RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 ARFGAP3Q9NP61 516 aa9.17□□□□□ -0.94
CSRP1-218ENST00000533402 LUC7LQ9NQ29 371 aaKnown RBP9.17□□□□□ -0.94
CSRP1-218ENST00000533402 PDZRN3Q9UPQ7 1066 aa9.17□□□□□ -0.94
CSRP1-218ENST00000533402 TRMT1Q9NXH9 659 aaKnown RBP9.17□□□□□ -0.94
CSRP1-218ENST00000533402 ARHGEF12Q9NZN5 1544 aa9.17□□□□□ -0.94
CSRP1-218ENST00000533402 NUP153P49790 1475 aaKnown RBP9.17□□□□□ -0.94
CSRP1-218ENST00000533402 NEMFO60524 1076 aa9.16□□□□□ -0.94
CSRP1-218ENST00000533402 NEBLO76041 1014 aa9.16□□□□□ -0.94
CSRP1-218ENST00000533402 CLIP2Q9UDT6 1046 aa9.16□□□□□ -0.94
CSRP1-218ENST00000533402 CEP83Q9Y592 693 aa9.16□□□□□ -0.94
CSRP1-218ENST00000533402 NCOA1Q15788 1441 aa9.16□□□□□ -0.94
CSRP1-218ENST00000533402 ADCY5O95622 1261 aa9.16□□□□□ -0.94
CSRP1-218ENST00000533402 SAFBQ15424 915 aaKnown RBP eCLIP9.16□□□□□ -0.94
CSRP1-218ENST00000533402 UPF3BQ9BZI7 483 aaKnown RBP9.16□□□□□ -0.94
CSRP1-218ENST00000533402 RRAGDQ9NQL2 400 aaPredicted RBP9.16□□□□□ -0.94
CSRP1-218ENST00000533402 CEP170Q5SW79 1584 aa9.16□□□□□ -0.94
CSRP1-218ENST00000533402 ATAD2Q6PL18 1390 aa9.16□□□□□ -0.94
CSRP1-218ENST00000533402 GABPB1Q06547 395 aaPredicted RBP9.16□□□□□ -0.94
CSRP1-218ENST00000533402 ZKSCAN5Q9Y2L8 839 aa9.16□□□□□ -0.94
CSRP1-218ENST00000533402 EBAG9O00559 213 aa9.16□□□□□ -0.94
CSRP1-218ENST00000533402 KIF5CO60282 957 aa9.16□□□□□ -0.94
CSRP1-218ENST00000533402 PIP4K2AP48426 406 aaPredicted RBP9.16□□□□□ -0.94
CSRP1-218ENST00000533402 SMG6Q86US8 1419 aaKnown RBP9.16□□□□□ -0.94
CSRP1-218ENST00000533402 ZNF396Q96N95 335 aaPredicted RBP9.16□□□□□ -0.94
CSRP1-218ENST00000533402 EPB41L2O43491 1005 aaKnown RBP9.16□□□□□ -0.94
CSRP1-218ENST00000533402 CCDC183Q5T5S1 534 aa9.16□□□□□ -0.94
CSRP1-218ENST00000533402 SCLT1Q96NL6 688 aa9.16□□□□□ -0.94
CSRP1-218ENST00000533402 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.16□□□□□ -0.94
CSRP1-218ENST00000533402 SPECC1LQ69YQ0 1117 aa9.16□□□□□ -0.94
CSRP1-218ENST00000533402 FAM114A1Q8IWE2 563 aa9.16□□□□□ -0.94
CSRP1-218ENST00000533402 RAD21O60216 631 aa9.15□□□□□ -0.94
CSRP1-218ENST00000533402 MSL1Q68DK7 614 aa9.15□□□□□ -0.94
CSRP1-218ENST00000533402 RNF168Q8IYW5 571 aaPredicted RBP9.15□□□□□ -0.94
CSRP1-218ENST00000533402 MAGEC2Q9UBF1 373 aaPredicted RBP9.15□□□□□ -0.94
CSRP1-218ENST00000533402 ZBTB12Q9Y330 459 aaPredicted RBP9.15□□□□□ -0.94
CSRP1-218ENST00000533402 APAF1O14727 1248 aa9.15□□□□□ -0.94
CSRP1-218ENST00000533402 CEBPZQ03701 1054 aaKnown RBP9.15□□□□□ -0.94
CSRP1-218ENST00000533402 DAAM2Q86T65 1068 aa9.15□□□□□ -0.94
CSRP1-218ENST00000533402 DHX16O60231 1041 aaKnown RBP9.15□□□□□ -0.94
CSRP1-218ENST00000533402 AP1ARQ63HQ0 302 aa9.15□□□□□ -0.94
CSRP1-218ENST00000533402 ZNF397Q8NF99 534 aaPredicted RBP9.15□□□□□ -0.94
CSRP1-218ENST00000533402 GIGYF2Q6Y7W6 1299 aaKnown RBP9.15□□□□□ -0.94
CSRP1-218ENST00000533402 CCDC7Q96M83 1385 aa9.15□□□□□ -0.94
CSRP1-218ENST00000533402 MAPKBP1O60336 1514 aa9.15□□□□□ -0.94
CSRP1-218ENST00000533402 KIF4BQ2VIQ3 1234 aa9.15□□□□□ -0.94
CSRP1-218ENST00000533402 FMNL3Q8IVF7 1028 aa9.15□□□□□ -0.94
CSRP1-218ENST00000533402 PPM1EQ8WY54 764 aa9.15□□□□□ -0.94
CSRP1-218ENST00000533402 ARAP3Q8WWN8 1544 aa9.15□□□□□ -0.95
CSRP1-218ENST00000533402 ERICH2A1L162 156 aa9.15□□□□□ -0.95
CSRP1-218ENST00000533402 PSMA5P28066 241 aa9.15□□□□□ -0.95
CSRP1-218ENST00000533402 MAP3K9P80192 1104 aa9.15□□□□□ -0.95
CSRP1-218ENST00000533402 SMC1AQ14683 1233 aaKnown RBP9.15□□□□□ -0.95
CSRP1-218ENST00000533402 CERS3Q8IU89 383 aa9.15□□□□□ -0.95
CSRP1-218ENST00000533402 OTUD6BQ8N6M0 293 aa9.15□□□□□ -0.95
CSRP1-218ENST00000533402 BCCIPQ9P287 314 aaKnown RBP eCLIP9.15□□□□□ -0.95
CSRP1-218ENST00000533402 CLNS1AP54105 237 aaKnown RBP9.15□□□□□ -0.95
CSRP1-218ENST00000533402 HS1BP3Q53T59 392 aa9.15□□□□□ -0.95
CSRP1-218ENST00000533402 ZFYVE27Q5T4F4 411 aa9.15□□□□□ -0.95
CSRP1-218ENST00000533402 GOLGA6L9A6NEM1 432 aa9.14□□□□□ -0.95
CSRP1-218ENST00000533402 SNW1Q13573 536 aaKnown RBP9.14□□□□□ -0.95
CSRP1-218ENST00000533402 TNPO1Q92973 898 aaKnown RBP9.14□□□□□ -0.95
CSRP1-218ENST00000533402 RPAINQ86UA6 219 aa9.14□□□□□ -0.95
CSRP1-218ENST00000533402 ASXL2Q76L83 1435 aa9.14□□□□□ -0.95
CSRP1-218ENST00000533402 KIF5BP33176 963 aa9.14□□□□□ -0.95
CSRP1-218ENST00000533402 DACH1Q9UI36 760 aa9.14□□□□□ -0.95
CSRP1-218ENST00000533402 V9GYY5 206 aaPredicted RBP9.14□□□□□ -0.95
CSRP1-218ENST00000533402 SLC3A2P08195 630 aaKnown RBP9.14□□□□□ -0.95
CSRP1-218ENST00000533402 ATP6V1AP38606 617 aa9.14□□□□□ -0.95
CSRP1-218ENST00000533402 ATP10BO94823 1461 aa9.14□□□□□ -0.95
CSRP1-218ENST00000533402 SMTNL1A8MU46 457 aa9.13□□□□□ -0.95
CSRP1-218ENST00000533402 ERC1Q8IUD2 1116 aa9.13□□□□□ -0.95
CSRP1-218ENST00000533402 ABCC5O15440 1437 aa9.13□□□□□ -0.95
CSRP1-218ENST00000533402 CCDC113Q9H0I3 377 aa9.13□□□□□ -0.95
CSRP1-218ENST00000533402 ELL2O00472 640 aaPredicted RBP9.13□□□□□ -0.95
CSRP1-218ENST00000533402 TXLNAP40222 546 aa9.13□□□□□ -0.95
CSRP1-218ENST00000533402 BRD4O60885 1362 aaPredicted RBP9.13□□□□□ -0.95
CSRP1-218ENST00000533402 CCDC160A6NGH7 325 aa9.13□□□□□ -0.95
CSRP1-218ENST00000533402 ME1P48163 572 aa9.13□□□□□ -0.95
CSRP1-218ENST00000533402 CFAP100Q494V2 611 aa9.13□□□□□ -0.95
CSRP1-218ENST00000533402 DZIP1Q86YF9 867 aaKnown RBP9.13□□□□□ -0.95
CSRP1-218ENST00000533402 KDM5BQ9UGL1 1544 aa9.13□□□□□ -0.95
CSRP1-218ENST00000533402 ATP2C2O75185 946 aa9.13□□□□□ -0.95
CSRP1-218ENST00000533402 MCM6Q14566 821 aa9.13□□□□□ -0.95
CSRP1-218ENST00000533402 STK38Q15208 465 aa9.13□□□□□ -0.95
CSRP1-218ENST00000533402 TRDNQ13061 729 aa9.13□□□□□ -0.95
CSRP1-218ENST00000533402 WDR63Q8IWG1 891 aa9.13□□□□□ -0.95
CSRP1-218ENST00000533402 HYPKQ9NX55 129 aa9.13□□□□□ -0.95
CSRP1-218ENST00000533402 CCDC171Q6TFL3 1326 aa9.12□□□□□ -0.95
CSRP1-218ENST00000533402 ZNF692Q9BU19 519 aaPredicted RBP9.12□□□□□ -0.95
CSRP1-218ENST00000533402 SPATA32Q96LK8 384 aa9.12□□□□□ -0.95
CSRP1-218ENST00000533402 RAI14Q9P0K7 980 aa9.12□□□□□ -0.95
CSRP1-218ENST00000533402 IFFO1Q0D2I5 559 aa9.12□□□□□ -0.95
CSRP1-218ENST00000533402 TMEM87AQ8NBN3 555 aa9.12□□□□□ -0.95
CSRP1-218ENST00000533402 TCHPQ9BT92 498 aa9.12□□□□□ -0.95
CSRP1-218ENST00000533402 PANK3Q9H999 370 aa9.12□□□□□ -0.95
CSRP1-218ENST00000533402 DHX29Q7Z478 1369 aaKnown RBP9.12□□□□□ -0.95
CSRP1-218ENST00000533402 ADGRL2O95490 1459 aa9.12□□□□□ -0.95
CSRP1-218ENST00000533402 GSDMDP57764 484 aa9.12□□□□□ -0.95
CSRP1-218ENST00000533402 CAMK4Q16566 473 aa9.12□□□□□ -0.95
CSRP1-218ENST00000533402 LTV1Q96GA3 475 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms