RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 NOD1Q9Y239 953 aa7.86□□□□□ -1.15
LINC00393-202ENST00000452852 USP17L3A6NCW0 530 aa7.85□□□□□ -1.15
LINC00393-202ENST00000452852 USP17L4A6NCW7 530 aa7.85□□□□□ -1.15
LINC00393-202ENST00000452852 SLC27A3Q5K4L6 730 aa7.85□□□□□ -1.15
LINC00393-202ENST00000452852 USP17L2Q6R6M4 530 aa7.85□□□□□ -1.15
LINC00393-202ENST00000452852 USP17L1Q7RTZ2 530 aa7.85□□□□□ -1.15
LINC00393-202ENST00000452852 GRIP2Q9C0E4 1043 aa7.85□□□□□ -1.15
LINC00393-202ENST00000452852 C1orf115Q9H7X2 142 aa7.85□□□□□ -1.15
LINC00393-202ENST00000452852 TFIP11Q9UBB9 837 aaKnown RBP7.85□□□□□ -1.15
LINC00393-202ENST00000452852 PCDHGA11Q9Y5H2 935 aa7.85□□□□□ -1.15
LINC00393-202ENST00000452852 HRH3Q9Y5N1 445 aa7.85□□□□□ -1.15
LINC00393-202ENST00000452852 ARID3CA6NKF2 412 aa7.84□□□□□ -1.15
LINC00393-202ENST00000452852 PPFIA3O75145 1194 aa7.84□□□□□ -1.15
LINC00393-202ENST00000452852 RHOQP17081 205 aa7.84□□□□□ -1.15
LINC00393-202ENST00000452852 SCNN1DP51172 638 aa7.84□□□□□ -1.15
LINC00393-202ENST00000452852 GDF10P55107 478 aa7.84□□□□□ -1.15
LINC00393-202ENST00000452852 CENPCQ03188 943 aa7.84□□□□□ -1.15
LINC00393-202ENST00000452852 ESCO1Q5FWF5 840 aa7.84□□□□□ -1.15
LINC00393-202ENST00000452852 PLEKHM2Q8IWE5 1019 aa7.84□□□□□ -1.15
LINC00393-202ENST00000452852 SLC35F4A4IF30 521 aa7.83□□□□□ -1.16
LINC00393-202ENST00000452852 PALM3A6NDB9 673 aaPredicted RBP7.83□□□□□ -1.16
LINC00393-202ENST00000452852 GTF2IP78347 998 aa7.83□□□□□ -1.16
LINC00393-202ENST00000452852 PSMG3-AS1Q96PY0 264 aa7.83□□□□□ -1.16
LINC00393-202ENST00000452852 PPP1R12CQ9BZL4 782 aa7.83□□□□□ -1.16
LINC00393-202ENST00000452852 SENP3-EIF4A1A0A087X0R7 540 aa7.82□□□□□ -1.16
LINC00393-202ENST00000452852 INHAP05111 366 aa7.82□□□□□ -1.16
LINC00393-202ENST00000452852 IRS1P35568 1242 aa7.82□□□□□ -1.16
LINC00393-202ENST00000452852 POU4F2Q12837 409 aa7.82□□□□□ -1.16
LINC00393-202ENST00000452852 CCDC155Q8N6L0 562 aa7.82□□□□□ -1.16
LINC00393-202ENST00000452852 MAFBQ9Y5Q3 323 aaPredicted RBP7.82□□□□□ -1.16
LINC00393-202ENST00000452852 TMEM229AB2RXF0 380 aa7.81□□□□□ -1.16
LINC00393-202ENST00000452852 PSME1Q06323 249 aa7.81□□□□□ -1.16
LINC00393-202ENST00000452852 TRIM26Q12899 539 aaPredicted RBP7.81□□□□□ -1.16
LINC00393-202ENST00000452852 KANK3Q6NY19 840 aa7.81□□□□□ -1.16
LINC00393-202ENST00000452852 ZSCAN10Q96SZ4 725 aaPredicted RBP7.81□□□□□ -1.16
LINC00393-202ENST00000452852 FHDC1Q9C0D6 1143 aaPredicted RBP7.81□□□□□ -1.16
LINC00393-202ENST00000452852 MKRN1Q9UHC7 482 aaKnown RBP7.81□□□□□ -1.16
LINC00393-202ENST00000452852 SERTAD1Q9UHV2 236 aa7.81□□□□□ -1.16
LINC00393-202ENST00000452852 SPATA31C2B4DYI2 1134 aa7.8□□□□□ -1.16
LINC00393-202ENST00000452852 TLR1Q15399 786 aa7.8□□□□□ -1.16
LINC00393-202ENST00000452852 NBPF10Q6P3W6 841 aaKnown RBP7.8□□□□□ -1.16
LINC00393-202ENST00000452852 TRIM50Q86XT4 487 aa7.8□□□□□ -1.16
LINC00393-202ENST00000452852 NBPF15Q8N660 670 aa7.8□□□□□ -1.16
LINC00393-202ENST00000452852 WASLO00401 505 aaPredicted RBP7.79□□□□□ -1.16
LINC00393-202ENST00000452852 ZBTB7BO15156 539 aaPredicted RBP7.79□□□□□ -1.16
LINC00393-202ENST00000452852 CLDN10P78369 228 aa7.79□□□□□ -1.16
LINC00393-202ENST00000452852 TMEM214Q6NUQ4 689 aaKnown RBP7.79□□□□□ -1.16
LINC00393-202ENST00000452852 KIAA1024Q9UPX6 916 aa7.79□□□□□ -1.16
LINC00393-202ENST00000452852 ADAM23O75077 832 aa7.78□□□□□ -1.16
LINC00393-202ENST00000452852 LMOD1P29536 600 aaPredicted RBP7.78□□□□□ -1.16
LINC00393-202ENST00000452852 PHKA2P46019 1235 aa7.78□□□□□ -1.16
LINC00393-202ENST00000452852 ATP1A2P50993 1020 aa7.78□□□□□ -1.16
LINC00393-202ENST00000452852 SMTNP53814 917 aa7.78□□□□□ -1.16
LINC00393-202ENST00000452852 TAS1R3Q7RTX0 852 aa7.78□□□□□ -1.16
LINC00393-202ENST00000452852 OGFOD1Q8N543 542 aa7.78□□□□□ -1.16
LINC00393-202ENST00000452852 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.78□□□□□ -1.16
LINC00393-202ENST00000452852 SLC4A9Q96Q91 983 aa7.78□□□□□ -1.16
LINC00393-202ENST00000452852 RB1CC1Q8TDY2 1594 aa7.77□□□□□ -1.17
LINC00393-202ENST00000452852 ITGA6P23229 1130 aa7.77□□□□□ -1.17
LINC00393-202ENST00000452852 GTF2E1P29083 439 aaPredicted RBP7.77□□□□□ -1.17
LINC00393-202ENST00000452852 MARSP56192 900 aaKnown RBP7.77□□□□□ -1.17
LINC00393-202ENST00000452852 PPARGC1BQ86YN6 1023 aaKnown RBP7.77□□□□□ -1.17
LINC00393-202ENST00000452852 SVOPQ8N4V2 548 aa7.77□□□□□ -1.17
LINC00393-202ENST00000452852 DNAAF2Q9NVR5 837 aaKnown RBP7.77□□□□□ -1.17
LINC00393-202ENST00000452852 ZNF358Q9NW07 568 aa7.77□□□□□ -1.17
LINC00393-202ENST00000452852 A6NJY4 79 aa7.76□□□□□ -1.17
LINC00393-202ENST00000452852 C4orf17Q53FE4 359 aa7.76□□□□□ -1.17
LINC00393-202ENST00000452852 WDR44Q5JSH3 913 aa7.76□□□□□ -1.17
LINC00393-202ENST00000452852 GNASQ5JWF2 1037 aa7.76□□□□□ -1.17
LINC00393-202ENST00000452852 CFAP70Q5T0N1 1121 aa7.76□□□□□ -1.17
LINC00393-202ENST00000452852 KANK4Q5T7N3 995 aaPredicted RBP7.76□□□□□ -1.17
LINC00393-202ENST00000452852 CCDC102BQ68D86 513 aa7.76□□□□□ -1.17
LINC00393-202ENST00000452852 TPCN2Q8NHX9 752 aa7.76□□□□□ -1.17
LINC00393-202ENST00000452852 TIMMDC1Q9NPL8 285 aa7.76□□□□□ -1.17
LINC00393-202ENST00000452852 CUEDC1Q9NWM3 386 aaPredicted RBP7.76□□□□□ -1.17
LINC00393-202ENST00000452852 DYRK1BQ9Y463 629 aa7.76□□□□□ -1.17
LINC00393-202ENST00000452852 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.75□□□□□ -1.17
LINC00393-202ENST00000452852 BACH1O14867 736 aa7.75□□□□□ -1.17
LINC00393-202ENST00000452852 RASA1P20936 1047 aa7.75□□□□□ -1.17
LINC00393-202ENST00000452852 VWA5B2Q8N398 1253 aa7.75□□□□□ -1.17
LINC00393-202ENST00000452852 LARGE2Q8N3Y3 721 aa7.75□□□□□ -1.17
LINC00393-202ENST00000452852 RHBDD1Q8TEB9 315 aa7.75□□□□□ -1.17
LINC00393-202ENST00000452852 ZNF594Q96JF6 807 aaPredicted RBP7.75□□□□□ -1.17
LINC00393-202ENST00000452852 GAS2L1Q99501 681 aaPredicted RBP7.75□□□□□ -1.17
LINC00393-202ENST00000452852 KRTAP9-2Q9BYQ4 174 aa7.75□□□□□ -1.17
LINC00393-202ENST00000452852 CDC14CA4D256 554 aa7.74□□□□□ -1.17
LINC00393-202ENST00000452852 MSTNO14793 375 aa7.74□□□□□ -1.17
LINC00393-202ENST00000452852 MTFR1Q15390 333 aa7.74□□□□□ -1.17
LINC00393-202ENST00000452852 RIPOR1Q6ZS17 1223 aa7.74□□□□□ -1.17
LINC00393-202ENST00000452852 GPR161Q8N6U8 529 aaKnown RBP7.74□□□□□ -1.17
LINC00393-202ENST00000452852 NANOS1Q8WY41 292 aaKnown RBP7.74□□□□□ -1.17
LINC00393-202ENST00000452852 SCARF2Q96GP6 870 aaPredicted RBP7.74□□□□□ -1.17
LINC00393-202ENST00000452852 VRTNQ9H8Y1 702 aa7.74□□□□□ -1.17
LINC00393-202ENST00000452852 SFI1A8K8P3 1242 aa7.73□□□□□ -1.17
LINC00393-202ENST00000452852 CDK2AP1O14519 115 aa7.73□□□□□ -1.17
LINC00393-202ENST00000452852 DKK1O94907 266 aa7.73□□□□□ -1.17
LINC00393-202ENST00000452852 RFX1P22670 979 aa7.73□□□□□ -1.17
LINC00393-202ENST00000452852 CRTC2Q53ET0 693 aaPredicted RBP7.73□□□□□ -1.17
LINC00393-202ENST00000452852 SIX5Q8N196 739 aa7.73□□□□□ -1.17
LINC00393-202ENST00000452852 CNTNAP3BQ96NU0 1288 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms