RNA–Protein interactions for RNA: ENSMUST00000223065.1

Trim27-207, Transcript of Zinc finger protein RFP, mousemouse

TSL 1 (best) BASIC

Gene Trim27, Length 2,046 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-207ENSMUST00000223065 Dixdc1Q80Y83 711 aa26.31■■□□□ 1.8
Trim27-207ENSMUST00000223065 CenppQ9CZ92 286 aa26.31■■□□□ 1.8
Trim27-207ENSMUST00000223065 Atf3Q60765 181 aa26.31■■□□□ 1.8
Trim27-207ENSMUST00000223065 CoilQ5SU73 570 aa26.29■■□□□ 1.8
Trim27-207ENSMUST00000223065 Smarca5Q91ZW3 1051 aaKnown RBP26.29■■□□□ 1.8
Trim27-207ENSMUST00000223065 Simc1E9Q6E9 1354 aa26.29■■□□□ 1.8
Trim27-207ENSMUST00000223065 Col15a1O35206 1367 aa26.29■■□□□ 1.8
Trim27-207ENSMUST00000223065 Hspa1lP16627 641 aa26.29■■□□□ 1.8
Trim27-207ENSMUST00000223065 Atg4a-psA0A0G2JFS9 396 aa26.28■■□□□ 1.8
Trim27-207ENSMUST00000223065 Gm10093D3YYI8 482 aa26.28■■□□□ 1.8
Trim27-207ENSMUST00000223065 Hdac1O09106 482 aaKnown RBP26.28■■□□□ 1.8
Trim27-207ENSMUST00000223065 Nkx2-3P97334 362 aa26.28■■□□□ 1.8
Trim27-207ENSMUST00000223065 Atg4aQ8C9S8 396 aa26.28■■□□□ 1.8
Trim27-207ENSMUST00000223065 Stk36Q69ZM6 1316 aa26.28■■□□□ 1.8
Trim27-207ENSMUST00000223065 Btbd11Q6GQW0 1109 aa26.27■■□□□ 1.8
Trim27-207ENSMUST00000223065 TkfcQ8VC30 578 aa26.27■■□□□ 1.8
Trim27-207ENSMUST00000223065 Cyp2d11P24457 504 aa26.27■■□□□ 1.8
Trim27-207ENSMUST00000223065 Fbxo41Q6NS60 873 aa26.27■■□□□ 1.8
Trim27-207ENSMUST00000223065 ScaperF8VQ70 1398 aaKnown RBP26.27■■□□□ 1.8
Trim27-207ENSMUST00000223065 Anapc15-psA0A140T8L6 141 aa26.26■■□□□ 1.79
Trim27-207ENSMUST00000223065 Cc2d1aQ8K1A6 943 aa26.26■■□□□ 1.79
Trim27-207ENSMUST00000223065 Col1a2Q01149 1372 aa26.26■■□□□ 1.79
Trim27-207ENSMUST00000223065 Atp8b2P98199 1209 aa26.25■■□□□ 1.79
Trim27-207ENSMUST00000223065 Arhgef1Q61210 920 aaKnown RBP26.25■■□□□ 1.79
Trim27-207ENSMUST00000223065 Gm10471E9Q1C7 252 aa26.24■■□□□ 1.79
Trim27-207ENSMUST00000223065 Srgap3Q812A2 1099 aa26.24■■□□□ 1.79
Trim27-207ENSMUST00000223065 Ppp1r42Q8R1Z4 357 aa26.24■■□□□ 1.79
Trim27-207ENSMUST00000223065 Irx6Q9ER75 438 aa26.24■■□□□ 1.79
Trim27-207ENSMUST00000223065 Cyp46a1Q9WVK8 500 aa26.24■■□□□ 1.79
Trim27-207ENSMUST00000223065 Ddx17Q501J6 650 aaKnown RBP26.23■■□□□ 1.79
Trim27-207ENSMUST00000223065 OptnQ8K3K8 584 aa26.23■■□□□ 1.79
Trim27-207ENSMUST00000223065 Nphp1Q9QY53 687 aa26.23■■□□□ 1.79
Trim27-207ENSMUST00000223065 Gm21698A0A087WQP8 267 aa26.22■■□□□ 1.79
Trim27-207ENSMUST00000223065 Gm21671G3UY31 267 aa26.22■■□□□ 1.79
Trim27-207ENSMUST00000223065 Htatsf1Q8BGC0 757 aa26.22■■□□□ 1.79
Trim27-207ENSMUST00000223065 Bcl11bQ99PV8 884 aa26.21■■□□□ 1.79
Trim27-207ENSMUST00000223065 Echdc1Q9D9V3 322 aa26.21■■□□□ 1.79
Trim27-207ENSMUST00000223065 Mmp8O70138 465 aa26.21■■□□□ 1.79
Trim27-207ENSMUST00000223065 Card10P58660 1021 aa26.21■■□□□ 1.79
Trim27-207ENSMUST00000223065 Terf2O35144 541 aa26.2■■□□□ 1.78
Trim27-207ENSMUST00000223065 Atg3Q9CPX6 314 aa26.2■■□□□ 1.78
Trim27-207ENSMUST00000223065 BcorQ8CGN4 1759 aa26.2■■□□□ 1.78
Trim27-207ENSMUST00000223065 DaxxO35613 739 aa26.19■■□□□ 1.78
Trim27-207ENSMUST00000223065 CrklP47941 303 aa26.19■■□□□ 1.78
Trim27-207ENSMUST00000223065 ThemisQ8BGW0 636 aa26.19■■□□□ 1.78
Trim27-207ENSMUST00000223065 Fkbp4P30416 458 aa26.19■■□□□ 1.78
Trim27-207ENSMUST00000223065 Tfip11Q9ERA6 838 aaKnown RBP26.19■■□□□ 1.78
Trim27-207ENSMUST00000223065 PsapQ61207 557 aaKnown RBP26.18■■□□□ 1.78
Trim27-207ENSMUST00000223065 Pdia3P27773 505 aaKnown RBP26.17■■□□□ 1.78
Trim27-207ENSMUST00000223065 GorabQ8BRM2 368 aa26.17■■□□□ 1.78
Trim27-207ENSMUST00000223065 Ppp6r3Q922D4 844 aa26.17■■□□□ 1.78
Trim27-207ENSMUST00000223065 Catsper2A2ARP9 588 aa26.17■■□□□ 1.78
Trim27-207ENSMUST00000223065 Pdzd9Q9D9M4 266 aa26.17■■□□□ 1.78
Trim27-207ENSMUST00000223065 Cwc27Q3TKY6 469 aa26.16■■□□□ 1.78
Trim27-207ENSMUST00000223065 Tmem119Q8R138 280 aa26.16■■□□□ 1.78
Trim27-207ENSMUST00000223065 Nucb1Q02819 459 aaKnown RBP26.15■■□□□ 1.78
Trim27-207ENSMUST00000223065 GckrQ91X44 587 aa26.15■■□□□ 1.78
Trim27-207ENSMUST00000223065 Bend3Q6PAL0 825 aa26.14■■□□□ 1.78
Trim27-207ENSMUST00000223065 Ppip5k2Q6ZQB6 1129 aa26.14■■□□□ 1.77
Trim27-207ENSMUST00000223065 Ccdc9Q8VC31 543 aaKnown RBP26.14■■□□□ 1.77
Trim27-207ENSMUST00000223065 Mcmdc2E9Q956 681 aa26.13■■□□□ 1.77
Trim27-207ENSMUST00000223065 Pdlim2Q8R1G6 349 aa26.13■■□□□ 1.77
Trim27-207ENSMUST00000223065 Bcar3Q9QZK2 820 aa26.13■■□□□ 1.77
Trim27-207ENSMUST00000223065 Brinp3Q499E0 766 aa26.12■■□□□ 1.77
Trim27-207ENSMUST00000223065 Ccdc155Q80VJ8 648 aa26.12■■□□□ 1.77
Trim27-207ENSMUST00000223065 Phkg2Q9DB30 406 aa26.11■■□□□ 1.77
Trim27-207ENSMUST00000223065 Adcy9P51830 1353 aa26.11■■□□□ 1.77
Trim27-207ENSMUST00000223065 Hoxa7P02830 229 aa26.1■■□□□ 1.77
Trim27-207ENSMUST00000223065 Zap70P43404 618 aa26.1■■□□□ 1.77
Trim27-207ENSMUST00000223065 Zranb3Q6NZP1 1069 aa26.1■■□□□ 1.77
Trim27-207ENSMUST00000223065 Taf7Q9R1C0 341 aa26.1■■□□□ 1.77
Trim27-207ENSMUST00000223065 Exoc6bA6H5Z3 810 aa26.1■■□□□ 1.77
Trim27-207ENSMUST00000223065 Zkscan2G3X952 960 aa26.1■■□□□ 1.77
Trim27-207ENSMUST00000223065 Ier5O89113 308 aa26.09■■□□□ 1.77
Trim27-207ENSMUST00000223065 Bcl2l13P59017 434 aa26.09■■□□□ 1.77
Trim27-207ENSMUST00000223065 Chmp7Q8R1T1 451 aa26.09■■□□□ 1.77
Trim27-207ENSMUST00000223065 Kdm4cQ8VCD7 1054 aa26.09■■□□□ 1.77
Trim27-207ENSMUST00000223065 Tns2Q8CGB6 1400 aa26.08■■□□□ 1.77
Trim27-207ENSMUST00000223065 1700010I14RikQ7TPG0 532 aa26.07■■□□□ 1.76
Trim27-207ENSMUST00000223065 Q9D2X8 372 aa26.07■■□□□ 1.76
Trim27-207ENSMUST00000223065 Atp10bB1AWN4 1474 aa26.07■■□□□ 1.76
Trim27-207ENSMUST00000223065 Bcl9lQ67FY2 1494 aa26.07■■□□□ 1.76
Trim27-207ENSMUST00000223065 Ptpdc1Q6NZK8 747 aa26.07■■□□□ 1.76
Trim27-207ENSMUST00000223065 Tnks1bp1P58871 1720 aa26.07■■□□□ 1.76
Trim27-207ENSMUST00000223065 Cfdp1O88271 295 aaKnown RBP26.06■■□□□ 1.76
Trim27-207ENSMUST00000223065 SympkQ80X82 1284 aa26.06■■□□□ 1.76
Trim27-207ENSMUST00000223065 Mphosph10Q810V0 681 aaKnown RBP26.05■■□□□ 1.76
Trim27-207ENSMUST00000223065 EngaseQ8BX80 734 aa26.05■■□□□ 1.76
Trim27-207ENSMUST00000223065 Antxr1Q9CZ52 562 aa26.05■■□□□ 1.76
Trim27-207ENSMUST00000223065 Flt4P35917 1363 aa26.05■■□□□ 1.76
Trim27-207ENSMUST00000223065 DccP70211 1447 aa26.05■■□□□ 1.76
Trim27-207ENSMUST00000223065 Slit1Q80TR4 1531 aa26.05■■□□□ 1.76
Trim27-207ENSMUST00000223065 Elp1Q7TT37 1333 aaKnown RBP26.05■■□□□ 1.76
Trim27-207ENSMUST00000223065 FocadA2AKG8 1798 aa26.05■■□□□ 1.76
Trim27-207ENSMUST00000223065 Map3k2Q61083 619 aa26.04■■□□□ 1.76
Trim27-207ENSMUST00000223065 RgmbQ7TQ33 436 aa26.04■■□□□ 1.76
Trim27-207ENSMUST00000223065 Rfx1P48377 963 aa26.03■■□□□ 1.76
Trim27-207ENSMUST00000223065 Tlr7P58681 1050 aa26.03■■□□□ 1.76
Trim27-207ENSMUST00000223065 Pdia6Q922R8 440 aaKnown RBP26.03■■□□□ 1.76
Trim27-207ENSMUST00000223065 Iqsec3Q3TES0 1195 aa26.02■■□□□ 1.76
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms