RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 SNX16P57768 344 aa15.41■□□□□ 0.06
HIPK3-202ENST00000379016 KIF4BQ2VIQ3 1234 aa15.41■□□□□ 0.06
HIPK3-202ENST00000379016 MKRN1Q9UHC7 482 aaKnown RBP15.41■□□□□ 0.06
HIPK3-202ENST00000379016 CUX2O14529 1486 aa15.41■□□□□ 0.06
HIPK3-202ENST00000379016 PDE3BQ13370 1112 aa15.4■□□□□ 0.06
HIPK3-202ENST00000379016 WHAMMQ8TF30 809 aa15.4■□□□□ 0.06
HIPK3-202ENST00000379016 DYNC1I1O14576 645 aa15.4■□□□□ 0.06
HIPK3-202ENST00000379016 DDX46Q7L014 1031 aaKnown RBP15.4■□□□□ 0.06
HIPK3-202ENST00000379016 EVC2Q86UK5 1308 aa15.4■□□□□ 0.06
HIPK3-202ENST00000379016 TCHPQ9BT92 498 aa15.4■□□□□ 0.06
HIPK3-202ENST00000379016 CWC25Q9NXE8 425 aaPredicted RBP15.4■□□□□ 0.06
HIPK3-202ENST00000379016 POLR3DP05423 398 aaPredicted RBP15.4■□□□□ 0.06
HIPK3-202ENST00000379016 RRP1P56182 461 aaKnown RBP15.4■□□□□ 0.06
HIPK3-202ENST00000379016 ESCO1Q5FWF5 840 aa15.4■□□□□ 0.06
HIPK3-202ENST00000379016 SAMM50Q9Y512 469 aa15.4■□□□□ 0.06
HIPK3-202ENST00000379016 SETD5Q9C0A6 1442 aa15.39■□□□□ 0.06
HIPK3-202ENST00000379016 MBD3O95983 291 aa15.39■□□□□ 0.05
HIPK3-202ENST00000379016 ATP2B3Q16720 1220 aa15.39■□□□□ 0.05
HIPK3-202ENST00000379016 IQCGQ9H095 443 aaKnown RBP15.39■□□□□ 0.05
HIPK3-202ENST00000379016 CYP46A1Q9Y6A2 500 aa15.39■□□□□ 0.05
HIPK3-202ENST00000379016 CTR9Q6PD62 1173 aa15.39■□□□□ 0.05
HIPK3-202ENST00000379016 SEPT14Q6ZU15 432 aa15.39■□□□□ 0.05
HIPK3-202ENST00000379016 SYCP3Q8IZU3 236 aa15.39■□□□□ 0.05
HIPK3-202ENST00000379016 CCDC89Q8N998 374 aa15.39■□□□□ 0.05
HIPK3-202ENST00000379016 PHLDB1Q86UU1 1377 aa15.39■□□□□ 0.05
HIPK3-202ENST00000379016 LARP1BQ659C4 914 aaKnown RBP15.39■□□□□ 0.05
HIPK3-202ENST00000379016 PAFAH1B1P43034 410 aa15.39■□□□□ 0.05
HIPK3-202ENST00000379016 ARHGAP35Q9NRY4 1499 aa15.39■□□□□ 0.05
HIPK3-202ENST00000379016 GGNBP2Q9H3C7 697 aa15.39■□□□□ 0.05
HIPK3-202ENST00000379016 CAMK4Q16566 473 aa15.38■□□□□ 0.05
HIPK3-202ENST00000379016 HAUS7Q99871 368 aa15.38■□□□□ 0.05
HIPK3-202ENST00000379016 ABCF2Q9UG63 623 aa15.38■□□□□ 0.05
HIPK3-202ENST00000379016 TCERG1LQ5VWI1 586 aa15.38■□□□□ 0.05
HIPK3-202ENST00000379016 BICD1Q96G01 975 aa15.38■□□□□ 0.05
HIPK3-202ENST00000379016 NUP88Q99567 741 aaPredicted RBP15.38■□□□□ 0.05
HIPK3-202ENST00000379016 GBP3Q9H0R5 595 aa15.38■□□□□ 0.05
HIPK3-202ENST00000379016 WWC3Q9ULE0 1092 aa15.38■□□□□ 0.05
HIPK3-202ENST00000379016 SMTNL1A8MU46 457 aa15.38■□□□□ 0.05
HIPK3-202ENST00000379016 CUL5Q93034 780 aa15.38■□□□□ 0.05
HIPK3-202ENST00000379016 DACT3Q96B18 629 aaPredicted RBP15.38■□□□□ 0.05
HIPK3-202ENST00000379016 URI1O94763 535 aaPredicted RBP15.38■□□□□ 0.05
HIPK3-202ENST00000379016 SEPT8Q92599 483 aa15.38■□□□□ 0.05
HIPK3-202ENST00000379016 CARMIL1Q5VZK9 1371 aa15.38■□□□□ 0.05
HIPK3-202ENST00000379016 SPATA32Q96LK8 384 aa15.38■□□□□ 0.05
HIPK3-202ENST00000379016 CABP2Q9NPB3 220 aa15.38■□□□□ 0.05
HIPK3-202ENST00000379016 XPCQ01831 940 aaPredicted RBP15.37■□□□□ 0.05
HIPK3-202ENST00000379016 TAF12Q16514 161 aa15.37■□□□□ 0.05
HIPK3-202ENST00000379016 CPLX3Q8WVH0 158 aa15.37■□□□□ 0.05
HIPK3-202ENST00000379016 PDE1CQ14123 709 aaPredicted RBP15.37■□□□□ 0.05
HIPK3-202ENST00000379016 MKNK2Q9HBH9 465 aa15.37■□□□□ 0.05
HIPK3-202ENST00000379016 PRKCSHP14314 528 aaPredicted RBP15.37■□□□□ 0.05
HIPK3-202ENST00000379016 RFC1P35251 1148 aaPredicted RBP15.37■□□□□ 0.05
HIPK3-202ENST00000379016 MINDY4BA8MYZ0 360 aa15.37■□□□□ 0.05
HIPK3-202ENST00000379016 GMNNO75496 209 aa15.37■□□□□ 0.05
HIPK3-202ENST00000379016 KRT85P78386 507 aa15.36■□□□□ 0.05
HIPK3-202ENST00000379016 FHAD1B1AJZ9 1412 aa15.36■□□□□ 0.05
HIPK3-202ENST00000379016 ATXN8OSP0DMR3 200 aa15.36■□□□□ 0.05
HIPK3-202ENST00000379016 CEP120Q8N960 986 aa15.36■□□□□ 0.05
HIPK3-202ENST00000379016 ALS2CR12Q96Q35 445 aa15.36■□□□□ 0.05
HIPK3-202ENST00000379016 KIF5AQ12840 1032 aa15.36■□□□□ 0.05
HIPK3-202ENST00000379016 CDKL5O76039 1030 aa15.36■□□□□ 0.05
HIPK3-202ENST00000379016 PANK1Q8TE04 598 aa15.36■□□□□ 0.05
HIPK3-202ENST00000379016 GEN1Q17RS7 908 aa15.36■□□□□ 0.05
HIPK3-202ENST00000379016 PDCL2Q8N4E4 241 aa15.36■□□□□ 0.05
HIPK3-202ENST00000379016 UTP14AQ9BVJ6 771 aaKnown RBP15.36■□□□□ 0.05
HIPK3-202ENST00000379016 CEP131Q9UPN4 1083 aa15.36■□□□□ 0.05
HIPK3-202ENST00000379016 PROCA1Q8NCQ7 364 aaPredicted RBP15.36■□□□□ 0.05
HIPK3-202ENST00000379016 MCM3P25205 808 aa15.35■□□□□ 0.05
HIPK3-202ENST00000379016 MNAT1P51948 309 aa15.35■□□□□ 0.05
HIPK3-202ENST00000379016 ANKRD1Q15327 319 aa15.35■□□□□ 0.05
HIPK3-202ENST00000379016 GBP7Q8N8V2 638 aaPredicted RBP15.35■□□□□ 0.05
HIPK3-202ENST00000379016 FAM114A1Q8IWE2 563 aa15.35■□□□□ 0.05
HIPK3-202ENST00000379016 TDRD9Q8NDG6 1382 aaKnown RBP15.34■□□□□ 0.05
HIPK3-202ENST00000379016 USO1O60763 962 aaKnown RBP15.34■□□□□ 0.05
HIPK3-202ENST00000379016 KIF15Q9NS87 1388 aa15.34■□□□□ 0.05
HIPK3-202ENST00000379016 CABP4P57796 275 aa15.34■□□□□ 0.05
HIPK3-202ENST00000379016 NLRP6P59044 892 aa15.34■□□□□ 0.05
HIPK3-202ENST00000379016 CUL4BQ13620 913 aa15.34■□□□□ 0.05
HIPK3-202ENST00000379016 CRCPO75575 148 aa15.34■□□□□ 0.05
HIPK3-202ENST00000379016 GJC1P36383 396 aa15.34■□□□□ 0.05
HIPK3-202ENST00000379016 CCDC30Q5VVM6 783 aa15.34■□□□□ 0.05
HIPK3-202ENST00000379016 CKAP2LQ8IYA6 745 aa15.34■□□□□ 0.05
HIPK3-202ENST00000379016 TMEM132EQ6IEE7 984 aa15.33■□□□□ 0.05
HIPK3-202ENST00000379016 ZSCAN25Q6NSZ9 544 aa15.33■□□□□ 0.05
HIPK3-202ENST00000379016 ABTB2Q8N961 1025 aa15.33■□□□□ 0.05
HIPK3-202ENST00000379016 ZBTB9Q96C00 473 aa15.33■□□□□ 0.05
HIPK3-202ENST00000379016 ANKRD30AQ9BXX3 1397 aa15.33■□□□□ 0.05
HIPK3-202ENST00000379016 IDH1O75874 414 aaKnown RBP15.33■□□□□ 0.05
HIPK3-202ENST00000379016 CCDC82Q8N4S0 544 aa15.33■□□□□ 0.05
HIPK3-202ENST00000379016 CCT6BQ92526 530 aa15.33■□□□□ 0.04
HIPK3-202ENST00000379016 GTF2F1P35269 517 aaKnown RBP eCLIP15.33■□□□□ 0.04
HIPK3-202ENST00000379016 SLC4A8Q2Y0W8 1093 aa15.33■□□□□ 0.04
HIPK3-202ENST00000379016 PPME1Q9Y570 386 aa15.33■□□□□ 0.04
HIPK3-202ENST00000379016 NLRP5P59047 1200 aa15.33■□□□□ 0.04
HIPK3-202ENST00000379016 CEP83Q9Y592 693 aa15.33■□□□□ 0.04
HIPK3-202ENST00000379016 FGFR1OPO95684 399 aaKnown RBP15.33■□□□□ 0.04
HIPK3-202ENST00000379016 CETN1Q12798 172 aa15.33■□□□□ 0.04
HIPK3-202ENST00000379016 MIPOL1Q8TD10 442 aa15.32■□□□□ 0.04
HIPK3-202ENST00000379016 SMC6Q96SB8 1091 aa15.32■□□□□ 0.04
HIPK3-202ENST00000379016 MYO1BO43795 1136 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms