RNA–Protein interactions for RNA: ENST00000440664.5

LINC01549-201, Transcript of long intergenic non-protein coding RNA 1549, humanhuman

TSL 3 BASIC

Gene LINC01549, Length 714 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549-201ENST00000440664 TRIM11Q96F44 468 aa6.44□□□□□ -1.38
LINC01549-201ENST00000440664 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.44□□□□□ -1.38
LINC01549-201ENST00000440664 POLR3EQ9NVU0 708 aa6.44□□□□□ -1.38
LINC01549-201ENST00000440664 JAG1P78504 1218 aa6.43□□□□□ -1.38
LINC01549-201ENST00000440664 FBXO31Q5XUX0 539 aaPredicted RBP6.43□□□□□ -1.38
LINC01549-201ENST00000440664 PPP2R2DQ66LE6 453 aa6.43□□□□□ -1.38
LINC01549-201ENST00000440664 CHSY3Q70JA7 882 aa6.43□□□□□ -1.38
LINC01549-201ENST00000440664 RNF135Q8IUD6 432 aa6.43□□□□□ -1.38
LINC01549-201ENST00000440664 CDV3Q9UKY7 258 aaKnown RBP6.43□□□□□ -1.38
LINC01549-201ENST00000440664 H2AFB1P0C5Y9 115 aa6.42□□□□□ -1.38
LINC01549-201ENST00000440664 H2AFB2P0C5Z0 115 aa6.42□□□□□ -1.38
LINC01549-201ENST00000440664 POU4F2Q12837 409 aa6.42□□□□□ -1.38
LINC01549-201ENST00000440664 PRRT3Q5FWE3 981 aa6.42□□□□□ -1.38
LINC01549-201ENST00000440664 KDF1Q8NAX2 398 aaPredicted RBP6.42□□□□□ -1.38
LINC01549-201ENST00000440664 ZNF784Q8NCA9 323 aaPredicted RBP6.42□□□□□ -1.38
LINC01549-201ENST00000440664 HELBQ8NG08 1087 aaPredicted RBP6.42□□□□□ -1.38
LINC01549-201ENST00000440664 TMPRSS4Q9NRS4 437 aa6.42□□□□□ -1.38
LINC01549-201ENST00000440664 PROCA1Q8NCQ7 364 aaPredicted RBP6.41□□□□□ -1.38
LINC01549-201ENST00000440664 F11P03951 625 aa6.4□□□□□ -1.38
LINC01549-201ENST00000440664 TAL1P17542 331 aaPredicted RBP6.4□□□□□ -1.38
LINC01549-201ENST00000440664 TSC1Q92574 1164 aa6.4□□□□□ -1.38
LINC01549-201ENST00000440664 PCMTD2Q9NV79 361 aa6.4□□□□□ -1.38
LINC01549-201ENST00000440664 SPDYE3A6NKU9 549 aa6.39□□□□□ -1.39
LINC01549-201ENST00000440664 NEURL1BA8MQ27 555 aa6.39□□□□□ -1.39
LINC01549-201ENST00000440664 C2CD2LO14523 706 aa6.39□□□□□ -1.39
LINC01549-201ENST00000440664 ADD1P35611 737 aaKnown RBP6.39□□□□□ -1.39
LINC01549-201ENST00000440664 RAB15P59190 212 aa6.39□□□□□ -1.39
LINC01549-201ENST00000440664 CTDSPL2Q05D32 466 aa6.39□□□□□ -1.39
LINC01549-201ENST00000440664 GOPCQ9HD26 462 aa6.39□□□□□ -1.39
LINC01549-201ENST00000440664 MEN1O00255 615 aa6.38□□□□□ -1.39
LINC01549-201ENST00000440664 SLC27A3Q5K4L6 730 aa6.38□□□□□ -1.39
LINC01549-201ENST00000440664 LCE4AQ5TA78 99 aa6.38□□□□□ -1.39
LINC01549-201ENST00000440664 TIMMDC1Q9NPL8 285 aa6.38□□□□□ -1.39
LINC01549-201ENST00000440664 GPC1P35052 558 aa6.37□□□□□ -1.39
LINC01549-201ENST00000440664 GPKOWQ92917 476 aaPredicted RBP eCLIP6.37□□□□□ -1.39
LINC01549-201ENST00000440664 LILRA1O75019 489 aa6.36□□□□□ -1.39
LINC01549-201ENST00000440664 THBS1P07996 1170 aa6.36□□□□□ -1.39
LINC01549-201ENST00000440664 NBPF10Q6P3W6 841 aaKnown RBP6.36□□□□□ -1.39
LINC01549-201ENST00000440664 NBPF15Q8N660 670 aa6.36□□□□□ -1.39
LINC01549-201ENST00000440664 NACC1Q96RE7 527 aa6.36□□□□□ -1.39
LINC01549-201ENST00000440664 GPAMQ9HCL2 828 aa6.36□□□□□ -1.39
LINC01549-201ENST00000440664 ARAFP10398 606 aa6.35□□□□□ -1.39
LINC01549-201ENST00000440664 LRRN4Q8WUT4 740 aa6.35□□□□□ -1.39
LINC01549-201ENST00000440664 ARHGAP9Q9BRR9 750 aa6.35□□□□□ -1.39
LINC01549-201ENST00000440664 KRTAP9-8Q9BYQ0 159 aa6.35□□□□□ -1.39
LINC01549-201ENST00000440664 ATXN7L1Q9ULK2 861 aaPredicted RBP6.35□□□□□ -1.39
LINC01549-201ENST00000440664 RNF112Q9ULX5 631 aa6.35□□□□□ -1.39
LINC01549-201ENST00000440664 FGFR3P22607 806 aa6.34□□□□□ -1.39
LINC01549-201ENST00000440664 BRPF1P55201 1214 aaPredicted RBP6.34□□□□□ -1.39
LINC01549-201ENST00000440664 ZC3H4Q9UPT8 1303 aaKnown RBP6.33□□□□□ -1.4
LINC01549-201ENST00000440664 RFC5P40937 340 aa6.33□□□□□ -1.4
LINC01549-201ENST00000440664 CTBSQ01459 385 aa6.33□□□□□ -1.4
LINC01549-201ENST00000440664 NEUROD2Q15784 382 aa6.33□□□□□ -1.4
LINC01549-201ENST00000440664 PDXDC2PQ6P474 469 aa6.33□□□□□ -1.4
LINC01549-201ENST00000440664 TRIM52Q96A61 297 aa6.33□□□□□ -1.4
LINC01549-201ENST00000440664 ABHD17AQ96GS6 310 aa6.33□□□□□ -1.4
LINC01549-201ENST00000440664 FKBPLQ9UIM3 349 aa6.33□□□□□ -1.4
LINC01549-201ENST00000440664 FAM229AH3BQW9 127 aa6.32□□□□□ -1.4
LINC01549-201ENST00000440664 NR6A1Q15406 480 aa6.32□□□□□ -1.4
LINC01549-201ENST00000440664 CCER1Q8TC90 406 aaPredicted RBP6.32□□□□□ -1.4
LINC01549-201ENST00000440664 AP1G2O75843 785 aa6.31□□□□□ -1.4
LINC01549-201ENST00000440664 ZBTB33Q86T24 672 aa6.31□□□□□ -1.4
LINC01549-201ENST00000440664 ATP5J2-PTCD1G3V325 749 aa6.3□□□□□ -1.4
LINC01549-201ENST00000440664 ERVH48-1M5A8F1 160 aa6.3□□□□□ -1.4
LINC01549-201ENST00000440664 USP17L8P0C7I0 530 aa6.3□□□□□ -1.4
LINC01549-201ENST00000440664 NBPF20Q3BBV1 942 aa6.3□□□□□ -1.4
LINC01549-201ENST00000440664 WDR44Q5JSH3 913 aa6.3□□□□□ -1.4
LINC01549-201ENST00000440664 TAS1R3Q7RTX0 852 aa6.3□□□□□ -1.4
LINC01549-201ENST00000440664 TP53INP1Q96A56 240 aa6.3□□□□□ -1.4
LINC01549-201ENST00000440664 PCMTD1Q96MG8 357 aaPredicted RBP6.3□□□□□ -1.4
LINC01549-201ENST00000440664 NLRP3Q96P20 1036 aa6.3□□□□□ -1.4
LINC01549-201ENST00000440664 OCSTAMPQ9BR26 566 aa6.3□□□□□ -1.4
LINC01549-201ENST00000440664 HMX1Q9NP08 348 aaPredicted RBP6.3□□□□□ -1.4
LINC01549-201ENST00000440664 CYLDQ9NQC7 956 aa6.3□□□□□ -1.4
LINC01549-201ENST00000440664 GPSM3Q9Y4H4 160 aa6.3□□□□□ -1.4
LINC01549-201ENST00000440664 WASLO00401 505 aaPredicted RBP6.29□□□□□ -1.4
LINC01549-201ENST00000440664 ADH6P28332 368 aa6.29□□□□□ -1.4
LINC01549-201ENST00000440664 IL27Q8NEV9 243 aa6.29□□□□□ -1.4
LINC01549-201ENST00000440664 EPS8L1Q8TE68 723 aa6.29□□□□□ -1.4
LINC01549-201ENST00000440664 CSB-PGBD3P0DP91 1061 aa6.28□□□□□ -1.4
LINC01549-201ENST00000440664 UBAP2LQ14157 1087 aaKnown RBP6.28□□□□□ -1.4
LINC01549-201ENST00000440664 GRIK4Q16099 956 aa6.28□□□□□ -1.4
LINC01549-201ENST00000440664 TPRNQ4KMQ1 711 aa6.28□□□□□ -1.4
LINC01549-201ENST00000440664 TMEM259Q4ZIN3 620 aa6.28□□□□□ -1.4
LINC01549-201ENST00000440664 PGBD3Q8N328 593 aa6.28□□□□□ -1.4
LINC01549-201ENST00000440664 A0A1W2PRU2 124 aa6.27□□□□□ -1.41
LINC01549-201ENST00000440664 SPATA31C2B4DYI2 1134 aa6.27□□□□□ -1.41
LINC01549-201ENST00000440664 TRIM28Q13263 835 aaKnown RBP6.27□□□□□ -1.41
LINC01549-201ENST00000440664 LBRQ14739 615 aaKnown RBP6.27□□□□□ -1.41
LINC01549-201ENST00000440664 TRIM34Q9BYJ4 488 aa6.27□□□□□ -1.41
LINC01549-201ENST00000440664 ATP1B4Q9UN42 357 aaPredicted RBP6.27□□□□□ -1.41
LINC01549-201ENST00000440664 SSTR4P31391 388 aa6.26□□□□□ -1.41
LINC01549-201ENST00000440664 PTK2Q05397 1052 aa6.26□□□□□ -1.41
LINC01549-201ENST00000440664 GRIP2Q9C0E4 1043 aa6.26□□□□□ -1.41
LINC01549-201ENST00000440664 OAS3Q9Y6K5 1087 aaKnown RBP6.26□□□□□ -1.41
LINC01549-201ENST00000440664 BNIP3LO60238 219 aa6.25□□□□□ -1.41
LINC01549-201ENST00000440664 EFHC2Q5JST6 749 aa6.25□□□□□ -1.41
LINC01549-201ENST00000440664 TXNRD3Q86VQ6 643 aa6.25□□□□□ -1.41
LINC01549-201ENST00000440664 FCHSD1Q86WN1 690 aa6.25□□□□□ -1.41
LINC01549-201ENST00000440664 GJD4Q96KN9 370 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms