□□□□□ -1.05
LDHC-206ENST00000539369 LINC00114Q6XXX2 140 aa8.5□□□□□ -1.05
LDHC-206ENST00000539369 KLRG1Q96E93 195 aa8.5□□□□□ -1.05
LDHC-206ENST00000539369 HECW2Q9P2P5 1572 aa8.49□□□□□ -1.05
LDHC-206ENST00000539369 SPATA31C2B4DYI2 1134 aa8.49□□□□□ -1.05
LDHC-206ENST00000539369 TMEM259Q4ZIN3 620 aa8.49□□□□□ -1.05
LDHC-206ENST00000539369 TRIM34Q9BYJ4 488 aa8.49□□□□□ -1.05
LDHC-206ENST00000539369 F11P03951 625 aa8.48□□□□□ -1.05
LDHC-206ENST00000539369 GRIN2CQ14957 1233 aa8.48□□□□□ -1.05
LDHC-206ENST00000539369 SLC27A3Q5K4L6 730 aa8.48□□□□□ -1.05
LDHC-206ENST00000539369 COL17A1Q9UMD9 1497 aaPredicted RBP8.48□□□□□ -1.05
LDHC-206ENST00000539369 C1QTNF9BB2RNN3 333 aa8.47□□□□□ -1.05
LDHC-206ENST00000539369 GIGYF1O75420 1035 aaPredicted RBP8.47□□□□□ -1.05
LDHC-206ENST00000539369 UBAP2LQ14157 1087 aaKnown RBP8.47□□□□□ -1.05
LDHC-206ENST00000539369 CD163Q86VB7 1156 aa8.47□□□□□ -1.05
LDHC-206ENST00000539369 EDARADDQ8WWZ3 215 aa8.47□□□□□ -1.05
LDHC-206ENST00000539369 CFHR5Q9BXR6 569 aa8.47□□□□□ -1.05
LDHC-206ENST00000539369 RRAGCQ9HB90 399 aa8.47□□□□□ -1.05
LDHC-206ENST00000539369 KIAA0586Q9BVV6 1533 aa8.46□□□□□ -1.05
LDHC-206ENST00000539369 ERVK-9P63128 1117 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms