RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 IQCEQ6IPM2 695 aa20.08■□□□□ 0.8
PTP4A1-201ENST00000370651 OSCARQ8IYS5 282 aa20.08■□□□□ 0.8
PTP4A1-201ENST00000370651 GBP3Q9H0R5 595 aa20.08■□□□□ 0.8
PTP4A1-201ENST00000370651 FAM69CQ0P6D2 419 aa20.08■□□□□ 0.8
PTP4A1-201ENST00000370651 TXLNBQ8N3L3 684 aa20.08■□□□□ 0.8
PTP4A1-201ENST00000370651 CTAGE5O15320 804 aa20.07■□□□□ 0.8
PTP4A1-201ENST00000370651 CTDP1Q9Y5B0 961 aaPredicted RBP20.07■□□□□ 0.8
PTP4A1-201ENST00000370651 STX6O43752 255 aa20.07■□□□□ 0.8
PTP4A1-201ENST00000370651 USP8P40818 1118 aa20.07■□□□□ 0.8
PTP4A1-201ENST00000370651 FAM193AP78312 1265 aa20.07■□□□□ 0.8
PTP4A1-201ENST00000370651 NUP133Q8WUM0 1156 aa20.07■□□□□ 0.8
PTP4A1-201ENST00000370651 ERLIN2O94905 339 aa20.07■□□□□ 0.8
PTP4A1-201ENST00000370651 TATP17735 454 aaPredicted RBP20.07■□□□□ 0.8
PTP4A1-201ENST00000370651 NUCB1Q02818 461 aa20.07■□□□□ 0.8
PTP4A1-201ENST00000370651 TTC22Q5TAA0 569 aa20.06■□□□□ 0.8
PTP4A1-201ENST00000370651 CEP126Q9P2H0 1117 aa20.06■□□□□ 0.8
PTP4A1-201ENST00000370651 GNAT3A8MTJ3 354 aa20.06■□□□□ 0.8
PTP4A1-201ENST00000370651 F6X3S4 739 aa20.06■□□□□ 0.8
PTP4A1-201ENST00000370651 BTBD11A6QL63 1104 aa20.06■□□□□ 0.8
PTP4A1-201ENST00000370651 ZFYVE27Q5T4F4 411 aa20.06■□□□□ 0.8
PTP4A1-201ENST00000370651 CCDC61Q9Y6R9 512 aa20.06■□□□□ 0.8
PTP4A1-201ENST00000370651 UBE2HP62256 183 aa20.05■□□□□ 0.8
PTP4A1-201ENST00000370651 TRMT1Q9NXH9 659 aaKnown RBP20.05■□□□□ 0.8
PTP4A1-201ENST00000370651 CCDC57Q2TAC2 916 aa20.05■□□□□ 0.8
PTP4A1-201ENST00000370651 ESCO1Q5FWF5 840 aa20.05■□□□□ 0.8
PTP4A1-201ENST00000370651 CALCOCO1Q9P1Z2 691 aa20.05■□□□□ 0.8
PTP4A1-201ENST00000370651 NESP48681 1621 aa20.05■□□□□ 0.8
PTP4A1-201ENST00000370651 LRRFIP2Q9Y608 721 aaKnown RBP20.05■□□□□ 0.8
PTP4A1-201ENST00000370651 CALRP27797 417 aaKnown RBP20.04■□□□□ 0.8
PTP4A1-201ENST00000370651 U3KPZ7 1027 aaPredicted RBP20.04■□□□□ 0.8
PTP4A1-201ENST00000370651 FAM177BA6PVY3 158 aa20.04■□□□□ 0.8
PTP4A1-201ENST00000370651 SNX21Q969T3 373 aa20.04■□□□□ 0.8
PTP4A1-201ENST00000370651 HCLS1P14317 486 aaPredicted RBP20.04■□□□□ 0.8
PTP4A1-201ENST00000370651 ATF3P18847 181 aa20.04■□□□□ 0.8
PTP4A1-201ENST00000370651 IMMTQ16891 758 aaKnown RBP20.04■□□□□ 0.8
PTP4A1-201ENST00000370651 ZHX1Q9UKY1 873 aaPredicted RBP20.04■□□□□ 0.8
PTP4A1-201ENST00000370651 ARHGEF11O15085 1522 aa20.03■□□□□ 0.8
PTP4A1-201ENST00000370651 HSP90AB3PQ58FF7 597 aa20.03■□□□□ 0.8
PTP4A1-201ENST00000370651 WASF1Q92558 559 aa20.03■□□□□ 0.8
PTP4A1-201ENST00000370651 BOLA2Q9H3K6 86 aa20.03■□□□□ 0.8
PTP4A1-201ENST00000370651 KRT18P05783 430 aaKnown RBP20.03■□□□□ 0.8
PTP4A1-201ENST00000370651 TOP1P11387 765 aaKnown RBP20.03■□□□□ 0.8
PTP4A1-201ENST00000370651 LARP6Q9BRS8 491 aaKnown RBP20.03■□□□□ 0.8
PTP4A1-201ENST00000370651 SCAF11Q99590 1463 aaKnown RBP20.03■□□□□ 0.8
PTP4A1-201ENST00000370651 PTPRCP08575 1304 aa20.03■□□□□ 0.8
PTP4A1-201ENST00000370651 GJB2P29033 226 aa20.03■□□□□ 0.8
PTP4A1-201ENST00000370651 GSDMDP57764 484 aa20.03■□□□□ 0.8
PTP4A1-201ENST00000370651 NUDT16Q96DE0 195 aaKnown RBP20.03■□□□□ 0.8
PTP4A1-201ENST00000370651 CRACR2AQ9BSW2 395 aa20.03■□□□□ 0.8
PTP4A1-201ENST00000370651 IL16Q14005 1332 aa20.02■□□□□ 0.8
PTP4A1-201ENST00000370651 ZNF165P49910 485 aa20.02■□□□□ 0.8
PTP4A1-201ENST00000370651 CENPHQ9H3R5 247 aa20.02■□□□□ 0.8
PTP4A1-201ENST00000370651 HMGXB3Q12766 1538 aa20.02■□□□□ 0.8
PTP4A1-201ENST00000370651 CCDC148Q8NFR7 591 aa20.02■□□□□ 0.8
PTP4A1-201ENST00000370651 TMX3Q96JJ7 454 aa20.02■□□□□ 0.8
PTP4A1-201ENST00000370651 TANGO6Q9C0B7 1094 aa20.02■□□□□ 0.8
PTP4A1-201ENST00000370651 TFIP11Q9UBB9 837 aaKnown RBP20.02■□□□□ 0.8
PTP4A1-201ENST00000370651 MAPK8IP2Q13387 824 aaPredicted RBP20.02■□□□□ 0.79
PTP4A1-201ENST00000370651 KIAA1328Q86T90 577 aa20.01■□□□□ 0.79
PTP4A1-201ENST00000370651 GNL3LQ9NVN8 582 aaKnown RBP20.01■□□□□ 0.79
PTP4A1-201ENST00000370651 ZKSCAN5Q9Y2L8 839 aa20.01■□□□□ 0.79
PTP4A1-201ENST00000370651 SPDYE4A6NLX3 237 aa20.01■□□□□ 0.79
PTP4A1-201ENST00000370651 KIF5CO60282 957 aa20.01■□□□□ 0.79
PTP4A1-201ENST00000370651 CASQ1P31415 396 aa20.01■□□□□ 0.79
PTP4A1-201ENST00000370651 KIAA0586Q9BVV6 1533 aa20■□□□□ 0.79
PTP4A1-201ENST00000370651 DNMBPQ6XZF7 1577 aa20■□□□□ 0.79
PTP4A1-201ENST00000370651 EIF5P55010 431 aaKnown RBP20■□□□□ 0.79
PTP4A1-201ENST00000370651 CABP4P57796 275 aa20■□□□□ 0.79
PTP4A1-201ENST00000370651 UBAC1Q9BSL1 405 aa20■□□□□ 0.79
PTP4A1-201ENST00000370651 SPG7Q9UQ90 795 aa20■□□□□ 0.79
PTP4A1-201ENST00000370651 C8orf76Q96K31 380 aa20■□□□□ 0.79
PTP4A1-201ENST00000370651 KIF4BQ2VIQ3 1234 aa20■□□□□ 0.79
PTP4A1-201ENST00000370651 EMILIN1Q9Y6C2 1016 aa20■□□□□ 0.79
PTP4A1-201ENST00000370651 IFT140Q96RY7 1462 aa20■□□□□ 0.79
PTP4A1-201ENST00000370651 ABCA10Q8WWZ4 1543 aa20■□□□□ 0.79
PTP4A1-201ENST00000370651 POLR3GO15318 223 aaPredicted RBP20■□□□□ 0.79
PTP4A1-201ENST00000370651 RBM42Q9BTD8 480 aaKnown RBP20■□□□□ 0.79
PTP4A1-201ENST00000370651 ADGRF5Q8IZF2 1346 aa20■□□□□ 0.79
PTP4A1-201ENST00000370651 MAGI1Q96QZ7 1491 aaPredicted RBP19.99■□□□□ 0.79
PTP4A1-201ENST00000370651 CAVIN2O95810 425 aa19.99■□□□□ 0.79
PTP4A1-201ENST00000370651 HMGB1P09429 215 aaKnown RBP19.99■□□□□ 0.79
PTP4A1-201ENST00000370651 NOLC1Q14978 699 aaKnown RBP eCLIP19.99■□□□□ 0.79
PTP4A1-201ENST00000370651 SAMD1Q6SPF0 538 aaPredicted RBP19.99■□□□□ 0.79
PTP4A1-201ENST00000370651 CEP131Q9UPN4 1083 aa19.99■□□□□ 0.79
PTP4A1-201ENST00000370651 GOLGA6L7A0A1B0GV03 622 aa19.99■□□□□ 0.79
PTP4A1-201ENST00000370651 NSD2O96028 1365 aa19.99■□□□□ 0.79
PTP4A1-201ENST00000370651 JAKMIP3Q5VZ66 844 aa19.99■□□□□ 0.79
PTP4A1-201ENST00000370651 FSIP1Q8NA03 581 aa19.99■□□□□ 0.79
PTP4A1-201ENST00000370651 PARD3Q8TEW0 1356 aa19.99■□□□□ 0.79
PTP4A1-201ENST00000370651 GUCY1B3Q02153 619 aa19.99■□□□□ 0.79
PTP4A1-201ENST00000370651 STX1AQ16623 288 aa19.99■□□□□ 0.79
PTP4A1-201ENST00000370651 TDO2P48775 406 aa19.98■□□□□ 0.79
PTP4A1-201ENST00000370651 SYCP1Q15431 976 aa19.98■□□□□ 0.79
PTP4A1-201ENST00000370651 TAF7Q15545 349 aaPredicted RBP19.98■□□□□ 0.79
PTP4A1-201ENST00000370651 PAXBP1Q9Y5B6 917 aa19.98■□□□□ 0.79
PTP4A1-201ENST00000370651 GIMAP6Q6P9H5 292 aa19.98■□□□□ 0.79
PTP4A1-201ENST00000370651 IQGAP2Q13576 1575 aa19.98■□□□□ 0.79
PTP4A1-201ENST00000370651 SDSP20132 328 aa19.98■□□□□ 0.79
PTP4A1-201ENST00000370651 ARHGAP45Q92619 1136 aa19.98■□□□□ 0.79
PTP4A1-201ENST00000370651 SNAPC4Q5SXM2 1469 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms