RNA–Protein interactions for RNA: ENSMUST00000210061.1

Clcn4-203, Transcript of H(+)/Cl(-) exchange transporter 4, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clcn4, Length 2,445 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4-203ENSMUST00000210061 Ppp1r42Q8R1Z4 357 aa16.51■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Pank2Q3U4S0 443 aa16.5■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Mmp8O70138 465 aa16.5■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Mum1Q6DID5 682 aa16.5■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Rnf214Q8BFU3 668 aaKnown RBP16.5■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Nol11Q8BJW5 723 aaKnown RBP16.5■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Pik3c2bE9QAN8 1632 aa16.5■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Hsp90b1P08113 802 aaKnown RBP16.49■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Fam83gQ5SWY7 812 aa16.49■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Txndc2Q6P902 515 aa16.49■□□□□ 0.23
Clcn4-203ENSMUST00000210061 EvcP57680 1005 aa16.48■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Pnma3Q8JZW8 466 aa16.48■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Chmp4cQ9D7F7 232 aa16.48■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Gzf1Q4VBD9 706 aa16.48■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Smarce1O54941 411 aaKnown RBP16.47■□□□□ 0.23
Clcn4-203ENSMUST00000210061 E4f1Q8CCE9 783 aa16.47■□□□□ 0.23
Clcn4-203ENSMUST00000210061 PzpQ61838 1495 aa16.47■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Igsf1Q7TQA1 1317 aa16.47■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Atp8b2P98199 1209 aa16.47■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Noc3lQ8VI84 807 aaKnown RBP16.47■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Tnrc6bQ8BKI2 1810 aaKnown RBP16.47■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Msh6P54276 1358 aaKnown RBP16.46■□□□□ 0.23
Clcn4-203ENSMUST00000210061 CemipQ8BI06 1361 aa16.46■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Snap23O09044 210 aa16.46■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Slit2Q9R1B9 1521 aa16.46■□□□□ 0.23
Clcn4-203ENSMUST00000210061 Cpa2Q504N0 417 aa16.46■□□□□ 0.23
Clcn4-203ENSMUST00000210061 FancaQ9JL70 1439 aa16.46■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Znf335A2A5K6 1337 aa16.45■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Ccne1Q61457 408 aa16.45■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Tshz3Q8CGV9 1081 aa16.45■□□□□ 0.22
Clcn4-203ENSMUST00000210061 NgefQ8CHT1 710 aa16.45■□□□□ 0.22
Clcn4-203ENSMUST00000210061 KinQ8K339 391 aa16.45■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Stk36Q69ZM6 1316 aa16.45■□□□□ 0.22
Clcn4-203ENSMUST00000210061 IghaA0A0A6YXW6 389 aa16.45■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Q3TQI7 289 aaKnown RBP16.45■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Sirt1Q923E4 737 aa16.45■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Ccdc7Q9D541 371 aa16.45■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Mcmdc2E9Q956 681 aa16.44■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Hoxa7P02830 229 aa16.44■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Mindy4Q3UQI9 744 aa16.44■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Dip2bQ3UH60 1574 aa16.44■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Strn4P58404 760 aa16.44■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Cwc27Q3TKY6 469 aa16.44■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Utp18Q5SSI6 552 aaKnown RBP16.44■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Ddx19aQ61655 478 aaKnown RBP16.44■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Jakmip1Q8BVL9 626 aa16.44■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Chd1lQ9CXF7 900 aa16.44■□□□□ 0.22
Clcn4-203ENSMUST00000210061 NalcnQ8BXR5 1738 aa16.43■□□□□ 0.22
Clcn4-203ENSMUST00000210061 HnrnpmQ9D0E1 729 aaKnown RBP16.43■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Pdzrn3Q69ZS0 1063 aa16.43■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Foxp4Q9DBY0 795 aaKnown RBP16.43■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Pmfbp1Q9WVQ0 1022 aa16.43■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Tpx2A2APB8 745 aaKnown RBP16.42■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Anp32cQ64G17 123 aa16.42■□□□□ 0.22
Clcn4-203ENSMUST00000210061 RictorQ6QI06 1708 aa16.41■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Elmsan1E9Q2I4 1089 aaKnown RBP16.4■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Ms4a2P20490 235 aa16.4■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Eya1P97767 591 aa16.4■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Tbc1d30Q69ZT9 766 aa16.4■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Ccdc173A0JLY1 547 aa16.4■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Irf5P56477 497 aa16.4■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Ints3Q7TPD0 1041 aaKnown RBP16.4■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Ccar2Q8VDP4 922 aaKnown RBP16.4■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Slx4ipQ9D7Y9 413 aa16.4■□□□□ 0.22
Clcn4-203ENSMUST00000210061 Disp3A3KFU9 1347 aa16.4■□□□□ 0.22
Clcn4-203ENSMUST00000210061 NcapgE9PWG6 1004 aa16.39■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Olfml1Q8BSH2 233 aa16.39■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Parp14Q2EMV9 1817 aa16.39■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Unc5clQ6R653 518 aa16.39■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Fam184aE9PW83 1143 aa16.38■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Trpm3Q5F4S9 1721 aa16.38■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Atf5O70191 283 aa16.38■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Nom1Q3UFM5 854 aaKnown RBP16.38■□□□□ 0.21
Clcn4-203ENSMUST00000210061 N4bp2F8VQG7 1678 aaKnown RBP16.37■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Q3UJC8 639 aa16.37■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Casc1Q6TDU8 730 aa16.37■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Nol12Q8BG17 217 aa16.37■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Rad50P70388 1312 aa16.37■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Wdr93Q402B2 695 aa16.36■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Pnpla7A2AJ88 1352 aa16.36■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Ubr1O70481 1757 aa16.36■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Bach2P97303 839 aa16.36■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Tbc1d31Q6NXY1 996 aa16.36■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Mlh1Q9JK91 760 aa16.36■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Slit3Q9WVB4 1523 aa16.36■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Larp1bA0A0A6YXJ7 370 aaKnown RBP16.35■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Chpf2Q3UU43 768 aa16.35■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Dennd6aQ8BH65 605 aa16.35■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Ptpn23Q6PB44 1692 aa16.35■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Ier5O89113 308 aa16.35■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Ppp1r18Q8BQ30 594 aa16.35■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Cabp4Q8VHC5 271 aa16.35■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Myo5bP21271 1818 aa16.35■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Brpf1B2RRD7 1212 aa16.34■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Bms1Q6PGF5 1284 aaKnown RBP16.34■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Camta1A2A891 1682 aa16.34■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Pik3c2aQ61194 1686 aa16.34■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Wdr78E9PYY5 807 aa16.34■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Gjb2Q00977 226 aa16.34■□□□□ 0.21
Clcn4-203ENSMUST00000210061 Cyp2d12Q8BVD2 504 aa16.34■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms