RNA–Protein interactions for RNA: ENST00000412908.6

PSMA3-202, Transcript of proteasome subunit alpha 3, humanhuman

TSL 1 (best) BASIC

Gene PSMA3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-202ENST00000412908 USP17L4A6NCW7 530 aa10.65□□□□□ -0.7
PSMA3-202ENST00000412908 PALM3A6NDB9 673 aaPredicted RBP10.65□□□□□ -0.7
PSMA3-202ENST00000412908 ARID3CA6NKF2 412 aa10.65□□□□□ -0.7
PSMA3-202ENST00000412908 GNRH1P01148 92 aa10.65□□□□□ -0.7
PSMA3-202ENST00000412908 USP17L2Q6R6M4 530 aa10.65□□□□□ -0.7
PSMA3-202ENST00000412908 USP17L1Q7RTZ2 530 aa10.65□□□□□ -0.7
PSMA3-202ENST00000412908 PPP1R12CQ9BZL4 782 aa10.65□□□□□ -0.7
PSMA3-202ENST00000412908 GAPVD1Q14C86 1478 aa10.65□□□□□ -0.7
PSMA3-202ENST00000412908 TDRD9Q8NDG6 1382 aaKnown RBP10.65□□□□□ -0.71
PSMA3-202ENST00000412908 RAD54L2Q9Y4B4 1467 aa10.64□□□□□ -0.71
PSMA3-202ENST00000412908 LZTS3O60299 673 aaPredicted RBP10.64□□□□□ -0.71
PSMA3-202ENST00000412908 CHMP7Q8WUX9 453 aaPredicted RBP10.64□□□□□ -0.71
PSMA3-202ENST00000412908 WDR97A6NE52 1622 aa10.64□□□□□ -0.71
PSMA3-202ENST00000412908 MAGI1Q96QZ7 1491 aaPredicted RBP10.63□□□□□ -0.71
PSMA3-202ENST00000412908 FOXD4L5Q5VV16 416 aaPredicted RBP10.63□□□□□ -0.71
PSMA3-202ENST00000412908 GTF2IP78347 998 aa10.62□□□□□ -0.71
PSMA3-202ENST00000412908 PSME1Q06323 249 aa10.62□□□□□ -0.71
PSMA3-202ENST00000412908 CLN3Q13286 438 aa10.62□□□□□ -0.71
PSMA3-202ENST00000412908 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.62□□□□□ -0.71
PSMA3-202ENST00000412908 RNF217Q8TC41 542 aa10.62□□□□□ -0.71
PSMA3-202ENST00000412908 CNKSR1Q969H4 720 aa10.62□□□□□ -0.71
PSMA3-202ENST00000412908 MAFBQ9Y5Q3 323 aaPredicted RBP10.62□□□□□ -0.71
PSMA3-202ENST00000412908 SOGA1O94964 1423 aa10.61□□□□□ -0.71
PSMA3-202ENST00000412908 IL2RAP01589 272 aa10.61□□□□□ -0.71
PSMA3-202ENST00000412908 LMOD1P29536 600 aaPredicted RBP10.61□□□□□ -0.71
PSMA3-202ENST00000412908 SLC27A3Q5K4L6 730 aa10.61□□□□□ -0.71
PSMA3-202ENST00000412908 PRICKLE2Q7Z3G6 844 aa10.61□□□□□ -0.71
PSMA3-202ENST00000412908 PLEKHM2Q8IWE5 1019 aa10.61□□□□□ -0.71
PSMA3-202ENST00000412908 ETNK1Q9HBU6 452 aa10.61□□□□□ -0.71
PSMA3-202ENST00000412908 MKRN1Q9UHC7 482 aaKnown RBP10.61□□□□□ -0.71
PSMA3-202ENST00000412908 PCDHGA11Q9Y5H2 935 aa10.61□□□□□ -0.71
PSMA3-202ENST00000412908 RNF144AP50876 292 aaPredicted RBP10.6□□□□□ -0.71
PSMA3-202ENST00000412908 ESCO1Q5FWF5 840 aa10.6□□□□□ -0.71
PSMA3-202ENST00000412908 ZNF775Q96BV0 537 aaPredicted RBP10.6□□□□□ -0.71
PSMA3-202ENST00000412908 ESYT1Q9BSJ8 1104 aa10.6□□□□□ -0.71
PSMA3-202ENST00000412908 SYNJ2O15056 1496 aa10.6□□□□□ -0.71
PSMA3-202ENST00000412908 RFX1P22670 979 aa10.59□□□□□ -0.71
PSMA3-202ENST00000412908 GDF10P55107 478 aa10.59□□□□□ -0.71
PSMA3-202ENST00000412908 CENPCQ03188 943 aa10.59□□□□□ -0.71
PSMA3-202ENST00000412908 XAGE2Q96GT9 111 aa10.59□□□□□ -0.71
PSMA3-202ENST00000412908 GRIN2BQ13224 1484 aa10.59□□□□□ -0.71
PSMA3-202ENST00000412908 RHOQP17081 205 aa10.58□□□□□ -0.72
PSMA3-202ENST00000412908 LYSMD3Q7Z3D4 306 aa10.58□□□□□ -0.72
PSMA3-202ENST00000412908 TRIM50Q86XT4 487 aa10.58□□□□□ -0.72
PSMA3-202ENST00000412908 SERTAD1Q9UHV2 236 aa10.58□□□□□ -0.72
PSMA3-202ENST00000412908 GPC1P35052 558 aa10.57□□□□□ -0.72
PSMA3-202ENST00000412908 SCNN1DP51172 638 aa10.57□□□□□ -0.72
PSMA3-202ENST00000412908 ERICH6Q7L0X2 663 aa10.57□□□□□ -0.72
PSMA3-202ENST00000412908 TIMELESSQ9UNS1 1208 aa10.57□□□□□ -0.72
PSMA3-202ENST00000412908 INHAP05111 366 aa10.56□□□□□ -0.72
PSMA3-202ENST00000412908 VEGFBP49765 207 aa10.56□□□□□ -0.72
PSMA3-202ENST00000412908 PTSQ03393 145 aa10.56□□□□□ -0.72
PSMA3-202ENST00000412908 OGFOD1Q8N543 542 aa10.56□□□□□ -0.72
PSMA3-202ENST00000412908 DNAAF2Q9NVR5 837 aaKnown RBP10.56□□□□□ -0.72
PSMA3-202ENST00000412908 TMEM229AB2RXF0 380 aa10.55□□□□□ -0.72
PSMA3-202ENST00000412908 RASA1P20936 1047 aa10.55□□□□□ -0.72
PSMA3-202ENST00000412908 ATP1A2P50993 1020 aa10.55□□□□□ -0.72
PSMA3-202ENST00000412908 CLDN10P78369 228 aa10.55□□□□□ -0.72
PSMA3-202ENST00000412908 POU4F2Q12837 409 aa10.55□□□□□ -0.72
PSMA3-202ENST00000412908 CDCA8Q53HL2 280 aa10.55□□□□□ -0.72
PSMA3-202ENST00000412908 CFAP70Q5T0N1 1121 aa10.55□□□□□ -0.72
PSMA3-202ENST00000412908 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.55□□□□□ -0.72
PSMA3-202ENST00000412908 CCDC97Q96F63 343 aaPredicted RBP10.55□□□□□ -0.72
PSMA3-202ENST00000412908 ZSCAN10Q96SZ4 725 aaPredicted RBP10.55□□□□□ -0.72
PSMA3-202ENST00000412908 GRIP2Q9C0E4 1043 aa10.55□□□□□ -0.72
PSMA3-202ENST00000412908 NXF1Q9UBU9 619 aaKnown RBP10.55□□□□□ -0.72
PSMA3-202ENST00000412908 FGD5Q6ZNL6 1462 aa10.55□□□□□ -0.72
PSMA3-202ENST00000412908 ZBTB7BO15156 539 aaPredicted RBP10.54□□□□□ -0.72
PSMA3-202ENST00000412908 TLR1Q15399 786 aa10.54□□□□□ -0.72
PSMA3-202ENST00000412908 TPCN2Q8NHX9 752 aa10.54□□□□□ -0.72
PSMA3-202ENST00000412908 ZNF594Q96JF6 807 aaPredicted RBP10.54□□□□□ -0.72
PSMA3-202ENST00000412908 VRTNQ9H8Y1 702 aa10.54□□□□□ -0.72
PSMA3-202ENST00000412908 KIAA1024Q9UPX6 916 aa10.54□□□□□ -0.72
PSMA3-202ENST00000412908 TERTO14746 1132 aaKnown RBP10.53□□□□□ -0.72
PSMA3-202ENST00000412908 GTF2E1P29083 439 aaPredicted RBP10.53□□□□□ -0.72
PSMA3-202ENST00000412908 CCDC102BQ68D86 513 aa10.53□□□□□ -0.72
PSMA3-202ENST00000412908 TMEM214Q6NUQ4 689 aaKnown RBP10.53□□□□□ -0.72
PSMA3-202ENST00000412908 HRH3Q9Y5N1 445 aa10.53□□□□□ -0.72
PSMA3-202ENST00000412908 KIF13AQ9H1H9 1805 aa10.53□□□□□ -0.72
PSMA3-202ENST00000412908 ERCC6L2Q5T890 1561 aa10.52□□□□□ -0.72
PSMA3-202ENST00000412908 KANK4Q5T7N3 995 aaPredicted RBP10.52□□□□□ -0.73
PSMA3-202ENST00000412908 LARP1Q6PKG0 1096 aaKnown RBP10.52□□□□□ -0.73
PSMA3-202ENST00000412908 FHDC1Q9C0D6 1143 aaPredicted RBP10.52□□□□□ -0.73
PSMA3-202ENST00000412908 SUPT5HO00267 1087 aaKnown RBP10.51□□□□□ -0.73
PSMA3-202ENST00000412908 PHKA2P46019 1235 aa10.51□□□□□ -0.73
PSMA3-202ENST00000412908 SMTNP53814 917 aa10.51□□□□□ -0.73
PSMA3-202ENST00000412908 LARGE2Q8N3Y3 721 aa10.51□□□□□ -0.73
PSMA3-202ENST00000412908 ZNF358Q9NW07 568 aa10.51□□□□□ -0.73
PSMA3-202ENST00000412908 SERPINA10Q9UK55 444 aa10.51□□□□□ -0.73
PSMA3-202ENST00000412908 PPFIA3O75145 1194 aa10.5□□□□□ -0.73
PSMA3-202ENST00000412908 NBPF10Q6P3W6 841 aaKnown RBP10.5□□□□□ -0.73
PSMA3-202ENST00000412908 NBPF15Q8N660 670 aa10.5□□□□□ -0.73
PSMA3-202ENST00000412908 CCDC155Q8N6L0 562 aa10.5□□□□□ -0.73
PSMA3-202ENST00000412908 C1orf115Q9H7X2 142 aa10.5□□□□□ -0.73
PSMA3-202ENST00000412908 RBM19Q9Y4C8 960 aaKnown RBP10.5□□□□□ -0.73
PSMA3-202ENST00000412908 PBRM1Q86U86 1689 aa10.5□□□□□ -0.73
PSMA3-202ENST00000412908 SLC35F4A4IF30 521 aa10.49□□□□□ -0.73
PSMA3-202ENST00000412908 WASLO00401 505 aaPredicted RBP10.49□□□□□ -0.73
PSMA3-202ENST00000412908 BACH1O14867 736 aa10.49□□□□□ -0.73
PSMA3-202ENST00000412908 GNASQ5JWF2 1037 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 1534.8 ms