RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 WASLO00401 505 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-213ENST00000474240 SOCS7O14512 581 aa6.94□□□□□ -1.3
ECHDC1-213ENST00000474240 GNB5O14775 395 aa6.94□□□□□ -1.3
ECHDC1-213ENST00000474240 F11P03951 625 aa6.94□□□□□ -1.3
ECHDC1-213ENST00000474240 FBXO31Q5XUX0 539 aaPredicted RBP6.94□□□□□ -1.3
ECHDC1-213ENST00000474240 BANK1Q8NDB2 785 aa6.94□□□□□ -1.3
ECHDC1-213ENST00000474240 CFHR5Q9BXR6 569 aa6.94□□□□□ -1.3
ECHDC1-213ENST00000474240 SPATA31C2B4DYI2 1134 aa6.93□□□□□ -1.3
ECHDC1-213ENST00000474240 SLCO4C1Q6ZQN7 724 aa6.93□□□□□ -1.3
ECHDC1-213ENST00000474240 ERICH6Q7L0X2 663 aa6.93□□□□□ -1.3
ECHDC1-213ENST00000474240 TAS1R3Q7RTX0 852 aa6.93□□□□□ -1.3
ECHDC1-213ENST00000474240 SEPT12Q8IYM1 358 aa6.93□□□□□ -1.3
ECHDC1-213ENST00000474240 PROCA1Q8NCQ7 364 aaPredicted RBP6.93□□□□□ -1.3
ECHDC1-213ENST00000474240 GRIP2Q9C0E4 1043 aa6.93□□□□□ -1.3
ECHDC1-213ENST00000474240 PHF24Q9UPV7 400 aa6.93□□□□□ -1.3
ECHDC1-213ENST00000474240 RFC5P40937 340 aa6.92□□□□□ -1.3
ECHDC1-213ENST00000474240 CLN3Q13286 438 aa6.92□□□□□ -1.3
ECHDC1-213ENST00000474240 ARHGEF10LQ9HCE6 1279 aa6.92□□□□□ -1.3
ECHDC1-213ENST00000474240 HMX1Q9NP08 348 aaPredicted RBP6.92□□□□□ -1.3
ECHDC1-213ENST00000474240 GGA1Q9UJY5 639 aa6.92□□□□□ -1.3
ECHDC1-213ENST00000474240 PIK3R2O00459 728 aa6.91□□□□□ -1.3
ECHDC1-213ENST00000474240 BMP4P12644 408 aa6.91□□□□□ -1.3
ECHDC1-213ENST00000474240 DGKGP49619 791 aa6.91□□□□□ -1.3
ECHDC1-213ENST00000474240 FLIIQ13045 1269 aa6.91□□□□□ -1.3
ECHDC1-213ENST00000474240 FOXD4L6Q3SYB3 417 aaPredicted RBP6.91□□□□□ -1.3
ECHDC1-213ENST00000474240 WDR44Q5JSH3 913 aa6.91□□□□□ -1.3
ECHDC1-213ENST00000474240 FOXD4L3Q6VB84 417 aaPredicted RBP6.91□□□□□ -1.3
ECHDC1-213ENST00000474240 PNMA1Q8ND90 353 aa6.91□□□□□ -1.3
ECHDC1-213ENST00000474240 C2CD2LO14523 706 aa6.9□□□□□ -1.3
ECHDC1-213ENST00000474240 GIGYF1O75420 1035 aaPredicted RBP6.9□□□□□ -1.3
ECHDC1-213ENST00000474240 AP1G2O75843 785 aa6.9□□□□□ -1.3
ECHDC1-213ENST00000474240 ERVK-9P63128 1117 aa6.9□□□□□ -1.3
ECHDC1-213ENST00000474240 CC2D2BQ6DHV5 1058 aa6.9□□□□□ -1.3
ECHDC1-213ENST00000474240 NOP53Q9NZM5 478 aaKnown RBP6.9□□□□□ -1.3
ECHDC1-213ENST00000474240 PHKA2P46019 1235 aa6.89□□□□□ -1.31
ECHDC1-213ENST00000474240 UBAP2LQ14157 1087 aaKnown RBP6.89□□□□□ -1.31
ECHDC1-213ENST00000474240 CYP2U1Q7Z449 544 aa6.89□□□□□ -1.31
ECHDC1-213ENST00000474240 TRIM52Q96A61 297 aa6.89□□□□□ -1.31
ECHDC1-213ENST00000474240 PRM3Q9NNZ6 103 aa6.89□□□□□ -1.31
ECHDC1-213ENST00000474240 RAB6BQ9NRW1 208 aa6.89□□□□□ -1.31
ECHDC1-213ENST00000474240 SCTRP47872 440 aa6.88□□□□□ -1.31
ECHDC1-213ENST00000474240 ABHD17AQ96GS6 310 aa6.88□□□□□ -1.31
ECHDC1-213ENST00000474240 BTBD6Q96KE9 485 aa6.88□□□□□ -1.31
ECHDC1-213ENST00000474240 RUBCNLQ9H714 662 aa6.88□□□□□ -1.31
ECHDC1-213ENST00000474240 PCDHB9Q9Y5E1 797 aa6.88□□□□□ -1.31
ECHDC1-213ENST00000474240 EPXP11678 715 aa6.87□□□□□ -1.31
ECHDC1-213ENST00000474240 ATXN7L1Q9ULK2 861 aaPredicted RBP6.87□□□□□ -1.31
ECHDC1-213ENST00000474240 GTF3C3Q9Y5Q9 886 aa6.87□□□□□ -1.31
ECHDC1-213ENST00000474240 A0A1B0GTH6 734 aa6.86□□□□□ -1.31
ECHDC1-213ENST00000474240 USP17L8P0C7I0 530 aa6.86□□□□□ -1.31
ECHDC1-213ENST00000474240 FGFR3P22607 806 aa6.86□□□□□ -1.31
ECHDC1-213ENST00000474240 GATA4P43694 442 aa6.86□□□□□ -1.31
ECHDC1-213ENST00000474240 CTBSQ01459 385 aa6.86□□□□□ -1.31
ECHDC1-213ENST00000474240 RNF135Q8IUD6 432 aa6.86□□□□□ -1.31
ECHDC1-213ENST00000474240 KRTAP9-9Q9BYP9 154 aa6.86□□□□□ -1.31
ECHDC1-213ENST00000474240 KRTAP9-4Q9BYQ2 154 aa6.86□□□□□ -1.31
ECHDC1-213ENST00000474240 NEURL1BA8MQ27 555 aa6.85□□□□□ -1.31
ECHDC1-213ENST00000474240 RSPO4Q2I0M5 234 aaPredicted RBP6.85□□□□□ -1.31
ECHDC1-213ENST00000474240 OSBPL3Q9H4L5 887 aa6.85□□□□□ -1.31
ECHDC1-213ENST00000474240 BTBD11A6QL63 1104 aa6.84□□□□□ -1.31
ECHDC1-213ENST00000474240 CSB-PGBD3P0DP91 1061 aa6.84□□□□□ -1.31
ECHDC1-213ENST00000474240 CHSY3Q70JA7 882 aa6.84□□□□□ -1.31
ECHDC1-213ENST00000474240 PGBD3Q8N328 593 aa6.84□□□□□ -1.31
ECHDC1-213ENST00000474240 ZFP64Q9NPA5 681 aa6.84□□□□□ -1.31
ECHDC1-213ENST00000474240 NDFIP2Q9NV92 336 aa6.83□□□□□ -1.32
ECHDC1-213ENST00000474240 BNIP3LO60238 219 aa6.82□□□□□ -1.32
ECHDC1-213ENST00000474240 TRAK2O60296 914 aa6.82□□□□□ -1.32
ECHDC1-213ENST00000474240 IL2RAP01589 272 aa6.82□□□□□ -1.32
ECHDC1-213ENST00000474240 ARAFP10398 606 aa6.82□□□□□ -1.32
ECHDC1-213ENST00000474240 MSX1P28360 303 aa6.82□□□□□ -1.32
ECHDC1-213ENST00000474240 MCM6Q14566 821 aa6.82□□□□□ -1.32
ECHDC1-213ENST00000474240 LBRQ14739 615 aaKnown RBP6.82□□□□□ -1.32
ECHDC1-213ENST00000474240 EFHC2Q5JST6 749 aa6.82□□□□□ -1.32
ECHDC1-213ENST00000474240 ARTNQ5T4W7 220 aa6.82□□□□□ -1.32
ECHDC1-213ENST00000474240 CNKSR1Q969H4 720 aa6.82□□□□□ -1.32
ECHDC1-213ENST00000474240 TRIM11Q96F44 468 aa6.82□□□□□ -1.32
ECHDC1-213ENST00000474240 PCDHB11Q9Y5F2 797 aa6.82□□□□□ -1.32
ECHDC1-213ENST00000474240 DYRK3O43781 588 aa6.81□□□□□ -1.32
ECHDC1-213ENST00000474240 CENPCQ03188 943 aa6.81□□□□□ -1.32
ECHDC1-213ENST00000474240 C4orf17Q53FE4 359 aa6.81□□□□□ -1.32
ECHDC1-213ENST00000474240 NKAPLQ5M9Q1 402 aa6.81□□□□□ -1.32
ECHDC1-213ENST00000474240 KRTAP19-1Q8IUB9 90 aa6.81□□□□□ -1.32
ECHDC1-213ENST00000474240 WWC1Q8IX03 1113 aa6.81□□□□□ -1.32
ECHDC1-213ENST00000474240 ZSCAN10Q96SZ4 725 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-213ENST00000474240 ESYT1Q9BSJ8 1104 aa6.81□□□□□ -1.32
ECHDC1-213ENST00000474240 TPSG1Q9NRR2 321 aa6.81□□□□□ -1.32
ECHDC1-213ENST00000474240 ZBBXA8MT70 800 aa6.8□□□□□ -1.32
ECHDC1-213ENST00000474240 FBXO45P0C2W1 286 aa6.8□□□□□ -1.32
ECHDC1-213ENST00000474240 GNASQ5JWF2 1037 aa6.8□□□□□ -1.32
ECHDC1-213ENST00000474240 NBPF11Q86T75 865 aa6.8□□□□□ -1.32
ECHDC1-213ENST00000474240 NDUFB9Q9Y6M9 179 aa6.8□□□□□ -1.32
ECHDC1-213ENST00000474240 KRTAP4-8A0A0G2JLE6 195 aa6.79□□□□□ -1.32
ECHDC1-213ENST00000474240 RAD21O60216 631 aa6.79□□□□□ -1.32
ECHDC1-213ENST00000474240 SPATA31C1P0DKV0 1188 aa6.79□□□□□ -1.32
ECHDC1-213ENST00000474240 RNF20Q5VTR2 975 aa6.79□□□□□ -1.32
ECHDC1-213ENST00000474240 TMEM214Q6NUQ4 689 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-213ENST00000474240 CCDC125Q86Z20 511 aa6.79□□□□□ -1.32
ECHDC1-213ENST00000474240 ZNF592Q92610 1267 aa6.79□□□□□ -1.32
ECHDC1-213ENST00000474240 PLVAPQ9BX97 442 aa6.79□□□□□ -1.32
ECHDC1-213ENST00000474240 TRIM34Q9BYJ4 488 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms