RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 WDR97A6NE52 1622 aa9.93□□□□□ -0.82
LINC00458-201ENST00000423442 SYNJ2O15056 1496 aa9.93□□□□□ -0.82
LINC00458-201ENST00000423442 FGD5Q6ZNL6 1462 aa9.93□□□□□ -0.82
LINC00458-201ENST00000423442 MAP3K10Q02779 954 aa9.93□□□□□ -0.82
LINC00458-201ENST00000423442 SCARF2Q96GP6 870 aaPredicted RBP9.93□□□□□ -0.82
LINC00458-201ENST00000423442 GRIN2BQ13224 1484 aa9.92□□□□□ -0.82
LINC00458-201ENST00000423442 FOXK2Q01167 660 aa9.92□□□□□ -0.82
LINC00458-201ENST00000423442 NEUROD2Q15784 382 aa9.92□□□□□ -0.82
LINC00458-201ENST00000423442 SLC27A3Q5K4L6 730 aa9.92□□□□□ -0.82
LINC00458-201ENST00000423442 TRIM52Q96A61 297 aa9.92□□□□□ -0.82
LINC00458-201ENST00000423442 GAS2L1Q99501 681 aaPredicted RBP9.92□□□□□ -0.82
LINC00458-201ENST00000423442 MBIPQ9NS73 344 aa9.92□□□□□ -0.82
LINC00458-201ENST00000423442 GTPBP3Q969Y2 492 aaKnown RBP9.91□□□□□ -0.82
LINC00458-201ENST00000423442 NLRP3Q96P20 1036 aa9.91□□□□□ -0.82
LINC00458-201ENST00000423442 DYRK1BQ9Y463 629 aa9.91□□□□□ -0.82
LINC00458-201ENST00000423442 IGF1RP08069 1367 aa9.9□□□□□ -0.82
LINC00458-201ENST00000423442 ERCC6L2Q5T890 1561 aa9.9□□□□□ -0.82
LINC00458-201ENST00000423442 NR1H3Q13133 447 aa9.9□□□□□ -0.82
LINC00458-201ENST00000423442 RNF20Q5VTR2 975 aa9.9□□□□□ -0.82
LINC00458-201ENST00000423442 GMCL1Q96IK5 515 aa9.9□□□□□ -0.82
LINC00458-201ENST00000423442 GRIP2Q9C0E4 1043 aa9.9□□□□□ -0.82
LINC00458-201ENST00000423442 PCDHB11Q9Y5F2 797 aa9.9□□□□□ -0.82
LINC00458-201ENST00000423442 GPR37L1O60883 481 aa9.89□□□□□ -0.83
LINC00458-201ENST00000423442 CLN3Q13286 438 aa9.89□□□□□ -0.83
LINC00458-201ENST00000423442 NBPF10Q6P3W6 841 aaKnown RBP9.89□□□□□ -0.83
LINC00458-201ENST00000423442 FOXR1Q6PIV2 292 aa9.89□□□□□ -0.83
LINC00458-201ENST00000423442 NBPF15Q8N660 670 aa9.89□□□□□ -0.83
LINC00458-201ENST00000423442 OSBPL3Q9H4L5 887 aa9.89□□□□□ -0.83
LINC00458-201ENST00000423442 ARHGEF10LQ9HCE6 1279 aa9.89□□□□□ -0.83
LINC00458-201ENST00000423442 PBRM1Q86U86 1689 aa9.88□□□□□ -0.83
LINC00458-201ENST00000423442 CYP2U1Q7Z449 544 aa9.88□□□□□ -0.83
LINC00458-201ENST00000423442 CCDC125Q86Z20 511 aa9.88□□□□□ -0.83
LINC00458-201ENST00000423442 TRAK2O60296 914 aa9.87□□□□□ -0.83
LINC00458-201ENST00000423442 ENAMQ9NRM1 1142 aa9.87□□□□□ -0.83
LINC00458-201ENST00000423442 RAB6BQ9NRW1 208 aa9.87□□□□□ -0.83
LINC00458-201ENST00000423442 CUX1P39880 1505 aa9.87□□□□□ -0.83
LINC00458-201ENST00000423442 KIF13AQ9H1H9 1805 aa9.86□□□□□ -0.83
LINC00458-201ENST00000423442 CNTNAP5Q8WYK1 1306 aa9.86□□□□□ -0.83
LINC00458-201ENST00000423442 H7C1W4 665 aa9.86□□□□□ -0.83
LINC00458-201ENST00000423442 MTMR14Q8NCE2 650 aa9.86□□□□□ -0.83
LINC00458-201ENST00000423442 ACDQ96AP0 544 aa9.86□□□□□ -0.83
LINC00458-201ENST00000423442 SPATA31C2B4DYI2 1134 aa9.85□□□□□ -0.83
LINC00458-201ENST00000423442 MCCD1P59942 119 aaPredicted RBP9.85□□□□□ -0.83
LINC00458-201ENST00000423442 TIMMDC1Q9NPL8 285 aa9.85□□□□□ -0.83
LINC00458-201ENST00000423442 BCRP11274 1271 aa9.84□□□□□ -0.83
LINC00458-201ENST00000423442 TRERF1Q96PN7 1200 aa9.84□□□□□ -0.83
LINC00458-201ENST00000423442 ESF1Q9H501 851 aaKnown RBP9.84□□□□□ -0.83
LINC00458-201ENST00000423442 WASLO00401 505 aaPredicted RBP9.83□□□□□ -0.84
LINC00458-201ENST00000423442 TAS1R3Q7RTX0 852 aa9.83□□□□□ -0.84
LINC00458-201ENST00000423442 NEDD1Q8NHV4 660 aa9.83□□□□□ -0.84
LINC00458-201ENST00000423442 NUCKS1Q9H1E3 243 aaKnown RBP9.83□□□□□ -0.84
LINC00458-201ENST00000423442 SNRKQ9NRH2 765 aa9.83□□□□□ -0.84
LINC00458-201ENST00000423442 ZNF330Q9Y3S2 320 aaPredicted RBP9.83□□□□□ -0.84
LINC00458-201ENST00000423442 IL2RAP01589 272 aa9.82□□□□□ -0.84
LINC00458-201ENST00000423442 F11P03951 625 aa9.82□□□□□ -0.84
LINC00458-201ENST00000423442 MX2P20592 715 aa9.82□□□□□ -0.84
LINC00458-201ENST00000423442 BANK1Q8NDB2 785 aa9.82□□□□□ -0.84
LINC00458-201ENST00000423442 CNKSR1Q969H4 720 aa9.82□□□□□ -0.84
LINC00458-201ENST00000423442 CDCA7Q9BWT1 371 aaPredicted RBP9.82□□□□□ -0.84
LINC00458-201ENST00000423442 NDUFB9Q9Y6M9 179 aa9.82□□□□□ -0.84
LINC00458-201ENST00000423442 CEP170Q5SW79 1584 aa9.82□□□□□ -0.84
LINC00458-201ENST00000423442 GRIN2AQ12879 1464 aa9.81□□□□□ -0.84
LINC00458-201ENST00000423442 THBS1P07996 1170 aa9.81□□□□□ -0.84
LINC00458-201ENST00000423442 PHKA2P46019 1235 aa9.81□□□□□ -0.84
LINC00458-201ENST00000423442 CENPCQ03188 943 aa9.81□□□□□ -0.84
LINC00458-201ENST00000423442 WDR44Q5JSH3 913 aa9.81□□□□□ -0.84
LINC00458-201ENST00000423442 CCDC85AQ96PX6 553 aaPredicted RBP9.81□□□□□ -0.84
LINC00458-201ENST00000423442 GNRH1P01148 92 aa9.8□□□□□ -0.84
LINC00458-201ENST00000423442 BRPF1P55201 1214 aaPredicted RBP9.8□□□□□ -0.84
LINC00458-201ENST00000423442 DCAF5Q96JK2 942 aa9.8□□□□□ -0.84
LINC00458-201ENST00000423442 ESYT1Q9BSJ8 1104 aa9.8□□□□□ -0.84
LINC00458-201ENST00000423442 GPAMQ9HCL2 828 aa9.8□□□□□ -0.84
LINC00458-201ENST00000423442 ABCA5Q8WWZ7 1642 aa9.8□□□□□ -0.84
LINC00458-201ENST00000423442 PHF20L1A8MW92 1017 aa9.79□□□□□ -0.84
LINC00458-201ENST00000423442 BEND7Q8N7W2 519 aaPredicted RBP9.79□□□□□ -0.84
LINC00458-201ENST00000423442 ZNF592Q92610 1267 aa9.79□□□□□ -0.84
LINC00458-201ENST00000423442 CEP126Q9P2H0 1117 aa9.79□□□□□ -0.84
LINC00458-201ENST00000423442 ABCA10Q8WWZ4 1543 aa9.78□□□□□ -0.84
LINC00458-201ENST00000423442 PLA2G4EQ3MJ16 856 aa9.78□□□□□ -0.84
LINC00458-201ENST00000423442 NUP160Q12769 1436 aa9.78□□□□□ -0.84
LINC00458-201ENST00000423442 SHROOM2Q13796 1616 aa9.78□□□□□ -0.84
LINC00458-201ENST00000423442 SOCS7O14512 581 aa9.77□□□□□ -0.85
LINC00458-201ENST00000423442 MSTNO14793 375 aa9.77□□□□□ -0.85
LINC00458-201ENST00000423442 ITGB2P05107 769 aa9.77□□□□□ -0.85
LINC00458-201ENST00000423442 FAM69CQ0P6D2 419 aa9.77□□□□□ -0.85
LINC00458-201ENST00000423442 PODNQ7Z5L7 613 aa9.77□□□□□ -0.85
LINC00458-201ENST00000423442 NSFL1CQ9UNZ2 370 aaKnown RBP9.77□□□□□ -0.85
LINC00458-201ENST00000423442 HRH3Q9Y5N1 445 aa9.77□□□□□ -0.85
LINC00458-201ENST00000423442 OIP5O43482 229 aa9.76□□□□□ -0.85
LINC00458-201ENST00000423442 MYCP01106 439 aaPredicted RBP9.76□□□□□ -0.85
LINC00458-201ENST00000423442 TSGA10IPQ3SY00 556 aa9.76□□□□□ -0.85
LINC00458-201ENST00000423442 ZSCAN10Q96SZ4 725 aaPredicted RBP9.76□□□□□ -0.85
LINC00458-201ENST00000423442 ADAMTS12P58397 1594 aa9.75□□□□□ -0.85
LINC00458-201ENST00000423442 STAU1O95793 577 aaKnown RBP9.75□□□□□ -0.85
LINC00458-201ENST00000423442 XAGE2Q96GT9 111 aa9.75□□□□□ -0.85
LINC00458-201ENST00000423442 SPOCK3Q9BQ16 436 aa9.75□□□□□ -0.85
LINC00458-201ENST00000423442 OXCT2Q9BYC2 517 aaPredicted RBP9.75□□□□□ -0.85
LINC00458-201ENST00000423442 ABCC10Q5T3U5 1492 aa9.74□□□□□ -0.85
LINC00458-201ENST00000423442 ADAM23O75077 832 aa9.74□□□□□ -0.85
LINC00458-201ENST00000423442 SNRPNP63162 240 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms