RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 USP17L8P0C7I0 530 aa8.83□□□□□ -1
CLIP4-212ENST00000493551 PROCA1Q8NCQ7 364 aaPredicted RBP8.83□□□□□ -1
CLIP4-212ENST00000493551 SLC24A3Q9HC58 644 aa8.83□□□□□ -1
CLIP4-212ENST00000493551 THBS1P07996 1170 aa8.82□□□□□ -1
CLIP4-212ENST00000493551 LINC00114Q6XXX2 140 aa8.82□□□□□ -1
CLIP4-212ENST00000493551 C1QTNF9BB2RNN3 333 aa8.81□□□□□ -1
CLIP4-212ENST00000493551 GNB5O14775 395 aa8.81□□□□□ -1
CLIP4-212ENST00000493551 AMPD1P23109 780 aa8.81□□□□□ -1
CLIP4-212ENST00000493551 LBRQ14739 615 aaKnown RBP8.81□□□□□ -1
CLIP4-212ENST00000493551 RNF20Q5VTR2 975 aa8.81□□□□□ -1
CLIP4-212ENST00000493551 SUV39H2Q9H5I1 410 aa8.81□□□□□ -1
CLIP4-212ENST00000493551 ARHGEF10LQ9HCE6 1279 aa8.81□□□□□ -1
CLIP4-212ENST00000493551 PCDHB9Q9Y5E1 797 aa8.81□□□□□ -1
CLIP4-212ENST00000493551 DCAF1Q9Y4B6 1507 aa8.8□□□□□ -1
CLIP4-212ENST00000493551 KRTAP9-6A0A140TA67 174 aa8.8□□□□□ -1
CLIP4-212ENST00000493551 ZBBXA8MT70 800 aa8.8□□□□□ -1
CLIP4-212ENST00000493551 GPAMQ9HCL2 828 aa8.8□□□□□ -1
CLIP4-212ENST00000493551 A0A1B0GTH6 734 aa8.79□□□□□ -1
CLIP4-212ENST00000493551 HOXB4P17483 251 aaPredicted RBP8.79□□□□□ -1
CLIP4-212ENST00000493551 SLCO4C1Q6ZQN7 724 aa8.79□□□□□ -1
CLIP4-212ENST00000493551 CD163Q86VB7 1156 aa8.79□□□□□ -1
CLIP4-212ENST00000493551 NOP53Q9NZM5 478 aaKnown RBP8.79□□□□□ -1
CLIP4-212ENST00000493551 ERCC6Q03468 1493 aa8.78□□□□□ -1
CLIP4-212ENST00000493551 ATXN7L1Q9ULK2 861 aaPredicted RBP8.78□□□□□ -1
CLIP4-212ENST00000493551 BMP4P12644 408 aa8.77□□□□□ -1.01
CLIP4-212ENST00000493551 SCTRP47872 440 aa8.77□□□□□ -1.01
CLIP4-212ENST00000493551 ESF1Q9H501 851 aaKnown RBP8.77□□□□□ -1.01
CLIP4-212ENST00000493551 TRAK2O60296 914 aa8.76□□□□□ -1.01
CLIP4-212ENST00000493551 CSB-PGBD3P0DP91 1061 aa8.76□□□□□ -1.01
CLIP4-212ENST00000493551 ITGB7P26010 798 aa8.76□□□□□ -1.01
CLIP4-212ENST00000493551 CHRNA4P43681 627 aa8.76□□□□□ -1.01
CLIP4-212ENST00000493551 UBAP2LQ14157 1087 aaKnown RBP8.76□□□□□ -1.01
CLIP4-212ENST00000493551 PGBD3Q8N328 593 aa8.76□□□□□ -1.01
CLIP4-212ENST00000493551 OSBPL3Q9H4L5 887 aa8.76□□□□□ -1.01
CLIP4-212ENST00000493551 GGA1Q9UJY5 639 aa8.76□□□□□ -1.01
CLIP4-212ENST00000493551 DDRGK1Q96HY6 314 aa8.75□□□□□ -1.01
CLIP4-212ENST00000493551 ESYT1Q9BSJ8 1104 aa8.75□□□□□ -1.01
CLIP4-212ENST00000493551 TRIM34Q9BYJ4 488 aa8.75□□□□□ -1.01
CLIP4-212ENST00000493551 GNRH1P01148 92 aa8.74□□□□□ -1.01
CLIP4-212ENST00000493551 FBXO45P0C2W1 286 aa8.74□□□□□ -1.01
CLIP4-212ENST00000493551 DGKGP49619 791 aa8.74□□□□□ -1.01
CLIP4-212ENST00000493551 MCCD1P59942 119 aaPredicted RBP8.74□□□□□ -1.01
CLIP4-212ENST00000493551 EFHC2Q5JST6 749 aa8.74□□□□□ -1.01
CLIP4-212ENST00000493551 ZNF592Q92610 1267 aa8.74□□□□□ -1.01
CLIP4-212ENST00000493551 SEMA6BQ9H3T3 888 aa8.74□□□□□ -1.01
CLIP4-212ENST00000493551 PCDHB11Q9Y5F2 797 aa8.74□□□□□ -1.01
CLIP4-212ENST00000493551 C2CD2LO14523 706 aa8.73□□□□□ -1.01
CLIP4-212ENST00000493551 EPXP11678 715 aa8.73□□□□□ -1.01
CLIP4-212ENST00000493551 FGFR3P22607 806 aa8.73□□□□□ -1.01
CLIP4-212ENST00000493551 PHKA2P46019 1235 aa8.73□□□□□ -1.01
CLIP4-212ENST00000493551 CENPCQ03188 943 aa8.73□□□□□ -1.01
CLIP4-212ENST00000493551 ZMYM1Q5SVZ6 1142 aa8.73□□□□□ -1.01
CLIP4-212ENST00000493551 CNKSR1Q969H4 720 aa8.73□□□□□ -1.01
CLIP4-212ENST00000493551 BTBD6Q96KE9 485 aa8.73□□□□□ -1.01
CLIP4-212ENST00000493551 RAB6BQ9NRW1 208 aa8.73□□□□□ -1.01
CLIP4-212ENST00000493551 CUX2O14529 1486 aa8.72□□□□□ -1.01
CLIP4-212ENST00000493551 RFC5P40937 340 aa8.72□□□□□ -1.01
CLIP4-212ENST00000493551 GNASQ5JWF2 1037 aa8.72□□□□□ -1.01
CLIP4-212ENST00000493551 ABHD17AQ96GS6 310 aa8.72□□□□□ -1.01
CLIP4-212ENST00000493551 ZSCAN10Q96SZ4 725 aaPredicted RBP8.72□□□□□ -1.01
CLIP4-212ENST00000493551 RUBCNLQ9H714 662 aa8.72□□□□□ -1.01
CLIP4-212ENST00000493551 IL2RAP01589 272 aa8.71□□□□□ -1.02
CLIP4-212ENST00000493551 ARAFP10398 606 aa8.71□□□□□ -1.02
CLIP4-212ENST00000493551 GTF2E1P29083 439 aaPredicted RBP8.71□□□□□ -1.02
CLIP4-212ENST00000493551 NDFIP2Q9NV92 336 aa8.71□□□□□ -1.02
CLIP4-212ENST00000493551 DOC2BQ14184 412 aa8.7□□□□□ -1.02
CLIP4-212ENST00000493551 RNF135Q8IUD6 432 aa8.7□□□□□ -1.02
CLIP4-212ENST00000493551 KRTAP1-3Q8IUG1 177 aa8.7□□□□□ -1.02
CLIP4-212ENST00000493551 BNIP3LO60238 219 aa8.69□□□□□ -1.02
CLIP4-212ENST00000493551 MSX1P28360 303 aa8.69□□□□□ -1.02
CLIP4-212ENST00000493551 CTBSQ01459 385 aa8.69□□□□□ -1.02
CLIP4-212ENST00000493551 TMEM214Q6NUQ4 689 aaKnown RBP8.69□□□□□ -1.02
CLIP4-212ENST00000493551 HRH3Q9Y5N1 445 aa8.69□□□□□ -1.02
CLIP4-212ENST00000493551 C4orf17Q53FE4 359 aa8.68□□□□□ -1.02
CLIP4-212ENST00000493551 FAM117AQ9C073 453 aa8.68□□□□□ -1.02
CLIP4-212ENST00000493551 KDM4CQ9H3R0 1056 aa8.68□□□□□ -1.02
CLIP4-212ENST00000493551 NESP48681 1621 aa8.67□□□□□ -1.02
CLIP4-212ENST00000493551 CHSY3Q70JA7 882 aa8.67□□□□□ -1.02
CLIP4-212ENST00000493551 FHDC1Q9C0D6 1143 aaPredicted RBP8.67□□□□□ -1.02
CLIP4-212ENST00000493551 CRISPLD1Q9H336 500 aa8.67□□□□□ -1.02
CLIP4-212ENST00000493551 ZNF330Q9Y3S2 320 aaPredicted RBP8.67□□□□□ -1.02
CLIP4-212ENST00000493551 NEURL1BA8MQ27 555 aa8.66□□□□□ -1.02
CLIP4-212ENST00000493551 MYCP01106 439 aaPredicted RBP8.66□□□□□ -1.02
CLIP4-212ENST00000493551 GATA4P43694 442 aa8.66□□□□□ -1.02
CLIP4-212ENST00000493551 NR1H3Q13133 447 aa8.66□□□□□ -1.02
CLIP4-212ENST00000493551 TMEM259Q4ZIN3 620 aa8.66□□□□□ -1.02
CLIP4-212ENST00000493551 FIGNL1Q6PIW4 674 aa8.66□□□□□ -1.02
CLIP4-212ENST00000493551 XAGE2Q96GT9 111 aa8.66□□□□□ -1.02
CLIP4-212ENST00000493551 ESCO1Q5FWF5 840 aa8.65□□□□□ -1.02
CLIP4-212ENST00000493551 RHBDD1Q8TEB9 315 aa8.65□□□□□ -1.02
CLIP4-212ENST00000493551 SCO2A0A1W2PP80 73 aa8.64□□□□□ -1.03
CLIP4-212ENST00000493551 ADH6P28332 368 aa8.64□□□□□ -1.03
CLIP4-212ENST00000493551 GJD4Q96KN9 370 aaPredicted RBP8.64□□□□□ -1.03
CLIP4-212ENST00000493551 SPATA31C1P0DKV0 1188 aa8.63□□□□□ -1.03
CLIP4-212ENST00000493551 GPBP1L1Q9HC44 474 aaPredicted RBP8.63□□□□□ -1.03
CLIP4-212ENST00000493551 AVENQ9NQS1 362 aaPredicted RBP8.62□□□□□ -1.03
CLIP4-212ENST00000493551 PCDHGC4Q9Y5F7 938 aa8.62□□□□□ -1.03
CLIP4-212ENST00000493551 LCE3BQ5TA77 95 aa8.61□□□□□ -1.03
CLIP4-212ENST00000493551 DNAAF2Q9NVR5 837 aaKnown RBP8.61□□□□□ -1.03
CLIP4-212ENST00000493551 RSPO4Q2I0M5 234 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms