RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 CCDC102AQ96A19 550 aa6.34□□□□□ -1.39
TRAPPC11-208ENST00000511955 TPX2Q9ULW0 747 aaKnown RBP6.34□□□□□ -1.39
TRAPPC11-208ENST00000511955 CLEC11AQ9Y240 323 aa6.34□□□□□ -1.39
TRAPPC11-208ENST00000511955 TONSLQ96HA7 1378 aa6.34□□□□□ -1.4
TRAPPC11-208ENST00000511955 TTLL12Q14166 644 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC11-208ENST00000511955 CSPP1Q1MSJ5 1256 aa6.33□□□□□ -1.4
TRAPPC11-208ENST00000511955 NBPF20Q3BBV1 942 aa6.33□□□□□ -1.4
TRAPPC11-208ENST00000511955 CCDC144BQ3MJ40 725 aa6.33□□□□□ -1.4
TRAPPC11-208ENST00000511955 DHX38Q92620 1227 aaKnown RBP6.33□□□□□ -1.4
TRAPPC11-208ENST00000511955 NOP58Q9Y2X3 529 aaKnown RBP6.33□□□□□ -1.4
TRAPPC11-208ENST00000511955 PLEKHG1Q9ULL1 1385 aa6.33□□□□□ -1.4
TRAPPC11-208ENST00000511955 ZRANB2O95218 330 aaKnown RBP eCLIP6.33□□□□□ -1.4
TRAPPC11-208ENST00000511955 PRR29P0C7W0 189 aa6.33□□□□□ -1.4
TRAPPC11-208ENST00000511955 KCNA6P17658 529 aa6.33□□□□□ -1.4
TRAPPC11-208ENST00000511955 TBX4P57082 545 aa6.33□□□□□ -1.4
TRAPPC11-208ENST00000511955 PDAP1Q13442 181 aaKnown RBP6.33□□□□□ -1.4
TRAPPC11-208ENST00000511955 SAFB2Q14151 953 aaKnown RBP eCLIP6.33□□□□□ -1.4
TRAPPC11-208ENST00000511955 TSNAXIP1Q2TAA8 658 aa6.33□□□□□ -1.4
TRAPPC11-208ENST00000511955 CCDC184Q52MB2 194 aa6.33□□□□□ -1.4
TRAPPC11-208ENST00000511955 CCAR1Q8IX12 1150 aaKnown RBP6.33□□□□□ -1.4
TRAPPC11-208ENST00000511955 GDPD2Q9HCC8 539 aa6.33□□□□□ -1.4
TRAPPC11-208ENST00000511955 NUB1Q9Y5A7 615 aa6.33□□□□□ -1.4
TRAPPC11-208ENST00000511955 KAT6BQ8WYB5 2073 aa6.33□□□□□ -1.4
TRAPPC11-208ENST00000511955 METP08581 1390 aa6.33□□□□□ -1.4
TRAPPC11-208ENST00000511955 EVA1CP58658 441 aa6.32□□□□□ -1.4
TRAPPC11-208ENST00000511955 PPP4CP60510 307 aa6.32□□□□□ -1.4
TRAPPC11-208ENST00000511955 C9orf131Q5VYM1 1079 aa6.32□□□□□ -1.4
TRAPPC11-208ENST00000511955 NPAS4Q8IUM7 802 aa6.32□□□□□ -1.4
TRAPPC11-208ENST00000511955 PIF1Q9H611 641 aa6.32□□□□□ -1.4
TRAPPC11-208ENST00000511955 JADE2Q9NQC1 790 aa6.32□□□□□ -1.4
TRAPPC11-208ENST00000511955 SNRKQ9NRH2 765 aa6.32□□□□□ -1.4
TRAPPC11-208ENST00000511955 NRBP1Q9UHY1 535 aa6.32□□□□□ -1.4
TRAPPC11-208ENST00000511955 IQSEC3Q9UPP2 1182 aaPredicted RBP6.32□□□□□ -1.4
TRAPPC11-208ENST00000511955 GNEQ9Y223 722 aaKnown RBP6.32□□□□□ -1.4
TRAPPC11-208ENST00000511955 KDM5AP29375 1690 aaKnown RBP6.32□□□□□ -1.4
TRAPPC11-208ENST00000511955 MED14O60244 1454 aa6.32□□□□□ -1.4
TRAPPC11-208ENST00000511955 PDE6BP35913 854 aa6.32□□□□□ -1.4
TRAPPC11-208ENST00000511955 TAGLNQ01995 201 aaKnown RBP6.32□□□□□ -1.4
TRAPPC11-208ENST00000511955 TCEAL1Q15170 157 aa6.32□□□□□ -1.4
TRAPPC11-208ENST00000511955 ADAMTS13Q76LX8 1427 aa6.31□□□□□ -1.4
TRAPPC11-208ENST00000511955 CFAP69A5D8W1 941 aa6.31□□□□□ -1.4
TRAPPC11-208ENST00000511955 TMEM88BA6NKF7 163 aa6.31□□□□□ -1.4
TRAPPC11-208ENST00000511955 MS4A1P11836 297 aa6.31□□□□□ -1.4
TRAPPC11-208ENST00000511955 SCP2P22307 547 aa6.31□□□□□ -1.4
TRAPPC11-208ENST00000511955 AMHR2Q16671 573 aa6.31□□□□□ -1.4
TRAPPC11-208ENST00000511955 MAP3K20Q9NYL2 800 aaKnown RBP6.31□□□□□ -1.4
TRAPPC11-208ENST00000511955 SPDYE5A6NIY4 337 aa6.31□□□□□ -1.4
TRAPPC11-208ENST00000511955 COPB2P35606 906 aa6.31□□□□□ -1.4
TRAPPC11-208ENST00000511955 PIP4K2BP78356 416 aa6.31□□□□□ -1.4
TRAPPC11-208ENST00000511955 SEMA3FQ13275 785 aa6.31□□□□□ -1.4
TRAPPC11-208ENST00000511955 HDAC1Q13547 482 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC11-208ENST00000511955 TRAK1Q9UPV9 953 aa6.31□□□□□ -1.4
TRAPPC11-208ENST00000511955 TBX22Q9Y458 520 aa6.31□□□□□ -1.4
TRAPPC11-208ENST00000511955 CTDP1Q9Y5B0 961 aaPredicted RBP6.31□□□□□ -1.4
TRAPPC11-208ENST00000511955 PPLO60437 1756 aa6.3□□□□□ -1.4
TRAPPC11-208ENST00000511955 NUTM2FA1L443 756 aa6.3□□□□□ -1.4
TRAPPC11-208ENST00000511955 PLEKHG6Q3KR16 790 aa6.3□□□□□ -1.4
TRAPPC11-208ENST00000511955 DDX46Q7L014 1031 aaKnown RBP6.3□□□□□ -1.4
TRAPPC11-208ENST00000511955 WAPLQ7Z5K2 1190 aa6.3□□□□□ -1.4
TRAPPC11-208ENST00000511955 HELBQ8NG08 1087 aaPredicted RBP6.3□□□□□ -1.4
TRAPPC11-208ENST00000511955 CERKQ8TCT0 537 aa6.3□□□□□ -1.4
TRAPPC11-208ENST00000511955 SENP7Q9BQF6 1050 aa6.3□□□□□ -1.4
TRAPPC11-208ENST00000511955 SWAP70Q9UH65 585 aa6.3□□□□□ -1.4
TRAPPC11-208ENST00000511955 MPNDQ8N594 471 aa6.3□□□□□ -1.4
TRAPPC11-208ENST00000511955 OTUD6BQ8N6M0 293 aa6.3□□□□□ -1.4
TRAPPC11-208ENST00000511955 SCYL1Q96KG9 808 aa6.3□□□□□ -1.4
TRAPPC11-208ENST00000511955 IRF2BPLQ9H1B7 796 aa6.3□□□□□ -1.4
TRAPPC11-208ENST00000511955 PTPRUQ92729 1446 aa6.3□□□□□ -1.4
TRAPPC11-208ENST00000511955 NRXN3Q9Y4C0 1643 aa6.29□□□□□ -1.4
TRAPPC11-208ENST00000511955 ALKQ9UM73 1620 aa6.29□□□□□ -1.4
TRAPPC11-208ENST00000511955 PIK3C2GO75747 1445 aa6.29□□□□□ -1.4
TRAPPC11-208ENST00000511955 TMEM94Q12767 1356 aa6.29□□□□□ -1.4
TRAPPC11-208ENST00000511955 UBAP1LF5GYI3 381 aa6.29□□□□□ -1.4
TRAPPC11-208ENST00000511955 GTF2F1P35269 517 aaKnown RBP eCLIP6.29□□□□□ -1.4
TRAPPC11-208ENST00000511955 SRPK2P78362 688 aaKnown RBP6.29□□□□□ -1.4
TRAPPC11-208ENST00000511955 GSE1Q14687 1217 aa6.29□□□□□ -1.4
TRAPPC11-208ENST00000511955 NBPF8Q3BBV2 869 aa6.29□□□□□ -1.4
TRAPPC11-208ENST00000511955 FMNL3Q8IVF7 1028 aa6.29□□□□□ -1.4
TRAPPC11-208ENST00000511955 MSL3Q8N5Y2 521 aaKnown RBP6.29□□□□□ -1.4
TRAPPC11-208ENST00000511955 TRIM34Q9BYJ4 488 aa6.29□□□□□ -1.4
TRAPPC11-208ENST00000511955 CREBZFQ9NS37 354 aa6.29□□□□□ -1.4
TRAPPC11-208ENST00000511955 COL4A3BPQ9Y5P4 624 aa6.29□□□□□ -1.4
TRAPPC11-208ENST00000511955 CEP120Q8N960 986 aa6.28□□□□□ -1.4
TRAPPC11-208ENST00000511955 PROCA1Q8NCQ7 364 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC11-208ENST00000511955 C1orf131Q8NDD1 294 aaKnown RBP6.28□□□□□ -1.4
TRAPPC11-208ENST00000511955 PMFBP1Q8TBY8 1022 aa6.28□□□□□ -1.4
TRAPPC11-208ENST00000511955 RBM19Q9Y4C8 960 aaKnown RBP6.28□□□□□ -1.4
TRAPPC11-208ENST00000511955 STRCP1A6NGW2 1772 aa6.28□□□□□ -1.4
TRAPPC11-208ENST00000511955 S100BP04271 92 aaPredicted RBP6.28□□□□□ -1.4
TRAPPC11-208ENST00000511955 ABL2P42684 1182 aa6.28□□□□□ -1.4
TRAPPC11-208ENST00000511955 NUBP1P53384 320 aa6.28□□□□□ -1.4
TRAPPC11-208ENST00000511955 PDILTQ8N807 584 aa6.28□□□□□ -1.4
TRAPPC11-208ENST00000511955 C14orf93Q9H972 538 aaKnown RBP6.28□□□□□ -1.4
TRAPPC11-208ENST00000511955 IFT172Q9UG01 1749 aa6.28□□□□□ -1.4
TRAPPC11-208ENST00000511955 SETBP1Q9Y6X0 1596 aa6.28□□□□□ -1.4
TRAPPC11-208ENST00000511955 FANCIQ9NVI1 1328 aa6.27□□□□□ -1.41
TRAPPC11-208ENST00000511955 IRX3P78415 501 aaPredicted RBP6.27□□□□□ -1.41
TRAPPC11-208ENST00000511955 SH3D19Q5HYK7 790 aa6.27□□□□□ -1.41
TRAPPC11-208ENST00000511955 ICE2Q659A1 982 aa6.27□□□□□ -1.41
TRAPPC11-208ENST00000511955 ANP32BQ92688 251 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms