RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 EIF3JO75822 258 aaKnown RBP8.34□□□□□ -1.07
CHD1-208ENST00000512392 OS9Q13438 667 aaPredicted RBP8.34□□□□□ -1.07
CHD1-208ENST00000512392 PRR12Q9ULL5 1215 aa8.34□□□□□ -1.07
CHD1-208ENST00000512392 NOVA2Q9UNW9 492 aaKnown RBP8.34□□□□□ -1.07
CHD1-208ENST00000512392 TSHZ1Q6ZSZ6 1077 aa8.33□□□□□ -1.08
CHD1-208ENST00000512392 CCDC146Q8IYE0 955 aa8.33□□□□□ -1.08
CHD1-208ENST00000512392 MAP10Q9P2G4 905 aa8.33□□□□□ -1.08
CHD1-208ENST00000512392 TNNI2P48788 182 aa8.33□□□□□ -1.08
CHD1-208ENST00000512392 FAM69CQ0P6D2 419 aa8.33□□□□□ -1.08
CHD1-208ENST00000512392 NR6A1Q15406 480 aa8.33□□□□□ -1.08
CHD1-208ENST00000512392 PTCRAQ6ISU1 281 aaPredicted RBP8.33□□□□□ -1.08
CHD1-208ENST00000512392 ZNF746Q6NUN9 644 aaPredicted RBP8.33□□□□□ -1.08
CHD1-208ENST00000512392 CLEC4GQ6UXB4 293 aa8.33□□□□□ -1.08
CHD1-208ENST00000512392 TRIM34Q9BYJ4 488 aa8.33□□□□□ -1.08
CHD1-208ENST00000512392 PCDH12Q9NPG4 1184 aa8.33□□□□□ -1.08
CHD1-208ENST00000512392 IFT57Q9NWB7 429 aa8.33□□□□□ -1.08
CHD1-208ENST00000512392 MRPL42Q9Y6G3 142 aaKnown RBP8.33□□□□□ -1.08
CHD1-208ENST00000512392 ZBTB24O43167 697 aaPredicted RBP8.32□□□□□ -1.08
CHD1-208ENST00000512392 RPIAP49247 311 aa8.32□□□□□ -1.08
CHD1-208ENST00000512392 PLA2G2CQ5R387 149 aa8.32□□□□□ -1.08
CHD1-208ENST00000512392 CAPN10Q9HC96 672 aa8.32□□□□□ -1.08
CHD1-208ENST00000512392 PNMA1Q8ND90 353 aa8.31□□□□□ -1.08
CHD1-208ENST00000512392 ARMC2Q8NEN0 867 aa8.31□□□□□ -1.08
CHD1-208ENST00000512392 MCCP23508 829 aa8.31□□□□□ -1.08
CHD1-208ENST00000512392 RBL2Q08999 1139 aa8.31□□□□□ -1.08
CHD1-208ENST00000512392 BRINP2Q9C0B6 783 aa8.31□□□□□ -1.08
CHD1-208ENST00000512392 UNC93B1Q9H1C4 597 aa8.31□□□□□ -1.08
CHD1-208ENST00000512392 RHBDL3P58872 404 aa8.3□□□□□ -1.08
CHD1-208ENST00000512392 KRBA2Q6ZNG9 492 aa8.3□□□□□ -1.08
CHD1-208ENST00000512392 C11orf96Q7Z7L8 435 aa8.3□□□□□ -1.08
CHD1-208ENST00000512392 SLC43A3Q8NBI5 491 aa8.3□□□□□ -1.08
CHD1-208ENST00000512392 EPS8L1Q8TE68 723 aa8.3□□□□□ -1.08
CHD1-208ENST00000512392 MTA3Q9BTC8 594 aa8.3□□□□□ -1.08
CHD1-208ENST00000512392 ACBD3Q9H3P7 528 aa8.3□□□□□ -1.08
CHD1-208ENST00000512392 TBX4P57082 545 aa8.3□□□□□ -1.08
CHD1-208ENST00000512392 ATP9BO43861 1147 aa8.29□□□□□ -1.08
CHD1-208ENST00000512392 CD2BP2O95400 341 aaKnown RBP8.29□□□□□ -1.08
CHD1-208ENST00000512392 DNAJA1P31689 397 aaKnown RBP8.29□□□□□ -1.08
CHD1-208ENST00000512392 SLC19A1P41440 591 aa8.29□□□□□ -1.08
CHD1-208ENST00000512392 C4orf46Q504U0 113 aa8.29□□□□□ -1.08
CHD1-208ENST00000512392 LIAT1Q6ZQX7 453 aa8.29□□□□□ -1.08
CHD1-208ENST00000512392 FILIP1Q7Z7B0 1213 aa8.29□□□□□ -1.08
CHD1-208ENST00000512392 FMNL3Q8IVF7 1028 aa8.29□□□□□ -1.08
CHD1-208ENST00000512392 RGS20O76081 388 aa8.28□□□□□ -1.08
CHD1-208ENST00000512392 GPKOWQ92917 476 aaPredicted RBP eCLIP8.28□□□□□ -1.08
CHD1-208ENST00000512392 EMID1Q96A84 441 aaPredicted RBP8.28□□□□□ -1.08
CHD1-208ENST00000512392 FKBPLQ9UIM3 349 aa8.28□□□□□ -1.08
CHD1-208ENST00000512392 HMGB1P1B2RPK0 211 aaPredicted RBP8.28□□□□□ -1.08
CHD1-208ENST00000512392 KIF4AO95239 1232 aa8.28□□□□□ -1.08
CHD1-208ENST00000512392 BIRC2Q13490 618 aa8.28□□□□□ -1.08
CHD1-208ENST00000512392 RPS6KC1Q96S38 1066 aa8.28□□□□□ -1.08
CHD1-208ENST00000512392 ANO2Q9NQ90 1003 aa8.28□□□□□ -1.08
CHD1-208ENST00000512392 GNL3LQ9NVN8 582 aaKnown RBP8.28□□□□□ -1.08
CHD1-208ENST00000512392 HSD3B2P26439 372 aa8.27□□□□□ -1.09
CHD1-208ENST00000512392 TRIM32Q13049 653 aa8.27□□□□□ -1.09
CHD1-208ENST00000512392 RNF187Q5TA31 235 aaPredicted RBP8.27□□□□□ -1.09
CHD1-208ENST00000512392 ZCRB1Q8TBF4 217 aaKnown RBP8.27□□□□□ -1.09
CHD1-208ENST00000512392 FAM161BQ96MY7 647 aa8.27□□□□□ -1.09
CHD1-208ENST00000512392 ASB16Q96NS5 453 aa8.27□□□□□ -1.09
CHD1-208ENST00000512392 DDX56Q9NY93 547 aaKnown RBP8.27□□□□□ -1.09
CHD1-208ENST00000512392 V9GY48 417 aaPredicted RBP8.27□□□□□ -1.09
CHD1-208ENST00000512392 MAPK1P28482 360 aa8.26□□□□□ -1.09
CHD1-208ENST00000512392 EVA1CP58658 441 aa8.26□□□□□ -1.09
CHD1-208ENST00000512392 NBPF14Q5TI25 921 aa8.26□□□□□ -1.09
CHD1-208ENST00000512392 CRTC2Q53ET0 693 aaPredicted RBP8.26□□□□□ -1.09
CHD1-208ENST00000512392 TMEM87AQ8NBN3 555 aa8.26□□□□□ -1.09
CHD1-208ENST00000512392 BAP1Q92560 729 aa8.26□□□□□ -1.09
CHD1-208ENST00000512392 ARMC5Q96C12 935 aa8.26□□□□□ -1.09
CHD1-208ENST00000512392 GMLQ99445 158 aa8.26□□□□□ -1.09
CHD1-208ENST00000512392 PRKD2Q9BZL6 878 aa8.26□□□□□ -1.09
CHD1-208ENST00000512392 NLRP2Q9NX02 1062 aa8.26□□□□□ -1.09
CHD1-208ENST00000512392 WDHD1O75717 1129 aaPredicted RBP8.25□□□□□ -1.09
CHD1-208ENST00000512392 ATP2B4P23634 1241 aa8.25□□□□□ -1.09
CHD1-208ENST00000512392 WNT7BP56706 349 aa8.25□□□□□ -1.09
CHD1-208ENST00000512392 SLFNL1Q499Z3 407 aa8.25□□□□□ -1.09
CHD1-208ENST00000512392 EAPPQ56P03 285 aaPredicted RBP8.25□□□□□ -1.09
CHD1-208ENST00000512392 CCDC189A1A4V9 331 aa8.24□□□□□ -1.09
CHD1-208ENST00000512392 PIK3CDO00329 1044 aa8.24□□□□□ -1.09
CHD1-208ENST00000512392 ZNF211Q13398 564 aaPredicted RBP8.24□□□□□ -1.09
CHD1-208ENST00000512392 ECM1Q16610 540 aa8.24□□□□□ -1.09
CHD1-208ENST00000512392 SPRYD7Q5W111 196 aa8.24□□□□□ -1.09
CHD1-208ENST00000512392 PDXDC2PQ6P474 469 aa8.24□□□□□ -1.09
CHD1-208ENST00000512392 OSBPL2Q9H1P3 480 aa8.24□□□□□ -1.09
CHD1-208ENST00000512392 CCER2I3L3R5 266 aa8.24□□□□□ -1.09
CHD1-208ENST00000512392 LZTS3O60299 673 aaPredicted RBP8.24□□□□□ -1.09
CHD1-208ENST00000512392 S100BP04271 92 aaPredicted RBP8.24□□□□□ -1.09
CHD1-208ENST00000512392 GYS2P54840 703 aa8.24□□□□□ -1.09
CHD1-208ENST00000512392 FANCCQ00597 558 aa8.24□□□□□ -1.09
CHD1-208ENST00000512392 ZNF511Q8NB15 262 aa8.24□□□□□ -1.09
CHD1-208ENST00000512392 CLP1Q92989 425 aaKnown RBP8.24□□□□□ -1.09
CHD1-208ENST00000512392 TGIF2Q9GZN2 237 aa8.24□□□□□ -1.09
CHD1-208ENST00000512392 ABL1P00519 1130 aa8.23□□□□□ -1.09
CHD1-208ENST00000512392 SH3BP2P78314 561 aa8.23□□□□□ -1.09
CHD1-208ENST00000512392 SEMA3FQ13275 785 aa8.23□□□□□ -1.09
CHD1-208ENST00000512392 CCSER2Q9H7U1 834 aa8.23□□□□□ -1.09
CHD1-208ENST00000512392 RNF19AQ9NV58 838 aa8.23□□□□□ -1.09
CHD1-208ENST00000512392 GPSM3Q9Y4H4 160 aa8.23□□□□□ -1.09
CHD1-208ENST00000512392 H3BRB1 525 aa8.22□□□□□ -1.09
CHD1-208ENST00000512392 LINC01559Q495D7 138 aa8.22□□□□□ -1.09
CHD1-208ENST00000512392 ZNF598Q86UK7 904 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms