RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 SORBS3O60504 671 aa2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 PTCD1O75127 700 aaKnown RBP2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 RAB11FIP3O75154 756 aa2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 DGAT1O75907 488 aa2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 CLSTN1O94985 981 aa2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 S1PR4O95977 384 aa2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 CTHP32929 405 aa2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 GTF2IP78347 998 aa2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 FGD1P98174 961 aa2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 PSMD2Q13200 908 aa2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 NAA30Q147X3 362 aaPredicted RBP2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 PKDCCQ504Y2 493 aa2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 OXLD1Q5BKU9 147 aa2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 CCDC102BQ68D86 513 aa2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 DESI1Q6ICB0 168 aa2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 SDE2Q6IQ49 451 aa2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 TMC7Q7Z402 723 aa2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 METTL16Q86W50 562 aaKnown RBP2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 SIX5Q8N196 739 aa2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 ANKLE1Q8NAG6 615 aa2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 SLC43A3Q8NBI5 491 aa2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 TPCN2Q8NHX9 752 aa2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 PSMD1Q99460 953 aa2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 ACBD3Q9H3P7 528 aa2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 ZSWIM4Q9H7M6 989 aa2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 NLRP2Q9NX02 1062 aa2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 PARP2Q9UGN5 583 aa2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 DOLKQ9UPQ8 538 aa2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 KIAA1024Q9UPX6 916 aa2.98□□□□□ -1.93
HMGN2P39-201ENST00000398005 ZBTB7BO15156 539 aaPredicted RBP2.97□□□□□ -1.93
HMGN2P39-201ENST00000398005 FAM13AO94988 1023 aa2.97□□□□□ -1.93
HMGN2P39-201ENST00000398005 LDHBP07195 334 aaKnown RBP2.97□□□□□ -1.93
HMGN2P39-201ENST00000398005 IBSPP21815 317 aaPredicted RBP2.97□□□□□ -1.93
HMGN2P39-201ENST00000398005 ZNF76P36508 570 aa2.97□□□□□ -1.93
HMGN2P39-201ENST00000398005 IGBP1P78318 339 aa2.97□□□□□ -1.93
HMGN2P39-201ENST00000398005 FANCCQ00597 558 aa2.97□□□□□ -1.93
HMGN2P39-201ENST00000398005 PLCB3Q01970 1234 aa2.97□□□□□ -1.93
HMGN2P39-201ENST00000398005 PDE3BQ13370 1112 aa2.97□□□□□ -1.93
HMGN2P39-201ENST00000398005 AAMPQ13685 434 aa2.97□□□□□ -1.93
HMGN2P39-201ENST00000398005 Q3C1V9 767 aa2.97□□□□□ -1.93
HMGN2P39-201ENST00000398005 PLA2G2CQ5R387 149 aa2.97□□□□□ -1.93
HMGN2P39-201ENST00000398005 ZNF697Q5TEC3 545 aa2.97□□□□□ -1.93
HMGN2P39-201ENST00000398005 PHTF2Q8N3S3 785 aa2.97□□□□□ -1.93
HMGN2P39-201ENST00000398005 ZNF526Q8TF50 670 aaPredicted RBP2.97□□□□□ -1.93
HMGN2P39-201ENST00000398005 ARMC5Q96C12 935 aa2.97□□□□□ -1.93
HMGN2P39-201ENST00000398005 DUSP9Q99956 384 aaKnown RBP2.97□□□□□ -1.93
HMGN2P39-201ENST00000398005 METTL5Q9NRN9 209 aaKnown RBP2.97□□□□□ -1.93
HMGN2P39-201ENST00000398005 MAP10Q9P2G4 905 aa2.97□□□□□ -1.93
HMGN2P39-201ENST00000398005 INPP5FQ9Y2H2 1132 aa2.97□□□□□ -1.93
HMGN2P39-201ENST00000398005 EPB41L3Q9Y2J2 1087 aaPredicted RBP2.97□□□□□ -1.93
HMGN2P39-201ENST00000398005 FAM187AA6NFU0 413 aa2.96□□□□□ -1.94
HMGN2P39-201ENST00000398005 TNFRSF10AO00220 468 aa2.96□□□□□ -1.94
HMGN2P39-201ENST00000398005 ST8SIA5O15466 376 aa2.96□□□□□ -1.94
HMGN2P39-201ENST00000398005 TREHO43280 583 aa2.96□□□□□ -1.94
HMGN2P39-201ENST00000398005 ACTN4O43707 911 aaKnown RBP2.96□□□□□ -1.94
HMGN2P39-201ENST00000398005 PRPF40AO75400 957 aaKnown RBP2.96□□□□□ -1.94
HMGN2P39-201ENST00000398005 DKK1O94907 266 aa2.96□□□□□ -1.94
HMGN2P39-201ENST00000398005 TNNI2P48788 182 aa2.96□□□□□ -1.94
HMGN2P39-201ENST00000398005 ANAPC15P60006 121 aa2.96□□□□□ -1.94
HMGN2P39-201ENST00000398005 ATP2B2Q01814 1243 aa2.96□□□□□ -1.94
HMGN2P39-201ENST00000398005 FKBP5Q13451 457 aaPredicted RBP2.96□□□□□ -1.94
HMGN2P39-201ENST00000398005 ECM1Q16610 540 aa2.96□□□□□ -1.94
HMGN2P39-201ENST00000398005 PTPROQ16827 1216 aa2.96□□□□□ -1.94
HMGN2P39-201ENST00000398005 PUS10Q3MIT2 529 aaKnown RBP2.96□□□□□ -1.94
HMGN2P39-201ENST00000398005 TSGA10IPQ3SY00 556 aa2.96□□□□□ -1.94
HMGN2P39-201ENST00000398005 KMT5BQ4FZB7 885 aa2.96□□□□□ -1.94
HMGN2P39-201ENST00000398005 LDLRAD1Q5T700 205 aa2.96□□□□□ -1.94
HMGN2P39-201ENST00000398005 SOGA3Q5TF21 947 aa2.96□□□□□ -1.94
HMGN2P39-201ENST00000398005 EGFLAMQ63HQ2 1017 aa2.96□□□□□ -1.94
HMGN2P39-201ENST00000398005 CAPN12Q6ZSI9 719 aa2.96□□□□□ -1.94
HMGN2P39-201ENST00000398005 TMC4Q7Z404 712 aa2.96□□□□□ -1.94
HMGN2P39-201ENST00000398005 HELQQ8TDG4 1101 aa2.96□□□□□ -1.94
HMGN2P39-201ENST00000398005 SPACA7Q96KW9 195 aa2.96□□□□□ -1.94
HMGN2P39-201ENST00000398005 PRR14Q9BWN1 585 aa2.96□□□□□ -1.94
HMGN2P39-201ENST00000398005 RBCK1Q9BYM8 510 aa2.96□□□□□ -1.94
HMGN2P39-201ENST00000398005 PIF1Q9H611 641 aa2.96□□□□□ -1.94
HMGN2P39-201ENST00000398005 AAASQ9NRG9 546 aa2.96□□□□□ -1.94
HMGN2P39-201ENST00000398005 GPSM3Q9Y4H4 160 aa2.96□□□□□ -1.94
HMGN2P39-201ENST00000398005 STK10O94804 968 aaKnown RBP2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 ADH1BP00325 375 aa2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 F12P00748 615 aaPredicted RBP2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 MPSTP25325 297 aa2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 DAB2P98082 770 aa2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 ARID5AQ03989 594 aa2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 FMR1Q06787 632 aaKnown RBP eCLIP2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 EHHADHQ08426 723 aa2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 BMS1Q14692 1282 aaKnown RBP2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 RNF187Q5TA31 235 aaPredicted RBP2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 PDXDC2PQ6P474 469 aa2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 TREML4Q6UXN2 200 aa2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 ZBTB33Q86T24 672 aa2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 VPS37DQ86XT2 251 aa2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 DZIP3Q86Y13 1208 aaKnown RBP2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 TSEN2Q8NCE0 465 aaKnown RBP2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 ARMC2Q8NEN0 867 aa2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 GAS2L2Q8NHY3 880 aa2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 ZCRB1Q8TBF4 217 aaKnown RBP2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 ADAM32Q8TC27 787 aa2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 VTI1AQ96AJ9 217 aa2.95□□□□□ -1.94
HMGN2P39-201ENST00000398005 GPATCH3Q96I76 525 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms