RNA–Protein interactions for RNA: ENST00000461055.2

NEDD9-206, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-206ENST00000461055 COG6Q9Y2V7 657 aa14.04□□□□□ -0.16
NEDD9-206ENST00000461055 ERBB3P21860 1342 aa14.04□□□□□ -0.16
NEDD9-206ENST00000461055 SPATA31A5Q5VU36 1347 aa14.04□□□□□ -0.16
NEDD9-206ENST00000461055 SPATA31A7Q8IWB4 1347 aa14.04□□□□□ -0.16
NEDD9-206ENST00000461055 OVOS2A0A0G2JMS6 1433 aa14.04□□□□□ -0.16
NEDD9-206ENST00000461055 ZBTB7CA1YPR0 619 aa14.03□□□□□ -0.16
NEDD9-206ENST00000461055 TRIM27P14373 513 aa14.03□□□□□ -0.16
NEDD9-206ENST00000461055 BAG6P46379 1132 aa14.03□□□□□ -0.16
NEDD9-206ENST00000461055 ZC3H6P61129 1189 aaKnown RBP14.03□□□□□ -0.16
NEDD9-206ENST00000461055 EZH2Q15910 746 aaKnown RBP14.03□□□□□ -0.16
NEDD9-206ENST00000461055 BCL2L13Q9BXK5 485 aa14.03□□□□□ -0.16
NEDD9-206ENST00000461055 TSPYL4Q9UJ04 414 aa14.03□□□□□ -0.16
NEDD9-206ENST00000461055 KDM2BQ8NHM5 1336 aa14.03□□□□□ -0.16
NEDD9-206ENST00000461055 CAMTA1Q9Y6Y1 1673 aa14.03□□□□□ -0.16
NEDD9-206ENST00000461055 ABCA3Q99758 1704 aa14.02□□□□□ -0.16
NEDD9-206ENST00000461055 CEMIPQ8WUJ3 1361 aa14.02□□□□□ -0.17
NEDD9-206ENST00000461055 C1orf141Q5JVX7 400 aa14.02□□□□□ -0.17
NEDD9-206ENST00000461055 C8orf58Q8NAV2 365 aa14.02□□□□□ -0.17
NEDD9-206ENST00000461055 RWDD1Q9H446 243 aaPredicted RBP14.02□□□□□ -0.17
NEDD9-206ENST00000461055 STRN4Q9NRL3 753 aa14.02□□□□□ -0.17
NEDD9-206ENST00000461055 PTPRCP08575 1304 aa14.01□□□□□ -0.17
NEDD9-206ENST00000461055 TRIM37O94972 964 aa14.01□□□□□ -0.17
NEDD9-206ENST00000461055 PRDM11Q9NQV5 511 aa14.01□□□□□ -0.17
NEDD9-206ENST00000461055 USP35Q9P2H5 1018 aa14.01□□□□□ -0.17
NEDD9-206ENST00000461055 NWD2Q9ULI1 1742 aa14.01□□□□□ -0.17
NEDD9-206ENST00000461055 FAM208AQ9UK61 1670 aaKnown RBP14.01□□□□□ -0.17
NEDD9-206ENST00000461055 HOXB7P09629 217 aa14□□□□□ -0.17
NEDD9-206ENST00000461055 TSPYL6Q8N831 410 aa14□□□□□ -0.17
NEDD9-206ENST00000461055 IL17REQ8NFR9 667 aa14□□□□□ -0.17
NEDD9-206ENST00000461055 RAPGEF4Q8WZA2 1011 aa14□□□□□ -0.17
NEDD9-206ENST00000461055 AXIN2Q9Y2T1 843 aa14□□□□□ -0.17
NEDD9-206ENST00000461055 LRRC37A3O60309 1634 aa14□□□□□ -0.17
NEDD9-206ENST00000461055 NRAPQ86VF7 1730 aa13.99□□□□□ -0.17
NEDD9-206ENST00000461055 RLBP1P12271 317 aa13.99□□□□□ -0.17
NEDD9-206ENST00000461055 TATP17735 454 aaPredicted RBP13.99□□□□□ -0.17
NEDD9-206ENST00000461055 ZNF530Q6P9A1 599 aaPredicted RBP13.99□□□□□ -0.17
NEDD9-206ENST00000461055 SPG7Q9UQ90 795 aa13.99□□□□□ -0.17
NEDD9-206ENST00000461055 LMO7Q8WWI1 1683 aa13.98□□□□□ -0.17
NEDD9-206ENST00000461055 SPATA31A1Q5TZJ5 1347 aa13.98□□□□□ -0.17
NEDD9-206ENST00000461055 CCDC30Q5VVM6 783 aa13.98□□□□□ -0.17
NEDD9-206ENST00000461055 USHBP1Q8N6Y0 703 aa13.98□□□□□ -0.17
NEDD9-206ENST00000461055 CAMKK2Q96RR4 588 aa13.98□□□□□ -0.17
NEDD9-206ENST00000461055 COL18A1P39060 1754 aa13.98□□□□□ -0.17
NEDD9-206ENST00000461055 HSP90AB1P08238 724 aaKnown RBP13.97□□□□□ -0.17
NEDD9-206ENST00000461055 CSB-PGBD3P0DP91 1061 aa13.97□□□□□ -0.17
NEDD9-206ENST00000461055 TEFQ10587 303 aa13.97□□□□□ -0.17
NEDD9-206ENST00000461055 ITPRIPQ8IWB1 547 aa13.97□□□□□ -0.17
NEDD9-206ENST00000461055 STK31Q9BXU1 1019 aa13.97□□□□□ -0.17
NEDD9-206ENST00000461055 NLRP2Q9NX02 1062 aa13.97□□□□□ -0.17
NEDD9-206ENST00000461055 CRYBG1Q9Y4K1 1723 aa13.97□□□□□ -0.17
NEDD9-206ENST00000461055 ABCC4O15439 1325 aa13.96□□□□□ -0.17
NEDD9-206ENST00000461055 ELL2O00472 640 aaPredicted RBP13.96□□□□□ -0.17
NEDD9-206ENST00000461055 APBA3O96018 575 aa13.96□□□□□ -0.17
NEDD9-206ENST00000461055 HDAC1Q13547 482 aaPredicted RBP13.96□□□□□ -0.17
NEDD9-206ENST00000461055 LARP1Q6PKG0 1096 aaKnown RBP13.96□□□□□ -0.17
NEDD9-206ENST00000461055 ZBTB40Q9NUA8 1239 aa13.96□□□□□ -0.17
NEDD9-206ENST00000461055 RNMTO43148 476 aaKnown RBP13.95□□□□□ -0.18
NEDD9-206ENST00000461055 TMEM57Q8N5G2 664 aa13.95□□□□□ -0.18
NEDD9-206ENST00000461055 COL14A1Q05707 1796 aaKnown RBP13.95□□□□□ -0.18
NEDD9-206ENST00000461055 EVA1CP58658 441 aa13.94□□□□□ -0.18
NEDD9-206ENST00000461055 INTS3Q68E01 1043 aaKnown RBP13.94□□□□□ -0.18
NEDD9-206ENST00000461055 WDR17Q8IZU2 1322 aa13.93□□□□□ -0.18
NEDD9-206ENST00000461055 IFNL2Q8IZJ0 200 aa13.93□□□□□ -0.18
NEDD9-206ENST00000461055 RBM19Q9Y4C8 960 aaKnown RBP13.93□□□□□ -0.18
NEDD9-206ENST00000461055 BTBD11A6QL63 1104 aa13.92□□□□□ -0.18
NEDD9-206ENST00000461055 ZBTB7BO15156 539 aaPredicted RBP13.92□□□□□ -0.18
NEDD9-206ENST00000461055 SLC4A2P04920 1241 aa13.92□□□□□ -0.18
NEDD9-206ENST00000461055 FAM196AQ6ZSG2 479 aa13.92□□□□□ -0.18
NEDD9-206ENST00000461055 TNNQ9UQP3 1299 aa13.92□□□□□ -0.18
NEDD9-206ENST00000461055 PCDHB15Q9Y5E8 787 aa13.92□□□□□ -0.18
NEDD9-206ENST00000461055 CACNA1FO60840 1977 aa13.92□□□□□ -0.18
NEDD9-206ENST00000461055 RGPD2P0DJD1 1756 aa13.91□□□□□ -0.18
NEDD9-206ENST00000461055 LRP5O75197 1615 aa13.91□□□□□ -0.18
NEDD9-206ENST00000461055 IGHDP01880 384 aa13.91□□□□□ -0.18
NEDD9-206ENST00000461055 CCT4P50991 539 aaKnown RBP13.91□□□□□ -0.18
NEDD9-206ENST00000461055 PTF1AQ7RTS3 328 aa13.91□□□□□ -0.18
NEDD9-206ENST00000461055 CARD10Q9BWT7 1032 aa13.91□□□□□ -0.18
NEDD9-206ENST00000461055 MIS18AQ9NYP9 233 aa13.91□□□□□ -0.18
NEDD9-206ENST00000461055 THSD7AQ9UPZ6 1657 aa13.91□□□□□ -0.18
NEDD9-206ENST00000461055 EIF4A1P60842 406 aaKnown RBP13.9□□□□□ -0.18
NEDD9-206ENST00000461055 DCAF5Q96JK2 942 aa13.9□□□□□ -0.18
NEDD9-206ENST00000461055 LGR6Q9HBX8 967 aa13.9□□□□□ -0.18
NEDD9-206ENST00000461055 ADAMTS7Q9UKP4 1686 aa13.9□□□□□ -0.18
NEDD9-206ENST00000461055 RGPD5Q99666 1765 aa13.9□□□□□ -0.18
NEDD9-206ENST00000461055 PHKG2P15735 406 aa13.89□□□□□ -0.19
NEDD9-206ENST00000461055 MPRIPQ6WCQ1 1025 aa13.89□□□□□ -0.19
NEDD9-206ENST00000461055 TNS1Q9HBL0 1735 aaKnown RBP13.88□□□□□ -0.19
NEDD9-206ENST00000461055 KRT24Q2M2I5 525 aa13.88□□□□□ -0.19
NEDD9-206ENST00000461055 TOM1L2Q6ZVM7 507 aa13.88□□□□□ -0.19
NEDD9-206ENST00000461055 DISP2A7MBM2 1401 aa13.88□□□□□ -0.19
NEDD9-206ENST00000461055 COL5A2P05997 1499 aaPredicted RBP13.87□□□□□ -0.19
NEDD9-206ENST00000461055 HDGFL1Q5TGJ6 251 aa13.87□□□□□ -0.19
NEDD9-206ENST00000461055 BARGINQ6ZT62 677 aa13.87□□□□□ -0.19
NEDD9-206ENST00000461055 RPAP2Q8IXW5 612 aaPredicted RBP13.87□□□□□ -0.19
NEDD9-206ENST00000461055 GCC1Q96CN9 775 aa13.87□□□□□ -0.19
NEDD9-206ENST00000461055 SLC52A2Q9HAB3 445 aa13.87□□□□□ -0.19
NEDD9-206ENST00000461055 KDM3BQ7LBC6 1761 aa13.86□□□□□ -0.19
NEDD9-206ENST00000461055 HEG1Q9ULI3 1381 aa13.86□□□□□ -0.19
NEDD9-206ENST00000461055 SMC5Q8IY18 1101 aa13.86□□□□□ -0.19
NEDD9-206ENST00000461055 ZCRB1Q8TBF4 217 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms